RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 UBE2KP61086 200 aa12.64□□□□□ -0.39
TNFRSF1B-201ENST00000376259 DMWDQ09019 674 aa12.64□□□□□ -0.39
TNFRSF1B-201ENST00000376259 CEACAM16Q2WEN9 425 aa12.64□□□□□ -0.39
TNFRSF1B-201ENST00000376259 WIPI1Q5MNZ9 446 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF1B-201ENST00000376259 LCN15Q6UWW0 184 aa12.64□□□□□ -0.39
TNFRSF1B-201ENST00000376259 LINC00696Q6ZRV3 163 aa12.64□□□□□ -0.39
TNFRSF1B-201ENST00000376259 ZNF611Q8N823 705 aa12.64□□□□□ -0.39
TNFRSF1B-201ENST00000376259 TCEAL3Q969E4 200 aa12.64□□□□□ -0.39
TNFRSF1B-201ENST00000376259 PBDC1Q9BVG4 233 aa12.64□□□□□ -0.39
TNFRSF1B-201ENST00000376259 MMP26Q9NRE1 261 aa12.64□□□□□ -0.39
TNFRSF1B-201ENST00000376259 ZNF581Q9P0T4 197 aa12.64□□□□□ -0.39
TNFRSF1B-201ENST00000376259 NRASP01111 189 aa12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 CLPSP04118 112 aa12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 CCL4P13236 92 aa12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 S100GP29377 79 aa12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 CFHR1Q03591 330 aa12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 SHBQ15464 509 aa12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 GUK1Q16774 197 aa12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 C1orf100Q5SVJ3 147 aa12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 DEGS2Q6QHC5 323 aa12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 MRPL21Q7Z2W9 205 aaKnown RBP12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 OR10S1Q8NGN2 331 aa12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 EDAQ92838 391 aa12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 NRIP2Q9BQI9 281 aa12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 GPR132Q9UNW8 380 aa12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 PRR14LQ5THK1 2151 aa12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 MUC3AQ02505 3323 aa12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 SERPINE2P07093 398 aa12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 ZNF32P17041 273 aa12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 ECH1Q13011 328 aa12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 UBE2V2Q15819 145 aa12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 SPATA46Q5T0L3 261 aa12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 HOGA1Q86XE5 327 aa12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 ZNF501Q96CX3 271 aaPredicted RBP12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 PLPPR2Q96GM1 343 aa12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 MED9Q9NWA0 146 aa12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 PKDREJQ9NTG1 2253 aa12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 ZNF106Q9H2Y7 1883 aaKnown RBP12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 IGKV1D-8A0A087WSZ0 117 aa12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 FAM166BA8MTA8 275 aa12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 JTBO76095 146 aa12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 NXPH1P58417 271 aa12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 AWAT1Q58HT5 328 aa12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 IP6K3Q96PC2 410 aa12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 RAB18Q9NP72 206 aa12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 NECAP2Q9NVZ3 263 aa12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 RFNGQ9Y644 331 aa12.63□□□□□ -0.39
TNFRSF1B-201ENST00000376259 A0A0A6YYD4 124 aa12.62□□□□□ -0.39
TNFRSF1B-201ENST00000376259 ARPC4-TTLL3A0A0A6YYG9 625 aa12.62□□□□□ -0.39
TNFRSF1B-201ENST00000376259 PTGER4P35408 488 aa12.62□□□□□ -0.39
TNFRSF1B-201ENST00000376259 LTBRP36941 435 aa12.62□□□□□ -0.39
TNFRSF1B-201ENST00000376259 TAGLN2P37802 199 aaKnown RBP12.62□□□□□ -0.39
TNFRSF1B-201ENST00000376259 SHEQ5VZ18 495 aa12.62□□□□□ -0.39
TNFRSF1B-201ENST00000376259 OPN5Q6U736 354 aa12.62□□□□□ -0.39
TNFRSF1B-201ENST00000376259 APC2O95996 2303 aa12.62□□□□□ -0.39
TNFRSF1B-201ENST00000376259 ZNF724A8MTY0 619 aa12.62□□□□□ -0.39
TNFRSF1B-201ENST00000376259 EFNA2O43921 213 aa12.62□□□□□ -0.39
TNFRSF1B-201ENST00000376259 TK1P04183 234 aa12.62□□□□□ -0.39
TNFRSF1B-201ENST00000376259 SSR4P51571 173 aa12.62□□□□□ -0.39
TNFRSF1B-201ENST00000376259 RAB2AP61019 212 aa12.62□□□□□ -0.39
TNFRSF1B-201ENST00000376259 SNAI3Q3KNW1 292 aa12.62□□□□□ -0.39
TNFRSF1B-201ENST00000376259 LYSMD4Q5XG99 296 aa12.62□□□□□ -0.39
TNFRSF1B-201ENST00000376259 RBMS3Q6XE24 437 aaKnown RBP12.62□□□□□ -0.39
TNFRSF1B-201ENST00000376259 LINC00518Q8N0U6 118 aa12.62□□□□□ -0.39
TNFRSF1B-201ENST00000376259 SLC30A7Q8NEW0 376 aa12.62□□□□□ -0.39
TNFRSF1B-201ENST00000376259 ERGIC1Q969X5 290 aa12.62□□□□□ -0.39
TNFRSF1B-201ENST00000376259 RNF126Q9BV68 326 aa12.62□□□□□ -0.39
TNFRSF1B-201ENST00000376259 C12orf49Q9H741 205 aa12.62□□□□□ -0.39
TNFRSF1B-201ENST00000376259 OR14J1Q9UGF5 321 aa12.62□□□□□ -0.39
TNFRSF1B-201ENST00000376259 NCOA6Q14686 2063 aaPredicted RBP12.62□□□□□ -0.39
TNFRSF1B-201ENST00000376259 MDKP21741 143 aaPredicted RBP12.61□□□□□ -0.39
TNFRSF1B-201ENST00000376259 KIAA0141Q14154 515 aaPredicted RBP12.61□□□□□ -0.39
TNFRSF1B-201ENST00000376259 IZUMO4Q1ZYL8 232 aa12.61□□□□□ -0.39
TNFRSF1B-201ENST00000376259 AK3Q9UIJ7 227 aa12.61□□□□□ -0.39
TNFRSF1B-201ENST00000376259 MCTS1Q9ULC4 181 aaKnown RBP12.61□□□□□ -0.39
TNFRSF1B-201ENST00000376259 SOX15O60248 233 aa12.61□□□□□ -0.39
TNFRSF1B-201ENST00000376259 APOC1P02654 83 aa12.61□□□□□ -0.39
TNFRSF1B-201ENST00000376259 CD74P04233 296 aa12.61□□□□□ -0.39
TNFRSF1B-201ENST00000376259 IAPPP10997 89 aa12.61□□□□□ -0.39
TNFRSF1B-201ENST00000376259 SLC25A4P12235 298 aa12.61□□□□□ -0.39
TNFRSF1B-201ENST00000376259 NKX2-1P43699 371 aaPredicted RBP12.61□□□□□ -0.39
TNFRSF1B-201ENST00000376259 HAAOP46952 286 aa12.61□□□□□ -0.39
TNFRSF1B-201ENST00000376259 ELLP55199 621 aaPredicted RBP12.61□□□□□ -0.39
TNFRSF1B-201ENST00000376259 TESK1Q15569 626 aa12.61□□□□□ -0.39
TNFRSF1B-201ENST00000376259 SCGB1C1Q8TD33 95 aa12.61□□□□□ -0.39
TNFRSF1B-201ENST00000376259 CPNE4Q96A23 557 aaPredicted RBP12.61□□□□□ -0.39
TNFRSF1B-201ENST00000376259 SH3BGRL3Q9H299 93 aa12.61□□□□□ -0.39
TNFRSF1B-201ENST00000376259 NELFAQ9H3P2 528 aa12.61□□□□□ -0.39
TNFRSF1B-201ENST00000376259 A0A1W2PQD3 144 aa12.61□□□□□ -0.39
TNFRSF1B-201ENST00000376259 DHRS3O75911 302 aa12.61□□□□□ -0.39
TNFRSF1B-201ENST00000376259 FSTP19883 344 aa12.61□□□□□ -0.39
TNFRSF1B-201ENST00000376259 ZXDAP98168 799 aa12.61□□□□□ -0.39
TNFRSF1B-201ENST00000376259 CNN3Q15417 329 aaKnown RBP12.61□□□□□ -0.39
TNFRSF1B-201ENST00000376259 USF2Q15853 346 aaPredicted RBP12.61□□□□□ -0.39
TNFRSF1B-201ENST00000376259 PLPPR5Q32ZL2 321 aa12.61□□□□□ -0.39
TNFRSF1B-201ENST00000376259 MYPOPQ86VE0 399 aaPredicted RBP12.61□□□□□ -0.39
TNFRSF1B-201ENST00000376259 D2HGDHQ8N465 521 aa12.61□□□□□ -0.39
TNFRSF1B-201ENST00000376259 SMRP1Q8NCR6 262 aa12.61□□□□□ -0.39
TNFRSF1B-201ENST00000376259 HAS2Q92819 552 aa12.61□□□□□ -0.39
TNFRSF1B-201ENST00000376259 PHYHIPLQ96FC7 376 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 1722.4 ms