RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 ZNF20P17024 532 aa15.04■□□□□ -0
SCAMP4-201ENST00000316097 SNCAP37840 140 aa15.04■□□□□ -0
SCAMP4-201ENST00000316097 EXT1Q16394 746 aa15.04■□□□□ -0
SCAMP4-201ENST00000316097 DEGS2Q6QHC5 323 aa15.04■□□□□ -0
SCAMP4-201ENST00000316097 CLEC9AQ6UXN8 241 aa15.04■□□□□ -0
SCAMP4-201ENST00000316097 LHFPL1Q86WI0 220 aa15.04■□□□□ -0
SCAMP4-201ENST00000316097 COMMD2Q86X83 199 aa15.04■□□□□ -0
SCAMP4-201ENST00000316097 ZNF248Q8NDW4 579 aa15.04■□□□□ -0
SCAMP4-201ENST00000316097 LYPD6BQ8NI32 183 aa15.04■□□□□ -0
SCAMP4-201ENST00000316097 SLAMF6Q96DU3 332 aa15.04■□□□□ -0
SCAMP4-201ENST00000316097 TMEM59Q9BXS4 323 aa15.04■□□□□ -0
SCAMP4-201ENST00000316097 EHFQ9NZC4 300 aa15.04■□□□□ -0
SCAMP4-201ENST00000316097 FBLN5Q9UBX5 448 aa15.04■□□□□ -0
SCAMP4-201ENST00000316097 OSGIN2Q9Y236 505 aa15.04■□□□□ -0
SCAMP4-201ENST00000316097 STARD10Q9Y365 291 aa15.04■□□□□ -0
SCAMP4-201ENST00000316097 KMT2EQ8IZD2 1858 aa15.04■□□□□ -0
SCAMP4-201ENST00000316097 PCSK5Q92824 1860 aa15.04■□□□□ -0
SCAMP4-201ENST00000316097 FBP1P09467 338 aa15.04■□□□□ -0
SCAMP4-201ENST00000316097 PMELP40967 661 aa15.04■□□□□ -0
SCAMP4-201ENST00000316097 ZNF41P51814 821 aaPredicted RBP15.04■□□□□ -0
SCAMP4-201ENST00000316097 CSNK2A1P68400 391 aaPredicted RBP15.04■□□□□ -0
SCAMP4-201ENST00000316097 DNM1P34Q6PK57 102 aa15.04■□□□□ -0
SCAMP4-201ENST00000316097 CSNK2A3Q8NEV1 391 aa15.04■□□□□ -0
SCAMP4-201ENST00000316097 OR51E1Q8TCB6 317 aa15.04■□□□□ -0
SCAMP4-201ENST00000316097 RNF138Q8WVD3 245 aa15.04■□□□□ -0
SCAMP4-201ENST00000316097 LSM5Q9Y4Y9 91 aaKnown RBP15.04■□□□□ -0
SCAMP4-201ENST00000316097 CPAMD8Q8IZJ3 1885 aa15.04■□□□□ -0
SCAMP4-201ENST00000316097 NPIPA5E9PKD4 350 aa15.03■□□□□ -0
SCAMP4-201ENST00000316097 GATCO43716 136 aaKnown RBP15.03■□□□□ -0
SCAMP4-201ENST00000316097 SULT1A1P50225 295 aa15.03■□□□□ -0
SCAMP4-201ENST00000316097 PCK2Q16822 640 aa15.03■□□□□ -0
SCAMP4-201ENST00000316097 DEFB124Q8NES8 71 aa15.03■□□□□ -0
SCAMP4-201ENST00000316097 M1APQ8TC57 530 aa15.03■□□□□ -0
SCAMP4-201ENST00000316097 SOX7Q9BT81 388 aa15.03■□□□□ -0
SCAMP4-201ENST00000316097 MED29Q9NX70 200 aa15.03■□□□□ -0
SCAMP4-201ENST00000316097 NPIPA1Q9UND3 350 aa15.03■□□□□ -0
SCAMP4-201ENST00000316097 SPAARA0A1B0GVQ0 90 aa15.03■□□□□ -0
SCAMP4-201ENST00000316097 A0A1W2PNR3 127 aa15.03■□□□□ -0
SCAMP4-201ENST00000316097 CRTAPO75718 401 aaPredicted RBP15.03■□□□□ -0
SCAMP4-201ENST00000316097 TNFSF15O95150 251 aa15.03■□□□□ -0
SCAMP4-201ENST00000316097 GAPDHP04406 335 aaKnown RBP15.03■□□□□ -0
SCAMP4-201ENST00000316097 PLPPR5Q32ZL2 321 aa15.03■□□□□ -0
SCAMP4-201ENST00000316097 OPN5Q6U736 354 aa15.03■□□□□ -0
SCAMP4-201ENST00000316097 OR2M3Q8NG83 312 aa15.03■□□□□ -0
SCAMP4-201ENST00000316097 LIN37Q96GY3 246 aaPredicted RBP15.03■□□□□ -0
SCAMP4-201ENST00000316097 C1orf147Q96MC9 270 aaPredicted RBP15.03■□□□□ -0
SCAMP4-201ENST00000316097 TMPRSS5Q9H3S3 457 aa15.03■□□□□ -0
SCAMP4-201ENST00000316097 P4HTMQ9NXG6 502 aa15.03■□□□□ -0
SCAMP4-201ENST00000316097 B3GALT5Q9Y2C3 310 aa15.03■□□□□ -0
SCAMP4-201ENST00000316097 FIGNL2A6NMB9 653 aa15.02■□□□□ -0
SCAMP4-201ENST00000316097 UMAD1C9J7I0 102 aa15.02■□□□□ -0
SCAMP4-201ENST00000316097 FTCDNL1E5RQL4 147 aa15.02■□□□□ -0
SCAMP4-201ENST00000316097 SCGB1D2O95969 90 aa15.02■□□□□ -0
SCAMP4-201ENST00000316097 SFTPDP35247 375 aa15.02■□□□□ -0
SCAMP4-201ENST00000316097 PTGER4P35408 488 aa15.02■□□□□ -0
SCAMP4-201ENST00000316097 THBS4P35443 961 aa15.02■□□□□ -0
SCAMP4-201ENST00000316097 SSR4P51571 173 aa15.02■□□□□ -0
SCAMP4-201ENST00000316097 SNU13P55769 128 aaKnown RBP15.02■□□□□ -0
SCAMP4-201ENST00000316097 DMRTC1Q5HYR2 192 aa15.02■□□□□ -0
SCAMP4-201ENST00000316097 OR10H5Q8NGA6 315 aa15.02■□□□□ -0
SCAMP4-201ENST00000316097 KCNG3Q8TAE7 436 aa15.02■□□□□ -0
SCAMP4-201ENST00000316097 CD300LFQ8TDQ1 290 aa15.02■□□□□ -0
SCAMP4-201ENST00000316097 ASB10Q8WXI3 467 aa15.02■□□□□ -0
SCAMP4-201ENST00000316097 ST8SIA1Q92185 356 aa15.02■□□□□ -0
SCAMP4-201ENST00000316097 PROK2Q9HC23 129 aa15.02■□□□□ -0
SCAMP4-201ENST00000316097 FAM212BQ9NTI7 297 aaPredicted RBP15.02■□□□□ -0
SCAMP4-201ENST00000316097 LAMA5O15230 3695 aa15.02■□□□□ -0
SCAMP4-201ENST00000316097 PPIHO43447 177 aaKnown RBP15.02□□□□□ -0.01
SCAMP4-201ENST00000316097 KLK2P20151 261 aa15.02□□□□□ -0.01
SCAMP4-201ENST00000316097 RBMXP38159 391 aaKnown RBP15.02□□□□□ -0.01
SCAMP4-201ENST00000316097 FHITP49789 147 aa15.02□□□□□ -0.01
SCAMP4-201ENST00000316097 FAM3AP98173 230 aa15.02□□□□□ -0.01
SCAMP4-201ENST00000316097 OR2B11Q5JQS5 317 aa15.02□□□□□ -0.01
SCAMP4-201ENST00000316097 C9orf152Q5JTZ5 239 aa15.02□□□□□ -0.01
SCAMP4-201ENST00000316097 ZNF529Q6P280 563 aa15.02□□□□□ -0.01
SCAMP4-201ENST00000316097 ERGIC1Q969X5 290 aa15.02□□□□□ -0.01
SCAMP4-201ENST00000316097 PRRX2Q99811 253 aa15.02□□□□□ -0.01
SCAMP4-201ENST00000316097 GGACTQ9BVM4 153 aa15.02□□□□□ -0.01
SCAMP4-201ENST00000316097 MS4A18H0YCH9 400 aa15.01□□□□□ -0.01
SCAMP4-201ENST00000316097 WRBO00258 174 aa15.01□□□□□ -0.01
SCAMP4-201ENST00000316097 HCKP08631 526 aa15.01□□□□□ -0.01
SCAMP4-201ENST00000316097 SLC2A1P11166 492 aa15.01□□□□□ -0.01
SCAMP4-201ENST00000316097 APOBEC1P41238 236 aaKnown RBP15.01□□□□□ -0.01
SCAMP4-201ENST00000316097 RAB2AP61019 212 aa15.01□□□□□ -0.01
SCAMP4-201ENST00000316097 POU3F1Q03052 451 aaPredicted RBP15.01□□□□□ -0.01
SCAMP4-201ENST00000316097 MS4A18Q3C1V0 323 aa15.01□□□□□ -0.01
SCAMP4-201ENST00000316097 OR5AS1Q8N127 324 aa15.01□□□□□ -0.01
SCAMP4-201ENST00000316097 ZNF565Q8N9K5 539 aa15.01□□□□□ -0.01
SCAMP4-201ENST00000316097 C11orf40Q8WZ69 217 aa15.01□□□□□ -0.01
SCAMP4-201ENST00000316097 DDA1Q9BW61 102 aa15.01□□□□□ -0.01
SCAMP4-201ENST00000316097 C1orf123Q9NWV4 160 aa15.01□□□□□ -0.01
SCAMP4-201ENST00000316097 IL17BQ9UHF5 180 aa15.01□□□□□ -0.01
SCAMP4-201ENST00000316097 RIF1Q5UIP0 2472 aaKnown RBP15.01□□□□□ -0.01
SCAMP4-201ENST00000316097 CCDC187A0A096LP49 1063 aa15.01□□□□□ -0.01
SCAMP4-201ENST00000316097 A0A0G2JMM0 328 aa15.01□□□□□ -0.01
SCAMP4-201ENST00000316097 A0A1W2PPB8 328 aa15.01□□□□□ -0.01
SCAMP4-201ENST00000316097 A0A1W2PRS3 328 aa15.01□□□□□ -0.01
SCAMP4-201ENST00000316097 A6NIZ1 184 aa15.01□□□□□ -0.01
SCAMP4-201ENST00000316097 KIR3DP1A8MWS1 328 aa15.01□□□□□ -0.01
SCAMP4-201ENST00000316097 TP53I11O14683 189 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms