RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 CMBLQ96DG6 245 aa16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 PLCE1Q9P212 2302 aa16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 SPEF1Q9Y4P9 236 aa16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 TRAV6A0A075B6T7 132 aa16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 A0A0A6YYD4 124 aa16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 C7orf66A4D0T2 115 aa16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 CLEC18AA5D8T8 446 aa16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 TMEM235A6NFC5 223 aa16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 H2AFB2P0C5Z0 115 aa16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 GTF2F2P13984 249 aa16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 ATP1B3P54709 279 aa16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 CLEC18BQ6UXF7 455 aa16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 ASCL4Q6XD76 172 aa16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 DMRTC2Q8IXT2 367 aaPredicted RBP16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 CLEC18CQ8NCF0 446 aa16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 OR6F1Q8NGZ6 308 aa16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 KLF14Q8TD94 323 aaPredicted RBP16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 PIGCQ92535 297 aa16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 RNF170Q96K19 258 aa16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 NICN1Q9BSH3 213 aa16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 TM2D1Q9BX74 207 aa16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 BANF2Q9H503 90 aa16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 ZMAT3Q9HA38 289 aaKnown RBP16.03■□□□□ 0.16
EXOSC3-201ENST00000327304 TENM4Q6N022 2769 aa16.02■□□□□ 0.16
EXOSC3-201ENST00000327304 FAM230AA0A1W2PPH8 454 aa16.02■□□□□ 0.16
EXOSC3-201ENST00000327304 CST4P01036 141 aa16.02■□□□□ 0.16
EXOSC3-201ENST00000327304 MGMTP16455 207 aa16.02■□□□□ 0.16
EXOSC3-201ENST00000327304 LOXP28300 417 aaPredicted RBP16.02■□□□□ 0.16
EXOSC3-201ENST00000327304 OR2T2Q6IF00 324 aa16.02■□□□□ 0.16
EXOSC3-201ENST00000327304 VHLLQ6RSH7 139 aa16.02■□□□□ 0.16
EXOSC3-201ENST00000327304 MOB3CQ70IA8 216 aa16.02■□□□□ 0.16
EXOSC3-201ENST00000327304 FTMTQ8N4E7 242 aa16.02■□□□□ 0.16
EXOSC3-201ENST00000327304 OR4C16Q8NGL9 310 aa16.02■□□□□ 0.16
EXOSC3-201ENST00000327304 HS3ST6Q96QI5 342 aa16.02■□□□□ 0.16
EXOSC3-201ENST00000327304 SELENOIQ9C0D9 397 aa16.02■□□□□ 0.16
EXOSC3-201ENST00000327304 METTL9Q9H1A3 318 aa16.02■□□□□ 0.16
EXOSC3-201ENST00000327304 C20orf85Q9H1P6 137 aa16.02■□□□□ 0.16
EXOSC3-201ENST00000327304 MCUBQ9NWR8 336 aa16.02■□□□□ 0.16
EXOSC3-201ENST00000327304 KLF2Q9Y5W3 355 aaPredicted RBP16.02■□□□□ 0.16
EXOSC3-201ENST00000327304 COL12A1Q99715 3063 aa16.02■□□□□ 0.15
EXOSC3-201ENST00000327304 IGKV1-27A0A075B6S5 117 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 A0A1W2PP11 408 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 CD300LBA8K4G0 201 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 SHISA9B4DS77 424 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 ZNF780AO75290 641 aaPredicted RBP16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 CD3EP07766 207 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 TMEM225BP0DP42 221 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 RCVRNP35243 200 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 GLRXP35754 106 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 FABP6P51161 128 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 PSG7Q13046 419 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 PNLIPRP3Q17RR3 467 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 ALKBH6Q3KRA9 238 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 PLCXD3Q63HM9 321 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 RGS7BPQ6MZT1 257 aaPredicted RBP16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 STEAP1BQ6NZ63 245 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 NUP37Q8NFH4 326 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 TMEM171Q8WVE6 324 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 RAB3CQ96E17 227 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 PIK3IP1Q96FE7 263 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 ATP23Q9Y6H3 246 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 ROS1P08922 2347 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 MEIS3P1A6NDR6 274 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 LILRA1O75019 489 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 CYB5AP00167 134 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 PLAUP00749 431 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 RAC2P15153 192 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 HIST1H1DP16402 221 aaKnown RBP16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 TUBG1P23258 451 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 CPT2P23786 658 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 RAB25P57735 213 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 ARL6IP1Q15041 203 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 ZNF718Q3SXZ3 478 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 MEX3BQ6ZN04 569 aaKnown RBP16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 C1orf174Q8IYL3 243 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 BHLHE23Q8NDY6 225 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 PXT1Q8NFP0 134 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 OR51T1Q8NGJ9 327 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 FAM222BQ8WU58 562 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 NEUROG1Q92886 237 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 TUBG2Q9NRH3 451 aa16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 ELF5Q9UKW6 265 aaPredicted RBP16.01■□□□□ 0.15
EXOSC3-201ENST00000327304 FOXI3A8MTJ6 420 aaPredicted RBP16■□□□□ 0.15
EXOSC3-201ENST00000327304 PRSS44E7EML9 344 aa16■□□□□ 0.15
EXOSC3-201ENST00000327304 SOCS1O15524 211 aa16■□□□□ 0.15
EXOSC3-201ENST00000327304 NDUFB6O95139 128 aa16■□□□□ 0.15
EXOSC3-201ENST00000327304 CD3DP04234 171 aa16■□□□□ 0.15
EXOSC3-201ENST00000327304 GNB3P16520 340 aa16■□□□□ 0.15
EXOSC3-201ENST00000327304 SERPINA2P20848 420 aa16■□□□□ 0.15
EXOSC3-201ENST00000327304 EIF2B2P49770 351 aaKnown RBP16■□□□□ 0.15
EXOSC3-201ENST00000327304 TMEM50BP56557 158 aa16■□□□□ 0.15
EXOSC3-201ENST00000327304 RRAS2P62070 204 aaPredicted RBP16■□□□□ 0.15
EXOSC3-201ENST00000327304 MBNL2Q5VZF2 373 aaKnown RBP16■□□□□ 0.15
EXOSC3-201ENST00000327304 LRP11Q86VZ4 500 aa16■□□□□ 0.15
EXOSC3-201ENST00000327304 GHITMQ9H3K2 345 aa16■□□□□ 0.15
EXOSC3-201ENST00000327304 CA10Q9NS85 328 aa16■□□□□ 0.15
EXOSC3-201ENST00000327304 IL36GQ9NZH8 169 aa16■□□□□ 0.15
EXOSC3-201ENST00000327304 ZNF221Q9UK13 617 aa16■□□□□ 0.15
EXOSC3-201ENST00000327304 RNF115Q9Y4L5 304 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms