RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 NEURL1O76050 574 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 ATP1B1P05026 303 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 CD37P11049 281 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 GCSHP23434 173 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 TEAD1P28347 426 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 NPSR1Q6W5P4 371 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 LILRA2Q8N149 483 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 LRRC18Q8N456 261 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 WDR31Q8NA23 367 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 OR5D13Q8NGL4 314 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 TMEM239Q8WW34 195 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 OR5M11Q96RB7 305 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 TBX15Q96SF7 602 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 LRRC61Q9BV99 259 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 SERINC4A6NH21 518 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 CLDN14O95500 239 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 SRSF6Q13247 344 aaKnown RBP7.75□□□□□ -1.17
SYNE1-206ENST00000367253 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.75□□□□□ -1.17
SYNE1-206ENST00000367253 TMEM95Q3KNT9 176 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 ZNF770Q6IQ21 691 aaPredicted RBP7.75□□□□□ -1.17
SYNE1-206ENST00000367253 ZNF534Q76KX8 674 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 OVCH1Q7RTY7 1134 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 SDR9C7Q8NEX9 313 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 OR13C8Q8NGS7 320 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 OR52E5Q8NH55 327 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 TREX1Q9NSU2 369 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 MOKQ9UQ07 419 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 RNF115Q9Y4L5 304 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 CDK5RAP2Q96SN8 1893 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 LAMP1P11279 417 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 DPTQ07507 201 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 OLIG2Q13516 323 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 DHRS4L2Q6PKH6 230 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 ROBO4Q8WZ75 1007 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 TSLPQ969D9 159 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 SMIM7Q9BQ49 75 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 ETV7Q9Y603 341 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 HMX2A2RU54 273 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 CLEC18AA5D8T8 446 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 ST8SIA3O43173 380 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 SOD3P08294 240 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 GAMTQ14353 236 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 PGGHGQ32M88 737 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 FAM27D1Q5T7N8 215 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 CLEC18BQ6UXF7 455 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 H1FNTQ75WM6 255 aaPredicted RBP7.74□□□□□ -1.17
SYNE1-206ENST00000367253 CLEC18CQ8NCF0 446 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 OR10A7Q8NGE5 316 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 SLC35A4Q96G79 324 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 GPR78Q96P69 363 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 PLEKHA2Q9HB19 425 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 NRIP3Q9NQ35 241 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 IGHV1OR21-1A0A087WYE8 117 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 ZNF195O14628 629 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 MAGEA5P43359 124 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 AMTP48728 403 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 DHODHQ02127 395 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 DHRS7BQ6IAN0 325 aaPredicted RBP7.74□□□□□ -1.17
SYNE1-206ENST00000367253 TMEM123Q8N131 208 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 ZNF740Q8NDX6 193 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 OR8D4Q8NGM9 314 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 FUBP1Q96AE4 644 aaKnown RBP7.74□□□□□ -1.17
SYNE1-206ENST00000367253 C8orf44Q96CB5 159 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 SNX22Q96L94 193 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 GSX1Q9H4S2 264 aaPredicted RBP7.74□□□□□ -1.17
SYNE1-206ENST00000367253 SAP30LQ9HAJ7 183 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 TRAPPC4Q9Y296 219 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 MN1Q10571 1320 aaPredicted RBP7.74□□□□□ -1.17
SYNE1-206ENST00000367253 CACNA1DQ01668 2161 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 BRWD1Q9NSI6 2320 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 ITGB1BP1O14713 200 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 MPDU1O75352 247 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 SORBS2O94875 1100 aaKnown RBP7.74□□□□□ -1.17
SYNE1-206ENST00000367253 CLDN10P78369 228 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 DCAF10Q5QP82 559 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 BAP18Q8IXM2 172 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 TMEM251Q8N6I4 163 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 TP53I13Q8NBR0 393 aaPredicted RBP7.74□□□□□ -1.17
SYNE1-206ENST00000367253 LMO3Q8TAP4 145 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 PARP12Q9H0J9 701 aaKnown RBP7.74□□□□□ -1.17
SYNE1-206ENST00000367253 CHTOPQ9Y3Y2 248 aaKnown RBP7.74□□□□□ -1.17
SYNE1-206ENST00000367253 MYH10P35580 1976 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 ARFGEF1Q9Y6D6 1849 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 TSPAN13O95857 204 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 PLA2G5P39877 138 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 KCNAB1Q14722 419 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 RAB6CQ53S08 254 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 TPTE2P1Q5T6R2 138 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 COMMD6Q7Z4G1 85 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 OR5D18Q8NGL1 313 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 SYT11Q9BT88 431 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 GGACTQ9BVM4 153 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 NOX4Q9NPH5 578 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 RASL12Q9NYN1 266 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 TAS2R5Q9NYW4 299 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 OR52A1Q9UKL2 312 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 NPTNQ9Y639 398 aa7.74□□□□□ -1.17
SYNE1-206ENST00000367253 TMEM269A0A1B0GVZ9 245 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 A0A1B0GWJ7 208 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 PNLIPRP2P54317 469 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms