RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 PTHLHP12272 177 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 KLK2P20151 261 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 SERPINA2P20848 420 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 PSMB6P28072 239 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 CHATP28329 748 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 S100GP29377 79 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 MDH2P40926 338 aaKnown RBP7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 NBL1P41271 181 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 GLP1RP43220 463 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 FGF12P61328 243 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 ZNF92Q03936 586 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 IL24Q13007 206 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 P2RY6Q15077 328 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 GABRA6Q16445 453 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 MICBQ29980 383 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 TBC1D28Q2M2D7 210 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 SHEQ5VZ18 495 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 OTPQ5XKR4 325 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 PLCXD3Q63HM9 321 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 FBXW12Q6X9E4 464 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 Q6ZT83 130 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 KCTD9Q7L273 389 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 FAM214BQ7L5A3 538 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 TMED4Q7Z7H5 227 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 CD163Q86VB7 1156 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 KCNRGQ8N5I3 272 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 LRTM2Q8N967 370 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 CCDC71LQ8N9Z2 235 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 OR11H4Q8NGC9 324 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 OR1K1Q8NGR3 316 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 OR51F2Q8NH61 342 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 LILRB1Q8NHL6 650 aaPredicted RBP7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 FNDC9Q8TBE3 224 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 NUDCD2Q8WVJ2 157 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 BCL2L2Q92843 193 aaPredicted RBP7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 DVL3Q92997 716 aaPredicted RBP7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 ZNF845Q96IR2 970 aaPredicted RBP7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 CMSS1Q9BQ75 279 aaKnown RBP7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 MFFQ9GZY8 342 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 SLC25A32Q9H2D1 315 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 SLC6A15Q9H2J7 730 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 HEXA-AS1Q9H8Q6 139 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 ELL3Q9HB65 397 aaPredicted RBP7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 PLSCR3Q9NRY6 295 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 OSGIN2Q9Y236 505 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 POLDIP2Q9Y2S7 368 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 SDK2Q58EX2 2172 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 ALPK2Q86TB3 2170 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 KMT2EQ8IZD2 1858 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 CACNA1CQ13936 2221 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 A0A0A6YYD4 124 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 KANTRA0A1W2PQU2 76 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 WIPF3A6NGB9 483 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 ARGFXA6NJG6 315 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 TMEM210A6NLX4 147 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 G3V3Q6 166 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 HTR3BO95264 441 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 IFNA2P01563 188 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 RLN2P04090 185 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 DBHP09172 617 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 WNT2P09544 360 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 LYL1P12980 280 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 RAC2P15153 192 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 ACKR3P25106 362 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 HOXC12P31275 282 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 NTF4P34130 210 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 RBM11P57052 281 aaKnown RBP7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 H2BFSP57053 126 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 UBE2NP61088 152 aaKnown RBP7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 GNG3P63215 75 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 BAMBIQ13145 260 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 Q5BKY6 102 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 FAAP20Q6NZ36 180 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 CRIP3Q6Q6R5 217 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 FIP1L1Q6UN15 594 aaKnown RBP7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 TFAP2EQ6VUC0 442 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 MOB3CQ70IA8 216 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 TMUB2Q71RG4 321 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 MOB1BQ7L9L4 216 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 P4HA3Q7Z4N8 544 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 LSRQ86X29 649 aaPredicted RBP7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 SLC38A6Q8IZM9 456 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 ZADH2Q8N4Q0 377 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 EIF4E3Q8N5X7 224 aaKnown RBP7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 OR4S1Q8NGB4 309 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 AKR7LQ8NHP1 331 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 ZNF837Q96EG3 531 aaPredicted RBP7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 ELMOD3Q96FG2 381 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 ABHD14BQ96IU4 210 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 MICU1Q9BPX6 476 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 NICN1Q9BSH3 213 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 ZMAT3Q9HA38 289 aaKnown RBP7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 SEBOXQ9HB31 216 aaPredicted RBP7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 TNFSF18Q9UNG2 199 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 ST3GAL6Q9Y274 331 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 VSIG4Q9Y279 399 aa7.54□□□□□ -1.2
SNRNP40-202ENST00000373720 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 FAM230AA0A1W2PPH8 454 aa7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 C5orf49A4QMS7 147 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms