RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 MEGF10Q96KG7 1140 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 RHBDD3Q9Y3P4 386 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 GPR45Q9Y5Y3 372 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 TICRRQ7Z2Z1 1910 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 RAI1Q7Z5J4 1906 aaPredicted RBP2.96□□□□□ -1.94
CSMD3-202ENST00000339701 OR52A4PA6NMU1 304 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 CEBPZOSA8MTT3 80 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 GPR31O00270 319 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 TCRBP04435 133 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 ELK4P28324 431 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 HOXA11P31270 313 aaPredicted RBP2.95□□□□□ -1.94
CSMD3-202ENST00000339701 ACVRL1P37023 503 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 KCNAB1Q14722 419 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 SOWAHAQ2M3V2 549 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 PLPPR5Q32ZL2 321 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 ZNF626Q68DY1 528 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 SFTA2Q6UW10 78 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 PQLC2Q6ZP29 291 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 HSD11B1LQ7Z5J1 315 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 CA13Q8N1Q1 262 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 LINC01465Q8N7H1 131 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 OR5M9Q8NGP3 310 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 LHFPL5Q8TAF8 219 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 POM121L2Q96KW2 1035 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 PKMYT1Q99640 499 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 MAP1LC3CQ9BXW4 147 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 OR2J1Q9GZK6 312 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 ASB1Q9Y576 335 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 SORL1Q92673 2214 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 KIAA2026Q5HYC2 2103 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.95□□□□□ -1.94
CSMD3-202ENST00000339701 ODAMA1E959 279 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 C1QTNF9BB2RNN3 333 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 UPK2O00526 184 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 CA6P23280 308 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 MTPNP58546 118 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 PKIAP61925 76 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 RIGQ13278 110 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 OR1C1Q15619 314 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 RANBP10Q6VN20 620 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 GTSCR1Q86UQ5 136 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 DCBLD1Q8N8Z6 715 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 C17orf47Q8NEP4 570 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 OR2M7Q8NG81 312 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 DTD2Q96FN9 168 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 OR6C3Q9NZP0 311 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 NAGKQ9UJ70 344 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 LIPGQ9Y5X9 500 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 IGSF23A1L1A6 192 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 H7C1H1 209 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 RNF225M0QZC1 329 aaPredicted RBP2.95□□□□□ -1.94
CSMD3-202ENST00000339701 M0R1X1 148 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 SIRPB1O00241 398 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 CLDN7O95471 211 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 HBZP02008 142 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 SEMG1P04279 462 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 AKR1C1Q04828 323 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 LTBQ06643 244 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 HERPUD1Q15011 391 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 ACER2Q5QJU3 275 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 Q6ZN92 141 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 UBE2DNLQ8IWF7 75 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 OR4D10Q8NGI6 311 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 OR10X1Q8NGY0 326 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 MRPL30Q8TCC3 161 aaKnown RBP2.95□□□□□ -1.94
CSMD3-202ENST00000339701 TFAP2BQ92481 460 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 GPR137Q96N19 417 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 CHIAQ9BZP6 476 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 NIT2Q9NQR4 276 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 WSB2Q9NYS7 404 aaPredicted RBP2.95□□□□□ -1.94
CSMD3-202ENST00000339701 THAP10Q9P2Z0 257 aaPredicted RBP2.95□□□□□ -1.94
CSMD3-202ENST00000339701 TGIF2-C20orf24A0A0A6YYL0 155 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 A0A1B0GTH9 108 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 CD8B2A6NJW9 211 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 K7ESM1 405 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 S1PR2O95136 353 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 CD160O95971 181 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 CTSSP25774 331 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 LMO2P25791 158 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 PMELP40967 661 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 SEC11AP67812 179 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 PDZK1IP1Q13113 114 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 ETFDHQ16134 617 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 NKG7Q16617 165 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 POU2AF1Q16633 256 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 DEFB134Q4QY38 66 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 MARCH8Q5T0T0 291 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 NCR3LG1Q68D85 454 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 H2BFWTQ7Z2G1 175 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 GOLGA7Q7Z5G4 137 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 GLCCI1Q86VQ1 547 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 DDA1Q9BW61 102 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 Q9N2K0 584 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 HEYLQ9NQ87 328 aaPredicted RBP2.95□□□□□ -1.94
CSMD3-202ENST00000339701 ELF5Q9UKW6 265 aaPredicted RBP2.95□□□□□ -1.94
CSMD3-202ENST00000339701 TRAV34A0A0B4J273 112 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 OTOL1A6NHN0 477 aaPredicted RBP2.95□□□□□ -1.94
CSMD3-202ENST00000339701 H3BSA7 217 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 M0QZQ0 153 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 SHC1P29353 583 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms