RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 PMP22Q01453 160 aa12.3□□□□□ -0.44
COL6A1-201ENST00000361866 MRPL49Q13405 166 aaKnown RBP12.3□□□□□ -0.44
COL6A1-201ENST00000361866 DRAM2Q6UX65 266 aa12.3□□□□□ -0.44
COL6A1-201ENST00000361866 LYZL2Q7Z4W2 148 aa12.3□□□□□ -0.44
COL6A1-201ENST00000361866 INTS12Q96CB8 462 aaKnown RBP12.3□□□□□ -0.44
COL6A1-201ENST00000361866 GHRLQ9UBU3 117 aa12.3□□□□□ -0.44
COL6A1-201ENST00000361866 TNS1Q9HBL0 1735 aaKnown RBP12.3□□□□□ -0.44
COL6A1-201ENST00000361866 SLC25A4P12235 298 aa12.3□□□□□ -0.44
COL6A1-201ENST00000361866 HAAOP46952 286 aa12.3□□□□□ -0.44
COL6A1-201ENST00000361866 FAHD2BQ6P2I3 314 aaPredicted RBP12.3□□□□□ -0.44
COL6A1-201ENST00000361866 IL22RA1Q8N6P7 574 aa12.3□□□□□ -0.44
COL6A1-201ENST00000361866 UBAC2Q8NBM4 344 aa12.3□□□□□ -0.44
COL6A1-201ENST00000361866 FAHD2AQ96GK7 314 aa12.3□□□□□ -0.44
COL6A1-201ENST00000361866 WDR13Q9H1Z4 485 aa12.3□□□□□ -0.44
COL6A1-201ENST00000361866 TRBV5-7A0A0A0MS05 114 aa12.3□□□□□ -0.44
COL6A1-201ENST00000361866 FTCDNL1E5RQL4 147 aa12.3□□□□□ -0.44
COL6A1-201ENST00000361866 EGR4Q05215 589 aa12.3□□□□□ -0.44
COL6A1-201ENST00000361866 OSR2Q8N2R0 312 aa12.3□□□□□ -0.44
COL6A1-201ENST00000361866 OR6S1Q8NH40 331 aa12.3□□□□□ -0.44
COL6A1-201ENST00000361866 CTHRC1Q96CG8 243 aa12.3□□□□□ -0.44
COL6A1-201ENST00000361866 SERTAD4Q9NUC0 356 aa12.3□□□□□ -0.44
COL6A1-201ENST00000361866 DNAJB11Q9UBS4 358 aa12.3□□□□□ -0.44
COL6A1-201ENST00000361866 LIPGQ9Y5X9 500 aa12.3□□□□□ -0.44
COL6A1-201ENST00000361866 TNFSF11O14788 317 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 CD1AP06126 327 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 CD63P08962 238 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 GSK3AP49840 483 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 SULT1A1P50225 295 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 MMP16P51512 607 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 RAB1AP62820 205 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 ZNF260Q3ZCT1 412 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 ZNF787Q6DD87 383 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 RBMS3Q6XE24 437 aaKnown RBP12.29□□□□□ -0.44
COL6A1-201ENST00000361866 PP6455Q8WZ26 134 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 OR10C1Q96KK4 312 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 LAMP3Q9UQV4 416 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 TSC2P49815 1807 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 AKAP6Q13023 2319 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 A0A1W2PR80 420 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 MSGN1A6NI15 193 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 DFFBO76075 338 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 SMIM10L1P0DMW3 83 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 TMEM41BQ5BJD5 291 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 C9orf40Q8IXQ3 194 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 CA5BP1Q8WTZ4 195 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 SMIM10Q96HG1 83 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 SMIM7Q9BQ49 75 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 CDH20Q9HBT6 801 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 PCOLCE2Q9UKZ9 415 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 LOC285556D6RIA3 1793 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 TRBV23-1A0A0A0MS06 115 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 YIF1AO95070 293 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 ACTL6AO96019 429 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 CEBPEQ15744 281 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 PDLIM3Q53GG5 364 aaPredicted RBP12.29□□□□□ -0.44
COL6A1-201ENST00000361866 ZNF705AQ6ZN79 300 aaPredicted RBP12.29□□□□□ -0.44
COL6A1-201ENST00000361866 ASB10Q8WXI3 467 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 GNPNAT1Q96EK6 184 aaPredicted RBP12.29□□□□□ -0.44
COL6A1-201ENST00000361866 NPTNQ9Y639 398 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 LMO7DNF2Z398 122 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 J3QRE1 110 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 SOX15O60248 233 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 OR2C3Q8N628 320 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 OR10J5Q8NHC4 309 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 GFI1Q99684 422 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 UBE2ZQ9H832 354 aaPredicted RBP12.29□□□□□ -0.44
COL6A1-201ENST00000361866 PLEKHA3Q9HB20 300 aa12.29□□□□□ -0.44
COL6A1-201ENST00000361866 YBX2Q9Y2T7 364 aaKnown RBP12.29□□□□□ -0.44
COL6A1-201ENST00000361866 RAB5AP20339 215 aa12.28□□□□□ -0.44
COL6A1-201ENST00000361866 ZNF808Q8N4W9 903 aaPredicted RBP12.28□□□□□ -0.44
COL6A1-201ENST00000361866 ZNF610Q8N9Z0 462 aa12.28□□□□□ -0.44
COL6A1-201ENST00000361866 RNF133Q8WVZ7 376 aa12.28□□□□□ -0.44
COL6A1-201ENST00000361866 PECRQ9BY49 303 aa12.28□□□□□ -0.44
COL6A1-201ENST00000361866 LOC101059948A0A1B0GTJ6 334 aa12.28□□□□□ -0.44
COL6A1-201ENST00000361866 AP4M1O00189 453 aa12.28□□□□□ -0.44
COL6A1-201ENST00000361866 LPAR6P43657 344 aa12.28□□□□□ -0.44
COL6A1-201ENST00000361866 FHITP49789 147 aa12.28□□□□□ -0.44
COL6A1-201ENST00000361866 NHLH2Q02577 135 aa12.28□□□□□ -0.44
COL6A1-201ENST00000361866 ZNF774Q6NX45 483 aa12.28□□□□□ -0.44
COL6A1-201ENST00000361866 ETV3LQ6ZN32 361 aa12.28□□□□□ -0.44
COL6A1-201ENST00000361866 C15orf54Q8N8G6 183 aa12.28□□□□□ -0.44
COL6A1-201ENST00000361866 TMEM37Q8WXS4 190 aa12.28□□□□□ -0.44
COL6A1-201ENST00000361866 ZNF251Q9BRH9 671 aa12.28□□□□□ -0.44
COL6A1-201ENST00000361866 TMPRSS5Q9H3S3 457 aa12.28□□□□□ -0.44
COL6A1-201ENST00000361866 OBP2BQ9NPH6 170 aa12.28□□□□□ -0.44
COL6A1-201ENST00000361866 VWA8A3KMH1 1905 aa12.28□□□□□ -0.44
COL6A1-201ENST00000361866 OR6C6A6NF89 314 aa12.28□□□□□ -0.44
COL6A1-201ENST00000361866 ADAM20O43506 726 aa12.28□□□□□ -0.44
COL6A1-201ENST00000361866 DHRS3O75911 302 aa12.28□□□□□ -0.44
COL6A1-201ENST00000361866 HNF1AP20823 631 aa12.28□□□□□ -0.44
COL6A1-201ENST00000361866 RSPO4Q2I0M5 234 aaPredicted RBP12.28□□□□□ -0.44
COL6A1-201ENST00000361866 CEACAM16Q2WEN9 425 aa12.28□□□□□ -0.44
COL6A1-201ENST00000361866 ANXA10Q9UJ72 324 aa12.28□□□□□ -0.44
COL6A1-201ENST00000361866 MCTS1Q9ULC4 181 aaKnown RBP12.28□□□□□ -0.44
COL6A1-201ENST00000361866 RNF150Q9ULK6 438 aa12.28□□□□□ -0.44
COL6A1-201ENST00000361866 TP53TG5Q9Y2B4 290 aa12.28□□□□□ -0.44
COL6A1-201ENST00000361866 MPTX1A8MV57 137 aa12.27□□□□□ -0.44
COL6A1-201ENST00000361866 DNASE2O00115 360 aaPredicted RBP12.27□□□□□ -0.44
COL6A1-201ENST00000361866 MDKP21741 143 aaPredicted RBP12.27□□□□□ -0.44
COL6A1-201ENST00000361866 FGF8P55075 233 aaPredicted RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms