RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 SH2D2AQ9NP31 389 aa14.73□□□□□ -0.05
PTCH1-201ENST00000331920 RAXQ9Y2V3 346 aa14.73□□□□□ -0.05
PTCH1-201ENST00000331920 MFSD2BA6NFX1 497 aa14.73□□□□□ -0.05
PTCH1-201ENST00000331920 SHISA8B8ZZ34 492 aa14.73□□□□□ -0.05
PTCH1-201ENST00000331920 TAPBPO15533 448 aa14.73□□□□□ -0.05
PTCH1-201ENST00000331920 EIF4E2O60573 245 aaKnown RBP14.73□□□□□ -0.05
PTCH1-201ENST00000331920 ZNF205O95201 554 aa14.73□□□□□ -0.05
PTCH1-201ENST00000331920 IGHA1P01876 353 aa14.73□□□□□ -0.05
PTCH1-201ENST00000331920 IGHA2P01877 340 aa14.73□□□□□ -0.05
PTCH1-201ENST00000331920 AVPR2P30518 371 aa14.73□□□□□ -0.05
PTCH1-201ENST00000331920 UBE2L3P68036 154 aaKnown RBP14.73□□□□□ -0.05
PTCH1-201ENST00000331920 SLCO4C1Q6ZQN7 724 aa14.73□□□□□ -0.05
PTCH1-201ENST00000331920 LPAR2Q9HBW0 351 aa14.73□□□□□ -0.05
PTCH1-201ENST00000331920 TFPI2P48307 235 aa14.73□□□□□ -0.05
PTCH1-201ENST00000331920 RELBQ01201 579 aa14.73□□□□□ -0.05
PTCH1-201ENST00000331920 DPPA3Q6W0C5 159 aa14.73□□□□□ -0.05
PTCH1-201ENST00000331920 TMUB1Q9BVT8 246 aa14.73□□□□□ -0.05
PTCH1-201ENST00000331920 PIKFYVEQ9Y2I7 2098 aa14.73□□□□□ -0.05
PTCH1-201ENST00000331920 PLPP1O14494 284 aa14.73□□□□□ -0.05
PTCH1-201ENST00000331920 ERRFI1Q9UJM3 462 aaPredicted RBP14.73□□□□□ -0.05
PTCH1-201ENST00000331920 HEATR5BQ9P2D3 2071 aa14.72□□□□□ -0.05
PTCH1-201ENST00000331920 PHLPP1O60346 1717 aa14.72□□□□□ -0.05
PTCH1-201ENST00000331920 M0R296 226 aa14.72□□□□□ -0.05
PTCH1-201ENST00000331920 LPAR6P43657 344 aa14.72□□□□□ -0.05
PTCH1-201ENST00000331920 PAFAH1B2P68402 229 aa14.72□□□□□ -0.05
PTCH1-201ENST00000331920 BTG2P78543 158 aa14.72□□□□□ -0.05
PTCH1-201ENST00000331920 SELENBP1Q13228 472 aa14.72□□□□□ -0.05
PTCH1-201ENST00000331920 TFAP2AP05549 437 aa14.72□□□□□ -0.05
PTCH1-201ENST00000331920 ANXA10Q9UJ72 324 aa14.72□□□□□ -0.05
PTCH1-201ENST00000331920 IGHV3-21A0A0B4J1V1 117 aa14.72□□□□□ -0.05
PTCH1-201ENST00000331920 GNG7O60262 68 aa14.72□□□□□ -0.05
PTCH1-201ENST00000331920 CCL2P13500 99 aa14.72□□□□□ -0.05
PTCH1-201ENST00000331920 CSNK1G1Q9HCP0 422 aa14.72□□□□□ -0.05
PTCH1-201ENST00000331920 WNT1P04628 370 aa14.72□□□□□ -0.05
PTCH1-201ENST00000331920 MYF5P13349 255 aa14.72□□□□□ -0.05
PTCH1-201ENST00000331920 HLA-DRB5Q30154 266 aa14.72□□□□□ -0.05
PTCH1-201ENST00000331920 MRPL54Q6P161 138 aaKnown RBP14.72□□□□□ -0.05
PTCH1-201ENST00000331920 OIT3Q8WWZ8 545 aa14.72□□□□□ -0.05
PTCH1-201ENST00000331920 NEIL1Q96FI4 390 aaPredicted RBP14.72□□□□□ -0.05
PTCH1-201ENST00000331920 GPA33Q99795 319 aa14.72□□□□□ -0.05
PTCH1-201ENST00000331920 BEX4Q9NWD9 120 aaPredicted RBP14.72□□□□□ -0.05
PTCH1-201ENST00000331920 NGFP01138 241 aa14.72□□□□□ -0.05
PTCH1-201ENST00000331920 HOXC13P31276 330 aa14.72□□□□□ -0.05
PTCH1-201ENST00000331920 OTUD1Q5VV17 481 aaPredicted RBP14.72□□□□□ -0.05
PTCH1-201ENST00000331920 FBXO46Q6PJ61 603 aaPredicted RBP14.72□□□□□ -0.05
PTCH1-201ENST00000331920 PRNTQ86SH4 94 aa14.72□□□□□ -0.05
PTCH1-201ENST00000331920 GABARAPL3Q9BY60 117 aa14.72□□□□□ -0.05
PTCH1-201ENST00000331920 ASCL3Q9NQ33 180 aa14.72□□□□□ -0.05
PTCH1-201ENST00000331920 SVILO95425 2214 aa14.72□□□□□ -0.05
PTCH1-201ENST00000331920 MBTPS2O43462 519 aa14.72□□□□□ -0.05
PTCH1-201ENST00000331920 NAT8Q9UHE5 227 aa14.72□□□□□ -0.05
PTCH1-201ENST00000331920 LOXL2Q9Y4K0 774 aa14.72□□□□□ -0.05
PTCH1-201ENST00000331920 TUBAL3A6NHL2 446 aa14.71□□□□□ -0.05
PTCH1-201ENST00000331920 CDRT15L2A8MXV6 281 aa14.71□□□□□ -0.05
PTCH1-201ENST00000331920 CTSLP07711 333 aa14.71□□□□□ -0.05
PTCH1-201ENST00000331920 RIGQ13278 110 aa14.71□□□□□ -0.05
PTCH1-201ENST00000331920 ZNF441Q8N8Z8 693 aa14.71□□□□□ -0.05
PTCH1-201ENST00000331920 BVESQ8NE79 360 aa14.71□□□□□ -0.05
PTCH1-201ENST00000331920 ZNF680Q8NEM1 530 aa14.71□□□□□ -0.05
PTCH1-201ENST00000331920 OR11G2Q8NGC1 345 aa14.71□□□□□ -0.05
PTCH1-201ENST00000331920 DYNLT3P51808 116 aa14.71□□□□□ -0.05
PTCH1-201ENST00000331920 NCMAPQ5T1S8 102 aa14.71□□□□□ -0.05
PTCH1-201ENST00000331920 SLC16A13Q7RTY0 426 aa14.71□□□□□ -0.05
PTCH1-201ENST00000331920 ARIH2OSQ8N7S6 290 aa14.71□□□□□ -0.05
PTCH1-201ENST00000331920 OR10G4Q8NGN3 311 aa14.71□□□□□ -0.05
PTCH1-201ENST00000331920 OR10G9Q8NGN4 311 aa14.71□□□□□ -0.05
PTCH1-201ENST00000331920 OR10G7Q8NGN6 311 aa14.71□□□□□ -0.05
PTCH1-201ENST00000331920 PIK3IP1Q96FE7 263 aa14.71□□□□□ -0.05
PTCH1-201ENST00000331920 JAM3Q9BX67 310 aa14.71□□□□□ -0.05
PTCH1-201ENST00000331920 FUCA1P04066 466 aa14.71□□□□□ -0.05
PTCH1-201ENST00000331920 GSG1Q2KHT4 349 aa14.71□□□□□ -0.05
PTCH1-201ENST00000331920 ZC3H3Q8IXZ2 948 aaKnown RBP14.71□□□□□ -0.05
PTCH1-201ENST00000331920 SNX22Q96L94 193 aa14.71□□□□□ -0.05
PTCH1-201ENST00000331920 OCIAD1Q9NX40 245 aa14.71□□□□□ -0.05
PTCH1-201ENST00000331920 FAM53CQ9NYF3 392 aa14.71□□□□□ -0.05
PTCH1-201ENST00000331920 A0A1B0GUH1 482 aa14.71□□□□□ -0.05
PTCH1-201ENST00000331920 PFN3P60673 137 aa14.71□□□□□ -0.05
PTCH1-201ENST00000331920 C11orf87Q6NUJ2 197 aa14.71□□□□□ -0.05
PTCH1-201ENST00000331920 MBD3L1Q8WWY6 194 aa14.71□□□□□ -0.05
PTCH1-201ENST00000331920 WSB1Q9Y6I7 421 aa14.71□□□□□ -0.05
PTCH1-201ENST00000331920 PYCARD-AS1I3L0S3 204 aa14.71□□□□□ -0.05
PTCH1-201ENST00000331920 FABP5Q01469 135 aa14.71□□□□□ -0.05
PTCH1-201ENST00000331920 NAAAQ02083 359 aa14.71□□□□□ -0.05
PTCH1-201ENST00000331920 ABHD17CQ6PCB6 329 aa14.71□□□□□ -0.05
PTCH1-201ENST00000331920 ADAMTSL4Q6UY14 1074 aa14.71□□□□□ -0.05
PTCH1-201ENST00000331920 CST4P01036 141 aa14.71□□□□□ -0.06
PTCH1-201ENST00000331920 ZNF865P0CJ78 1059 aaPredicted RBP14.71□□□□□ -0.06
PTCH1-201ENST00000331920 MYOGP15173 224 aa14.71□□□□□ -0.06
PTCH1-201ENST00000331920 GFRA1P56159 465 aa14.71□□□□□ -0.06
PTCH1-201ENST00000331920 ROM1Q03395 351 aa14.71□□□□□ -0.06
PTCH1-201ENST00000331920 TEX37Q96LM6 180 aa14.71□□□□□ -0.06
PTCH1-201ENST00000331920 LYRM4Q9HD34 91 aa14.71□□□□□ -0.06
PTCH1-201ENST00000331920 PLA2G3Q9NZ20 509 aa14.71□□□□□ -0.06
PTCH1-201ENST00000331920 MAP1LC3B2A6NCE7 125 aa14.7□□□□□ -0.06
PTCH1-201ENST00000331920 ZNF253O75346 499 aa14.7□□□□□ -0.06
PTCH1-201ENST00000331920 GGTA1PQ4G0N0 100 aa14.7□□□□□ -0.06
PTCH1-201ENST00000331920 NUDT8Q8WV74 236 aa14.7□□□□□ -0.06
PTCH1-201ENST00000331920 SDF2Q99470 211 aa14.7□□□□□ -0.06
PTCH1-201ENST00000331920 MAP1LC3BQ9GZQ8 125 aa14.7□□□□□ -0.06
PTCH1-201ENST00000331920 PET117Q6UWS5 81 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms