RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.18□□□□□ -0.62
RETREG3-201ENST00000309428 OR2B11Q5JQS5 317 aa11.18□□□□□ -0.62
RETREG3-201ENST00000309428 DDIT4LQ96D03 193 aa11.18□□□□□ -0.62
RETREG3-201ENST00000309428 BORCS8Q96FH0 119 aa11.18□□□□□ -0.62
RETREG3-201ENST00000309428 SYT3Q9BQG1 590 aa11.18□□□□□ -0.62
RETREG3-201ENST00000309428 ZCCHC4Q9H5U6 513 aa11.18□□□□□ -0.62
RETREG3-201ENST00000309428 AP4M1O00189 453 aa11.18□□□□□ -0.62
RETREG3-201ENST00000309428 SSSCA1O60232 199 aa11.18□□□□□ -0.62
RETREG3-201ENST00000309428 POU2F2P09086 479 aa11.18□□□□□ -0.62
RETREG3-201ENST00000309428 ZBTB25P24278 435 aa11.18□□□□□ -0.62
RETREG3-201ENST00000309428 S100GP29377 79 aa11.18□□□□□ -0.62
RETREG3-201ENST00000309428 ZNF121P58317 390 aaPredicted RBP11.18□□□□□ -0.62
RETREG3-201ENST00000309428 TAS2R46P59540 309 aa11.18□□□□□ -0.62
RETREG3-201ENST00000309428 C17orf67Q0P5P2 114 aa11.18□□□□□ -0.62
RETREG3-201ENST00000309428 TRIM61Q5EBN2 209 aa11.18□□□□□ -0.62
RETREG3-201ENST00000309428 PRSS54Q6PEW0 395 aa11.18□□□□□ -0.62
RETREG3-201ENST00000309428 PIGCQ92535 297 aa11.18□□□□□ -0.62
RETREG3-201ENST00000309428 MRPL24Q96A35 216 aaKnown RBP11.18□□□□□ -0.62
RETREG3-201ENST00000309428 COL6A6A6NMZ7 2263 aa11.17□□□□□ -0.62
RETREG3-201ENST00000309428 ALG1L2C9J202 215 aa11.17□□□□□ -0.62
RETREG3-201ENST00000309428 C3orf80F5H4A9 247 aa11.17□□□□□ -0.62
RETREG3-201ENST00000309428 SOX15O60248 233 aa11.17□□□□□ -0.62
RETREG3-201ENST00000309428 SCGB1D1O95968 90 aa11.17□□□□□ -0.62
RETREG3-201ENST00000309428 BGLAPP02818 100 aa11.17□□□□□ -0.62
RETREG3-201ENST00000309428 CCL2P13500 99 aa11.17□□□□□ -0.62
RETREG3-201ENST00000309428 GABREP78334 506 aa11.17□□□□□ -0.62
RETREG3-201ENST00000309428 SLC22A25Q6T423 547 aa11.17□□□□□ -0.62
RETREG3-201ENST00000309428 RTN4IP1Q8WWV3 396 aaPredicted RBP11.17□□□□□ -0.62
RETREG3-201ENST00000309428 DYRK2Q92630 601 aa11.17□□□□□ -0.62
RETREG3-201ENST00000309428 SDSLQ96GA7 329 aa11.17□□□□□ -0.62
RETREG3-201ENST00000309428 PISDQ9UG56 409 aa11.17□□□□□ -0.62
RETREG3-201ENST00000309428 NCOA6Q14686 2063 aaPredicted RBP11.17□□□□□ -0.62
RETREG3-201ENST00000309428 OR5H15A6NDH6 313 aa11.17□□□□□ -0.62
RETREG3-201ENST00000309428 LILRA5A6NI73 299 aa11.17□□□□□ -0.62
RETREG3-201ENST00000309428 SMIM6P0DI80 62 aa11.17□□□□□ -0.62
RETREG3-201ENST00000309428 SLC25A1P53007 311 aa11.17□□□□□ -0.62
RETREG3-201ENST00000309428 PCK2Q16822 640 aa11.17□□□□□ -0.62
RETREG3-201ENST00000309428 LILRB2Q8N423 598 aa11.17□□□□□ -0.62
RETREG3-201ENST00000309428 OR51H1Q8NH63 302 aa11.17□□□□□ -0.62
RETREG3-201ENST00000309428 PAPOLGQ9BWT3 736 aaKnown RBP11.17□□□□□ -0.62
RETREG3-201ENST00000309428 MMACHCQ9Y4U1 282 aa11.17□□□□□ -0.62
RETREG3-201ENST00000309428 A0A1B0GV90 55 aa11.17□□□□□ -0.62
RETREG3-201ENST00000309428 A0A1W2PQM1 296 aa11.17□□□□□ -0.62
RETREG3-201ENST00000309428 A0A1W2PR77 199 aa11.17□□□□□ -0.62
RETREG3-201ENST00000309428 CXorf65A6NEN9 183 aa11.17□□□□□ -0.62
RETREG3-201ENST00000309428 ZNF814B7Z6K7 855 aa11.17□□□□□ -0.62
RETREG3-201ENST00000309428 ST8SIA3O43173 380 aa11.17□□□□□ -0.62
RETREG3-201ENST00000309428 ZNF574Q6ZN55 896 aaPredicted RBP11.17□□□□□ -0.62
RETREG3-201ENST00000309428 LINC00696Q6ZRV3 163 aa11.17□□□□□ -0.62
RETREG3-201ENST00000309428 HIST1H2BAQ96A08 127 aa11.17□□□□□ -0.62
RETREG3-201ENST00000309428 OR5B12Q96R08 314 aa11.17□□□□□ -0.62
RETREG3-201ENST00000309428 C19orf12Q9NSK7 152 aa11.17□□□□□ -0.62
RETREG3-201ENST00000309428 HSF4Q9ULV5 492 aa11.17□□□□□ -0.62
RETREG3-201ENST00000309428 A0A1W2PPE3 182 aa11.16□□□□□ -0.62
RETREG3-201ENST00000309428 C5orf63A6NC05 138 aa11.16□□□□□ -0.62
RETREG3-201ENST00000309428 FAM24AA6NFZ4 105 aa11.16□□□□□ -0.62
RETREG3-201ENST00000309428 A6NIZ1 184 aa11.16□□□□□ -0.62
RETREG3-201ENST00000309428 SHISA7A6NL88 538 aa11.16□□□□□ -0.62
RETREG3-201ENST00000309428 CEBPZOSA8MTT3 80 aa11.16□□□□□ -0.62
RETREG3-201ENST00000309428 ZFAND5O76080 213 aa11.16□□□□□ -0.62
RETREG3-201ENST00000309428 SFT2D2O95562 160 aa11.16□□□□□ -0.62
RETREG3-201ENST00000309428 CHRM2P08172 466 aa11.16□□□□□ -0.62
RETREG3-201ENST00000309428 BMP5P22003 454 aa11.16□□□□□ -0.62
RETREG3-201ENST00000309428 RAP1BP61224 184 aa11.16□□□□□ -0.62
RETREG3-201ENST00000309428 FAM189A2Q15884 450 aa11.16□□□□□ -0.62
RETREG3-201ENST00000309428 TMEM268Q5VZI3 342 aa11.16□□□□□ -0.62
RETREG3-201ENST00000309428 GGNBP1Q5YKI7 109 aa11.16□□□□□ -0.62
RETREG3-201ENST00000309428 ZNF343Q6P1L6 599 aa11.16□□□□□ -0.62
RETREG3-201ENST00000309428 ZNF501Q96CX3 271 aaPredicted RBP11.16□□□□□ -0.62
RETREG3-201ENST00000309428 PRRG4Q9BZD6 226 aa11.16□□□□□ -0.62
RETREG3-201ENST00000309428 PIGLQ9Y2B2 252 aa11.16□□□□□ -0.62
RETREG3-201ENST00000309428 LIPGQ9Y5X9 500 aa11.16□□□□□ -0.62
RETREG3-201ENST00000309428 A0A096LPE4 126 aa11.16□□□□□ -0.62
RETREG3-201ENST00000309428 A0A1W2PPZ6 126 aa11.16□□□□□ -0.62
RETREG3-201ENST00000309428 DUSP1P28562 367 aa11.16□□□□□ -0.62
RETREG3-201ENST00000309428 ANKRD37Q7Z713 158 aa11.16□□□□□ -0.62
RETREG3-201ENST00000309428 OR4A4PQ8NGN8 299 aa11.16□□□□□ -0.62
RETREG3-201ENST00000309428 SNX22Q96L94 193 aa11.16□□□□□ -0.62
RETREG3-201ENST00000309428 TMPRSS5Q9H3S3 457 aa11.16□□□□□ -0.62
RETREG3-201ENST00000309428 RCC2Q9P258 522 aaKnown RBP11.16□□□□□ -0.62
RETREG3-201ENST00000309428 C9J4A7 227 aa11.16□□□□□ -0.62
RETREG3-201ENST00000309428 CST4P01036 141 aa11.16□□□□□ -0.62
RETREG3-201ENST00000309428 MMP7P09237 267 aaPredicted RBP11.16□□□□□ -0.62
RETREG3-201ENST00000309428 OPN5Q6U736 354 aa11.16□□□□□ -0.62
RETREG3-201ENST00000309428 SKA3Q8IX90 412 aa11.16□□□□□ -0.62
RETREG3-201ENST00000309428 CPNE4Q96A23 557 aaPredicted RBP11.16□□□□□ -0.62
RETREG3-201ENST00000309428 FAAP24Q9BTP7 215 aa11.16□□□□□ -0.62
RETREG3-201ENST00000309428 GPR61Q9BZJ8 451 aa11.16□□□□□ -0.62
RETREG3-201ENST00000309428 ZNF587BE7ETH6 402 aa11.15□□□□□ -0.62
RETREG3-201ENST00000309428 RAB27BO00194 218 aa11.15□□□□□ -0.62
RETREG3-201ENST00000309428 TNFSF11O14788 317 aa11.15□□□□□ -0.62
RETREG3-201ENST00000309428 ATXN7O15265 892 aaPredicted RBP11.15□□□□□ -0.62
RETREG3-201ENST00000309428 IGHG1P01857 330 aa11.15□□□□□ -0.62
RETREG3-201ENST00000309428 IGKV3-11P04433 115 aa11.15□□□□□ -0.62
RETREG3-201ENST00000309428 FBP1P09467 338 aa11.15□□□□□ -0.62
RETREG3-201ENST00000309428 ADCYAP1P18509 176 aa11.15□□□□□ -0.62
RETREG3-201ENST00000309428 NHLH2Q02577 135 aa11.15□□□□□ -0.62
RETREG3-201ENST00000309428 ANKRD55Q3KP44 614 aa11.15□□□□□ -0.62
RETREG3-201ENST00000309428 CMTM1Q8IZ96 169 aa11.15□□□□□ -0.62
RETREG3-201ENST00000309428 ZDHHC22Q8N966 263 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms