RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 TMEM205Q6UW68 189 aa13.69□□□□□ -0.22
FXN-201ENST00000377270 TXN2Q99757 166 aa13.69□□□□□ -0.22
FXN-201ENST00000377270 THADAQ6YHU6 1953 aa13.68□□□□□ -0.22
FXN-201ENST00000377270 A0A1W2PR77 199 aa13.68□□□□□ -0.22
FXN-201ENST00000377270 OR5G3P0C626 314 aa13.68□□□□□ -0.22
FXN-201ENST00000377270 CEBPGP53567 150 aa13.68□□□□□ -0.22
FXN-201ENST00000377270 STPG4Q8N801 248 aa13.68□□□□□ -0.22
FXN-201ENST00000377270 TMEM234Q8WY98 164 aa13.68□□□□□ -0.22
FXN-201ENST00000377270 PARP12Q9H0J9 701 aaKnown RBP13.68□□□□□ -0.22
FXN-201ENST00000377270 SLC35B3Q9H1N7 401 aa13.68□□□□□ -0.22
FXN-201ENST00000377270 HIPK2Q9H2X6 1198 aa13.68□□□□□ -0.22
FXN-201ENST00000377270 PNO1Q9NRX1 252 aaKnown RBP13.68□□□□□ -0.22
FXN-201ENST00000377270 HEATR5AQ86XA9 2040 aa13.68□□□□□ -0.22
FXN-201ENST00000377270 METTL12A8MUP2 240 aa13.68□□□□□ -0.22
FXN-201ENST00000377270 SERPINE3A8MV23 424 aa13.68□□□□□ -0.22
FXN-201ENST00000377270 ONECUT2O95948 504 aa13.68□□□□□ -0.22
FXN-201ENST00000377270 AMY2AP04746 511 aa13.68□□□□□ -0.22
FXN-201ENST00000377270 CSRP1P21291 193 aaKnown RBP13.68□□□□□ -0.22
FXN-201ENST00000377270 GLRA1P23415 457 aa13.68□□□□□ -0.22
FXN-201ENST00000377270 FPR2P25090 351 aa13.68□□□□□ -0.22
FXN-201ENST00000377270 SLC6A9P48067 706 aa13.68□□□□□ -0.22
FXN-201ENST00000377270 EFNB2P52799 333 aa13.68□□□□□ -0.22
FXN-201ENST00000377270 GGTLC2Q14390 218 aa13.68□□□□□ -0.22
FXN-201ENST00000377270 Q499Y3 187 aa13.68□□□□□ -0.22
FXN-201ENST00000377270 Q6ZVH6 145 aa13.68□□□□□ -0.22
FXN-201ENST00000377270 MED25Q71SY5 747 aa13.68□□□□□ -0.22
FXN-201ENST00000377270 TDHQ8IZJ6 230 aa13.68□□□□□ -0.22
FXN-201ENST00000377270 FKBP11Q9NYL4 201 aa13.68□□□□□ -0.22
FXN-201ENST00000377270 PLA2G2EQ9NZK7 142 aa13.68□□□□□ -0.22
FXN-201ENST00000377270 LOC100289279A0A1B0GTE1 492 aa13.67□□□□□ -0.22
FXN-201ENST00000377270 XKRY2A2RUG3 117 aa13.67□□□□□ -0.22
FXN-201ENST00000377270 AQP7P3A6NL99 342 aa13.67□□□□□ -0.22
FXN-201ENST00000377270 CLPSP04118 112 aa13.67□□□□□ -0.22
FXN-201ENST00000377270 CHATP28329 748 aa13.67□□□□□ -0.22
FXN-201ENST00000377270 PMS2P11Q13670 270 aa13.67□□□□□ -0.22
FXN-201ENST00000377270 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.67□□□□□ -0.22
FXN-201ENST00000377270 SMIM21Q3B7S5 101 aa13.67□□□□□ -0.22
FXN-201ENST00000377270 MIDNQ504T8 468 aa13.67□□□□□ -0.22
FXN-201ENST00000377270 ZSCAN4Q8NAM6 433 aaPredicted RBP13.67□□□□□ -0.22
FXN-201ENST00000377270 TMEM229BQ8NBD8 167 aa13.67□□□□□ -0.22
FXN-201ENST00000377270 GPX8Q8TED1 209 aa13.67□□□□□ -0.22
FXN-201ENST00000377270 ZNF48Q96MX3 618 aaPredicted RBP13.67□□□□□ -0.22
FXN-201ENST00000377270 NMNAT3Q96T66 252 aa13.67□□□□□ -0.22
FXN-201ENST00000377270 CDV3Q9UKY7 258 aaKnown RBP13.67□□□□□ -0.22
FXN-201ENST00000377270 LAMA1P25391 3075 aa13.67□□□□□ -0.22
FXN-201ENST00000377270 TLCD2A6NGC4 264 aa13.67□□□□□ -0.22
FXN-201ENST00000377270 IFNL4K9M1U5 179 aa13.67□□□□□ -0.22
FXN-201ENST00000377270 M0QYG6 137 aa13.67□□□□□ -0.22
FXN-201ENST00000377270 OR5H8P0DN80 308 aa13.67□□□□□ -0.22
FXN-201ENST00000377270 CEACAM1P13688 526 aa13.67□□□□□ -0.22
FXN-201ENST00000377270 MC5RP33032 325 aa13.67□□□□□ -0.22
FXN-201ENST00000377270 SLAQ13239 276 aa13.67□□□□□ -0.22
FXN-201ENST00000377270 FBLN7Q53RD9 439 aa13.67□□□□□ -0.22
FXN-201ENST00000377270 STXBP6Q8NFX7 210 aa13.67□□□□□ -0.22
FXN-201ENST00000377270 RAB39BQ96DA2 213 aa13.67□□□□□ -0.22
FXN-201ENST00000377270 GNRHR2Q96P88 292 aa13.67□□□□□ -0.22
FXN-201ENST00000377270 VAX2Q9UIW0 290 aa13.67□□□□□ -0.22
FXN-201ENST00000377270 PCDH15Q96QU1 1955 aa13.67□□□□□ -0.22
FXN-201ENST00000377270 IGHV2-70DA0A0C4DH43 119 aa13.66□□□□□ -0.22
FXN-201ENST00000377270 MSGN1A6NI15 193 aa13.66□□□□□ -0.22
FXN-201ENST00000377270 EEF1E1-BLOC1S5C9J1V9 151 aa13.66□□□□□ -0.22
FXN-201ENST00000377270 H0YIG0 161 aa13.66□□□□□ -0.22
FXN-201ENST00000377270 SCGB1D2O95969 90 aa13.66□□□□□ -0.22
FXN-201ENST00000377270 MAS1P04201 325 aa13.66□□□□□ -0.22
FXN-201ENST00000377270 MDKP21741 143 aaPredicted RBP13.66□□□□□ -0.22
FXN-201ENST00000377270 OR1D4P47884 311 aa13.66□□□□□ -0.22
FXN-201ENST00000377270 SOX2P48431 317 aa13.66□□□□□ -0.22
FXN-201ENST00000377270 LYPD6BQ8NI32 183 aa13.66□□□□□ -0.22
FXN-201ENST00000377270 PTPMT1Q8WUK0 201 aaPredicted RBP13.66□□□□□ -0.22
FXN-201ENST00000377270 ZNRF4Q8WWF5 429 aa13.66□□□□□ -0.22
FXN-201ENST00000377270 KCNE4Q8WWG9 221 aa13.66□□□□□ -0.22
FXN-201ENST00000377270 CUTCQ9NTM9 273 aa13.66□□□□□ -0.22
FXN-201ENST00000377270 MYO15AQ9UKN7 3530 aa13.66□□□□□ -0.22
FXN-201ENST00000377270 A0A087WV48 116 aa13.66□□□□□ -0.22
FXN-201ENST00000377270 ZNF705FA8MVS1 300 aaPredicted RBP13.66□□□□□ -0.22
FXN-201ENST00000377270 K7EPK0 472 aa13.66□□□□□ -0.22
FXN-201ENST00000377270 ZNF705DP0CH99 300 aaPredicted RBP13.66□□□□□ -0.22
FXN-201ENST00000377270 ZNF705BP0CI00 300 aaPredicted RBP13.66□□□□□ -0.22
FXN-201ENST00000377270 ZBTB25P24278 435 aa13.66□□□□□ -0.22
FXN-201ENST00000377270 CD226Q15762 336 aa13.66□□□□□ -0.22
FXN-201ENST00000377270 SOHLH1Q5JUK2 328 aa13.66□□□□□ -0.22
FXN-201ENST00000377270 FDX2Q6P4F2 183 aa13.66□□□□□ -0.22
FXN-201ENST00000377270 LYG2Q86SG7 212 aa13.66□□□□□ -0.22
FXN-201ENST00000377270 FAM71E2Q8N5Q1 922 aa13.66□□□□□ -0.22
FXN-201ENST00000377270 OR51D1Q8NGF3 324 aa13.66□□□□□ -0.22
FXN-201ENST00000377270 ZNF596Q8TC21 504 aa13.66□□□□□ -0.22
FXN-201ENST00000377270 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.66□□□□□ -0.22
FXN-201ENST00000377270 BCL2L2Q92843 193 aaPredicted RBP13.66□□□□□ -0.22
FXN-201ENST00000377270 CNTD2Q9H8S5 307 aa13.66□□□□□ -0.22
FXN-201ENST00000377270 NAGKQ9UJ70 344 aa13.66□□□□□ -0.22
FXN-201ENST00000377270 OR10J1P30954 320 aa13.65□□□□□ -0.22
FXN-201ENST00000377270 MMP16P51512 607 aa13.65□□□□□ -0.22
FXN-201ENST00000377270 TAF9Q16594 264 aa13.65□□□□□ -0.22
FXN-201ENST00000377270 TMEM241Q24JQ0 296 aa13.65□□□□□ -0.22
FXN-201ENST00000377270 ELOA3BQ3SY89 546 aa13.65□□□□□ -0.22
FXN-201ENST00000377270 ZNF440Q8IYI8 595 aa13.65□□□□□ -0.22
FXN-201ENST00000377270 COMMD1Q8N668 190 aa13.65□□□□□ -0.22
FXN-201ENST00000377270 NPEPL1Q8NDH3 523 aa13.65□□□□□ -0.22
FXN-201ENST00000377270 ELOA3Q8NG57 546 aa13.65□□□□□ -0.22
FXN-201ENST00000377270 CPT1CQ8TCG5 803 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms