RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 CCDC88CQ9P219 2028 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 IGHV3-72A0A0B4J1Y9 119 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 FAM24AA6NFZ4 105 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 HRASP01112 189 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 PF4V1P10720 104 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 NID1P14543 1247 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 AVPR2P30518 371 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 GALNSP34059 522 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 TWIST1Q15672 202 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 RPEL1Q2QD12 228 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 TMEM102Q8N9M5 508 aaPredicted RBP11.11□□□□□ -0.63
CHD3-203ENST00000380358 LAT2Q9GZY6 243 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 TUBA4BQ9H853 241 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 THYN1Q9P016 225 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 CD37P11049 281 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 COMPP49747 757 aaPredicted RBP11.11□□□□□ -0.63
CHD3-203ENST00000380358 FUT6P51993 359 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 PDPNQ86YL7 162 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 EIF4E3Q8N5X7 224 aaKnown RBP11.11□□□□□ -0.63
CHD3-203ENST00000380358 KLHDC1Q8N7A1 406 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 OR13C6PQ8NH95 151 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 ZNF629Q9UEG4 869 aaPredicted RBP11.11□□□□□ -0.63
CHD3-203ENST00000380358 NFAT5O94916 1531 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 TPRP12270 2363 aaKnown RBP11.11□□□□□ -0.63
CHD3-203ENST00000380358 TTC3P53804 2025 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 LDLRAD1Q5T700 205 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 SPANXN1Q5VSR9 72 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 ZNF441Q8N8Z8 693 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 MBLAC1A4D2B0 266 aaPredicted RBP11.11□□□□□ -0.63
CHD3-203ENST00000380358 FZD5Q13467 585 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 FZD2Q14332 565 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 TMEM52BQ4KMG9 183 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 FAM78BQ5VT40 261 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 DYNC2LI1Q8TCX1 351 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 BCL7CQ8WUZ0 217 aaPredicted RBP11.11□□□□□ -0.63
CHD3-203ENST00000380358 VN1R1Q9GZP7 353 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 A0A1W2PN81 502 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 ARNTLO00327 626 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 RER1O15258 196 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 BRS3P32247 399 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 UQCRFS1P47985 274 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 OR10A7Q8NGE5 316 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 KLK11Q9UBX7 282 aa11.11□□□□□ -0.63
CHD3-203ENST00000380358 TCRBV3S1A0A5B6 114 aa11.1□□□□□ -0.63
CHD3-203ENST00000380358 DHHO43323 396 aa11.1□□□□□ -0.63
CHD3-203ENST00000380358 ATF1P18846 271 aa11.1□□□□□ -0.63
CHD3-203ENST00000380358 MIDNQ504T8 468 aa11.1□□□□□ -0.63
CHD3-203ENST00000380358 LYRM7Q5U5X0 104 aa11.1□□□□□ -0.63
CHD3-203ENST00000380358 C6orf201Q7Z4U5 140 aa11.1□□□□□ -0.63
CHD3-203ENST00000380358 C1orf210Q8IVY1 113 aa11.1□□□□□ -0.63
CHD3-203ENST00000380358 SAP30LQ9HAJ7 183 aa11.1□□□□□ -0.63
CHD3-203ENST00000380358 HERVK_113P61574 105 aa11.1□□□□□ -0.63
CHD3-203ENST00000380358 ZBTB44Q8NCP5 570 aa11.1□□□□□ -0.63
CHD3-203ENST00000380358 OR8G5Q8NG78 346 aa11.1□□□□□ -0.63
CHD3-203ENST00000380358 SGMS2Q8NHU3 365 aa11.1□□□□□ -0.63
CHD3-203ENST00000380358 VAMP5O95183 116 aa11.1□□□□□ -0.63
CHD3-203ENST00000380358 CEACAM3P40198 252 aa11.1□□□□□ -0.63
CHD3-203ENST00000380358 OR1L1Q8NH94 360 aa11.1□□□□□ -0.63
CHD3-203ENST00000380358 RHOXF1Q8NHV9 184 aa11.1□□□□□ -0.63
CHD3-203ENST00000380358 PPP1R1CQ8WVI7 109 aa11.1□□□□□ -0.63
CHD3-203ENST00000380358 APOBEC3DQ96AK3 386 aaPredicted RBP11.1□□□□□ -0.63
CHD3-203ENST00000380358 DERL3Q96Q80 235 aa11.1□□□□□ -0.63
CHD3-203ENST00000380358 INSIG2Q9Y5U4 225 aa11.1□□□□□ -0.63
CHD3-203ENST00000380358 TMEM211Q6ICI0 200 aa11.1□□□□□ -0.63
CHD3-203ENST00000380358 OR2D3Q8NGH3 330 aa11.1□□□□□ -0.63
CHD3-203ENST00000380358 KCTD12Q96CX2 325 aaKnown RBP11.1□□□□□ -0.63
CHD3-203ENST00000380358 MEGF10Q96KG7 1140 aa11.1□□□□□ -0.63
CHD3-203ENST00000380358 NEURL2Q9BR09 285 aa11.1□□□□□ -0.63
CHD3-203ENST00000380358 LRRC61Q9BV99 259 aa11.1□□□□□ -0.63
CHD3-203ENST00000380358 A0A0B4J293 547 aa11.1□□□□□ -0.63
CHD3-203ENST00000380358 FGF2P09038 288 aa11.1□□□□□ -0.63
CHD3-203ENST00000380358 IL11RAQ14626 422 aa11.1□□□□□ -0.63
CHD3-203ENST00000380358 PTPRZ1P23471 2315 aaPredicted RBP11.1□□□□□ -0.63
CHD3-203ENST00000380358 RAB29O14966 203 aa11.1□□□□□ -0.63
CHD3-203ENST00000380358 ZNF737O75373 536 aa11.1□□□□□ -0.63
CHD3-203ENST00000380358 PPP1R17O96001 155 aa11.1□□□□□ -0.63
CHD3-203ENST00000380358 NMUP48645 174 aa11.1□□□□□ -0.63
CHD3-203ENST00000380358 SLC38A11Q08AI6 406 aa11.1□□□□□ -0.63
CHD3-203ENST00000380358 ANKRD55Q3KP44 614 aa11.1□□□□□ -0.63
CHD3-203ENST00000380358 MFNGO00587 321 aa11.09□□□□□ -0.63
CHD3-203ENST00000380358 CST4P01036 141 aa11.09□□□□□ -0.63
CHD3-203ENST00000380358 ETV6P41212 452 aa11.09□□□□□ -0.63
CHD3-203ENST00000380358 PPP1CAP62136 330 aa11.09□□□□□ -0.63
CHD3-203ENST00000380358 OIT3Q8WWZ8 545 aa11.09□□□□□ -0.63
CHD3-203ENST00000380358 LTN1O94822 1766 aa11.09□□□□□ -0.63
CHD3-203ENST00000380358 UBE2L3P68036 154 aaKnown RBP11.09□□□□□ -0.63
CHD3-203ENST00000380358 SPRED3Q2MJR0 410 aa11.09□□□□□ -0.63
CHD3-203ENST00000380358 MYOZ3Q8TDC0 251 aa11.09□□□□□ -0.63
CHD3-203ENST00000380358 EVA1AQ9H8M9 152 aa11.09□□□□□ -0.63
CHD3-203ENST00000380358 GNG3P63215 75 aa11.09□□□□□ -0.63
CHD3-203ENST00000380358 MRPL54Q6P161 138 aaKnown RBP11.09□□□□□ -0.63
CHD3-203ENST00000380358 STAC2Q6ZMT1 411 aa11.09□□□□□ -0.63
CHD3-203ENST00000380358 OR13G1Q8NGZ3 307 aa11.09□□□□□ -0.63
CHD3-203ENST00000380358 OR10D3Q8NH80 312 aa11.09□□□□□ -0.63
CHD3-203ENST00000380358 REPIN1Q9BWE0 567 aaKnown RBP11.09□□□□□ -0.63
CHD3-203ENST00000380358 GON7Q9BXV9 100 aa11.09□□□□□ -0.63
CHD3-203ENST00000380358 PSMB11A5LHX3 300 aa11.09□□□□□ -0.63
CHD3-203ENST00000380358 ZNF117Q03924 483 aa11.09□□□□□ -0.63
CHD3-203ENST00000380358 HERPUD1Q15011 391 aa11.09□□□□□ -0.63
CHD3-203ENST00000380358 ATP6V1FQ16864 119 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms