RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 HGFACQ04756 655 aa11.52□□□□□ -0.57
ACTN1-202ENST00000376839 PPA1Q15181 289 aa11.52□□□□□ -0.57
ACTN1-202ENST00000376839 SWI5Q1ZZU3 235 aa11.52□□□□□ -0.57
ACTN1-202ENST00000376839 Q6ZSR3 168 aa11.52□□□□□ -0.57
ACTN1-202ENST00000376839 FOXL2NBQ6ZUU3 175 aa11.52□□□□□ -0.57
ACTN1-202ENST00000376839 SKA3Q8IX90 412 aa11.52□□□□□ -0.57
ACTN1-202ENST00000376839 LYPD6BQ8NI32 183 aa11.52□□□□□ -0.57
ACTN1-202ENST00000376839 DNASE2BQ8WZ79 361 aa11.52□□□□□ -0.57
ACTN1-202ENST00000376839 ZNF576Q9H609 170 aa11.52□□□□□ -0.57
ACTN1-202ENST00000376839 NXT1Q9UKK6 140 aaKnown RBP11.52□□□□□ -0.57
ACTN1-202ENST00000376839 FRYLO94915 3013 aa11.52□□□□□ -0.57
ACTN1-202ENST00000376839 CACNA1EQ15878 2313 aa11.51□□□□□ -0.57
ACTN1-202ENST00000376839 IGHV5-10-1A0A0J9YXX1 117 aa11.51□□□□□ -0.57
ACTN1-202ENST00000376839 ZNF850A8MQ14 1090 aa11.51□□□□□ -0.57
ACTN1-202ENST00000376839 NPIPA2E9PIF3 369 aa11.51□□□□□ -0.57
ACTN1-202ENST00000376839 NPIPA3F8WFD2 350 aa11.51□□□□□ -0.57
ACTN1-202ENST00000376839 FXYD4P59646 89 aa11.51□□□□□ -0.57
ACTN1-202ENST00000376839 MIDNQ504T8 468 aa11.51□□□□□ -0.57
ACTN1-202ENST00000376839 RAET1LQ5VY80 246 aa11.51□□□□□ -0.57
ACTN1-202ENST00000376839 RTL6Q6ICC9 239 aa11.51□□□□□ -0.57
ACTN1-202ENST00000376839 LYZL2Q7Z4W2 148 aa11.51□□□□□ -0.57
ACTN1-202ENST00000376839 USB1Q9BQ65 265 aaKnown RBP11.51□□□□□ -0.57
ACTN1-202ENST00000376839 SMCO4Q9NRQ5 59 aa11.51□□□□□ -0.57
ACTN1-202ENST00000376839 SHANK1Q9Y566 2161 aa11.51□□□□□ -0.57
ACTN1-202ENST00000376839 MASP2O00187 686 aa11.51□□□□□ -0.57
ACTN1-202ENST00000376839 CCL3P10147 92 aa11.51□□□□□ -0.57
ACTN1-202ENST00000376839 MEOX2P50222 304 aa11.51□□□□□ -0.57
ACTN1-202ENST00000376839 FAM3AP98173 230 aa11.51□□□□□ -0.57
ACTN1-202ENST00000376839 TMEM187Q14656 261 aa11.51□□□□□ -0.57
ACTN1-202ENST00000376839 TGIF1Q15583 401 aa11.51□□□□□ -0.57
ACTN1-202ENST00000376839 PHLDA2Q53GA4 152 aa11.51□□□□□ -0.57
ACTN1-202ENST00000376839 PLXDC2Q6UX71 529 aa11.51□□□□□ -0.57
ACTN1-202ENST00000376839 ZIC4Q8N9L1 334 aa11.51□□□□□ -0.57
ACTN1-202ENST00000376839 UBAC2Q8NBM4 344 aa11.51□□□□□ -0.57
ACTN1-202ENST00000376839 REEP6Q96HR9 211 aa11.51□□□□□ -0.57
ACTN1-202ENST00000376839 ULBP2Q9BZM5 246 aa11.51□□□□□ -0.57
ACTN1-202ENST00000376839 NAA60Q9H7X0 242 aa11.51□□□□□ -0.57
ACTN1-202ENST00000376839 RNF122Q9H9V4 155 aa11.51□□□□□ -0.57
ACTN1-202ENST00000376839 TIMM10BQ9Y5J6 103 aa11.51□□□□□ -0.57
ACTN1-202ENST00000376839 C1QL1O75973 258 aa11.5□□□□□ -0.57
ACTN1-202ENST00000376839 NR2C1P13056 603 aa11.5□□□□□ -0.57
ACTN1-202ENST00000376839 PCOLCEQ15113 449 aa11.5□□□□□ -0.57
ACTN1-202ENST00000376839 RSU1Q15404 277 aa11.5□□□□□ -0.57
ACTN1-202ENST00000376839 RTN4IP1Q8WWV3 396 aaPredicted RBP11.5□□□□□ -0.57
ACTN1-202ENST00000376839 CCDC74BQ96LY2 380 aa11.5□□□□□ -0.57
ACTN1-202ENST00000376839 JSRP1Q96MG2 331 aaPredicted RBP11.5□□□□□ -0.57
ACTN1-202ENST00000376839 METTL9Q9H1A3 318 aa11.5□□□□□ -0.57
ACTN1-202ENST00000376839 C19orf25Q9UFG5 118 aaPredicted RBP11.5□□□□□ -0.57
ACTN1-202ENST00000376839 FOXD3Q9UJU5 478 aaPredicted RBP11.5□□□□□ -0.57
ACTN1-202ENST00000376839 ZDHHC8Q9ULC8 765 aa11.5□□□□□ -0.57
ACTN1-202ENST00000376839 LY6G6EA0A0G2JKS1 128 aa11.5□□□□□ -0.57
ACTN1-202ENST00000376839 MED19A0JLT2 244 aaPredicted RBP11.5□□□□□ -0.57
ACTN1-202ENST00000376839 TP53I11O14683 189 aa11.5□□□□□ -0.57
ACTN1-202ENST00000376839 TSPAN15O95858 294 aa11.5□□□□□ -0.57
ACTN1-202ENST00000376839 ZNF728P0DKX0 622 aa11.5□□□□□ -0.57
ACTN1-202ENST00000376839 IGFBP4P22692 258 aa11.5□□□□□ -0.57
ACTN1-202ENST00000376839 ZNF616Q08AN1 781 aa11.5□□□□□ -0.57
ACTN1-202ENST00000376839 PIGYQ3MUY2 71 aa11.5□□□□□ -0.57
ACTN1-202ENST00000376839 TMEM156Q8N614 296 aa11.5□□□□□ -0.57
ACTN1-202ENST00000376839 SPTSSAQ969W0 71 aa11.5□□□□□ -0.57
ACTN1-202ENST00000376839 SCRT1Q9BWW7 348 aa11.5□□□□□ -0.57
ACTN1-202ENST00000376839 RPS10P5Q9NQ39 176 aa11.5□□□□□ -0.57
ACTN1-202ENST00000376839 FBXO9Q9UK97 447 aaPredicted RBP11.5□□□□□ -0.57
ACTN1-202ENST00000376839 STARD10Q9Y365 291 aa11.5□□□□□ -0.57
ACTN1-202ENST00000376839 POMT1Q9Y6A1 747 aa11.5□□□□□ -0.57
ACTN1-202ENST00000376839 U3KQA8 63 aa11.5□□□□□ -0.57
ACTN1-202ENST00000376839 EIF3GO75821 320 aaKnown RBP eCLIP11.5□□□□□ -0.57
ACTN1-202ENST00000376839 SNCAP37840 140 aa11.5□□□□□ -0.57
ACTN1-202ENST00000376839 SNRPEP62304 92 aaKnown RBP11.5□□□□□ -0.57
ACTN1-202ENST00000376839 PDCD1Q15116 288 aa11.5□□□□□ -0.57
ACTN1-202ENST00000376839 OR52M1Q8NGK5 317 aa11.5□□□□□ -0.57
ACTN1-202ENST00000376839 OR5L1Q8NGL2 311 aa11.5□□□□□ -0.57
ACTN1-202ENST00000376839 HIST1H2BAQ96A08 127 aa11.5□□□□□ -0.57
ACTN1-202ENST00000376839 NAA11Q9BSU3 229 aaPredicted RBP11.5□□□□□ -0.57
ACTN1-202ENST00000376839 SH3BGRL3Q9H299 93 aa11.5□□□□□ -0.57
ACTN1-202ENST00000376839 ARV1Q9H2C2 271 aa11.5□□□□□ -0.57
ACTN1-202ENST00000376839 PLEKHA2Q9HB19 425 aa11.5□□□□□ -0.57
ACTN1-202ENST00000376839 PROK2Q9HC23 129 aa11.5□□□□□ -0.57
ACTN1-202ENST00000376839 NECAP2Q9NVZ3 263 aa11.5□□□□□ -0.57
ACTN1-202ENST00000376839 OCIAD1Q9NX40 245 aa11.5□□□□□ -0.57
ACTN1-202ENST00000376839 EDARQ9UNE0 448 aa11.5□□□□□ -0.57
ACTN1-202ENST00000376839 FREM2Q5SZK8 3169 aa11.49□□□□□ -0.57
ACTN1-202ENST00000376839 CCDC187A0A096LP49 1063 aa11.49□□□□□ -0.57
ACTN1-202ENST00000376839 E5RGE8 158 aa11.49□□□□□ -0.57
ACTN1-202ENST00000376839 TNFSF11O14788 317 aa11.49□□□□□ -0.57
ACTN1-202ENST00000376839 GEMIN2O14893 280 aaKnown RBP11.49□□□□□ -0.57
ACTN1-202ENST00000376839 ZIC3O60481 467 aa11.49□□□□□ -0.57
ACTN1-202ENST00000376839 PATE4P0C8F1 98 aa11.49□□□□□ -0.57
ACTN1-202ENST00000376839 CRYGSP22914 178 aa11.49□□□□□ -0.57
ACTN1-202ENST00000376839 FKBP2P26885 142 aaKnown RBP11.49□□□□□ -0.57
ACTN1-202ENST00000376839 CHATP28329 748 aa11.49□□□□□ -0.57
ACTN1-202ENST00000376839 ABCA11PQ4W5N1 156 aa11.49□□□□□ -0.57
ACTN1-202ENST00000376839 ZNF774Q6NX45 483 aa11.49□□□□□ -0.57
ACTN1-202ENST00000376839 MRPL14Q6P1L8 145 aaKnown RBP11.49□□□□□ -0.57
ACTN1-202ENST00000376839 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.49□□□□□ -0.57
ACTN1-202ENST00000376839 PPP1R3BQ86XI6 285 aa11.49□□□□□ -0.57
ACTN1-202ENST00000376839 OR11L1Q8NGX0 322 aa11.49□□□□□ -0.57
ACTN1-202ENST00000376839 C10orf35Q96D05 121 aa11.49□□□□□ -0.57
ACTN1-202ENST00000376839 IP6K3Q96PC2 410 aa11.49□□□□□ -0.57
ACTN1-202ENST00000376839 SRXN1Q9BYN0 137 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms