RNA–Protein interactions for RNA: ENST00000294785.9

NCSTN-201, Transcript of nicastrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCSTN, Length 2,936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-201ENST00000294785 FCGR3AP08637 254 aa11.91□□□□□ -0.5
NCSTN-201ENST00000294785 CHATP28329 748 aa11.91□□□□□ -0.5
NCSTN-201ENST00000294785 TRA2AQ13595 282 aaKnown RBP eCLIP11.91□□□□□ -0.5
NCSTN-201ENST00000294785 KRTAP27-1Q3LI81 207 aa11.91□□□□□ -0.5
NCSTN-201ENST00000294785 ZNF528Q3MIS6 628 aa11.91□□□□□ -0.5
NCSTN-201ENST00000294785 RPS19BP1Q86WX3 136 aaKnown RBP11.91□□□□□ -0.5
NCSTN-201ENST00000294785 CBLN2Q8IUK8 224 aa11.91□□□□□ -0.5
NCSTN-201ENST00000294785 IFI44Q8TCB0 444 aa11.91□□□□□ -0.5
NCSTN-201ENST00000294785 BORCS8Q96FH0 119 aa11.91□□□□□ -0.5
NCSTN-201ENST00000294785 HDHD3Q9BSH5 251 aaPredicted RBP11.91□□□□□ -0.5
NCSTN-201ENST00000294785 TMEM231Q9H6L2 316 aa11.91□□□□□ -0.5
NCSTN-201ENST00000294785 NAA60Q9H7X0 242 aa11.91□□□□□ -0.5
NCSTN-201ENST00000294785 FBXL17Q9UF56 701 aa11.91□□□□□ -0.5
NCSTN-201ENST00000294785 NSG2Q9Y328 171 aa11.91□□□□□ -0.5
NCSTN-201ENST00000294785 HS3ST3B1Q9Y662 390 aa11.91□□□□□ -0.5
NCSTN-201ENST00000294785 PRUNE2Q8WUY3 3088 aa11.91□□□□□ -0.5
NCSTN-201ENST00000294785 FBXO24O75426 580 aa11.9□□□□□ -0.5
NCSTN-201ENST00000294785 ZNF728P0DKX0 622 aa11.9□□□□□ -0.5
NCSTN-201ENST00000294785 RFC3P40938 356 aa11.9□□□□□ -0.5
NCSTN-201ENST00000294785 PIGPP57054 158 aa11.9□□□□□ -0.5
NCSTN-201ENST00000294785 TMEM33P57088 247 aa11.9□□□□□ -0.5
NCSTN-201ENST00000294785 MLF1P58340 268 aa11.9□□□□□ -0.5
NCSTN-201ENST00000294785 HLA-BQ31612 363 aa11.9□□□□□ -0.5
NCSTN-201ENST00000294785 OR2A2Q6IF42 318 aa11.9□□□□□ -0.5
NCSTN-201ENST00000294785 FOXRED2Q8IWF2 684 aa11.9□□□□□ -0.5
NCSTN-201ENST00000294785 AGBL5Q8NDL9 886 aa11.9□□□□□ -0.5
NCSTN-201ENST00000294785 MR1Q95460 341 aa11.9□□□□□ -0.5
NCSTN-201ENST00000294785 POM121Q96HA1 1249 aa11.9□□□□□ -0.5
NCSTN-201ENST00000294785 JSRP1Q96MG2 331 aaPredicted RBP11.9□□□□□ -0.5
NCSTN-201ENST00000294785 TECTBQ96PL2 329 aa11.9□□□□□ -0.5
NCSTN-201ENST00000294785 FAAP24Q9BTP7 215 aa11.9□□□□□ -0.5
NCSTN-201ENST00000294785 ADAT1Q9BUB4 502 aaKnown RBP11.9□□□□□ -0.5
NCSTN-201ENST00000294785 SRXN1Q9BYN0 137 aa11.9□□□□□ -0.5
NCSTN-201ENST00000294785 TMEM38BQ9NVV0 291 aa11.9□□□□□ -0.5
NCSTN-201ENST00000294785 AMDHD2Q9Y303 409 aa11.9□□□□□ -0.5
NCSTN-201ENST00000294785 OR6C6A6NF89 314 aa11.9□□□□□ -0.5
NCSTN-201ENST00000294785 ZNF850A8MQ14 1090 aa11.9□□□□□ -0.5
NCSTN-201ENST00000294785 MSTNO14793 375 aa11.9□□□□□ -0.5
NCSTN-201ENST00000294785 RCC1P18754 421 aaPredicted RBP11.9□□□□□ -0.5
NCSTN-201ENST00000294785 NPBWR1P48145 328 aa11.9□□□□□ -0.5
NCSTN-201ENST00000294785 DVL1P1P54792 670 aaPredicted RBP11.9□□□□□ -0.5
NCSTN-201ENST00000294785 TAF9Q16594 264 aa11.9□□□□□ -0.5
NCSTN-201ENST00000294785 ABCA11PQ4W5N1 156 aa11.9□□□□□ -0.5
NCSTN-201ENST00000294785 SKA3Q8IX90 412 aa11.9□□□□□ -0.5
NCSTN-201ENST00000294785 OR2Y1Q8NGV0 311 aa11.9□□□□□ -0.5
NCSTN-201ENST00000294785 MRPL24Q96A35 216 aaKnown RBP11.9□□□□□ -0.5
NCSTN-201ENST00000294785 SGCZQ96LD1 299 aa11.9□□□□□ -0.5
NCSTN-201ENST00000294785 PI4KAP42356 2102 aa11.9□□□□□ -0.5
NCSTN-201ENST00000294785 FAM230AA0A1W2PPH8 454 aa11.9□□□□□ -0.51
NCSTN-201ENST00000294785 SFTA3P0C7M3 94 aa11.9□□□□□ -0.51
NCSTN-201ENST00000294785 SRD5A2P31213 254 aa11.9□□□□□ -0.51
NCSTN-201ENST00000294785 PMELP40967 661 aa11.9□□□□□ -0.51
NCSTN-201ENST00000294785 CHAF1BQ13112 559 aa11.9□□□□□ -0.51
NCSTN-201ENST00000294785 TMEM187Q14656 261 aa11.9□□□□□ -0.51
NCSTN-201ENST00000294785 COMMD1Q8N668 190 aa11.9□□□□□ -0.51
NCSTN-201ENST00000294785 OR2AE1Q8NHA4 323 aa11.9□□□□□ -0.51
NCSTN-201ENST00000294785 ZNF837Q96EG3 531 aaPredicted RBP11.9□□□□□ -0.51
NCSTN-201ENST00000294785 ARV1Q9H2C2 271 aa11.9□□□□□ -0.51
NCSTN-201ENST00000294785 BCO1Q9HAY6 547 aa11.9□□□□□ -0.51
NCSTN-201ENST00000294785 IGKV1-27A0A075B6S5 117 aa11.89□□□□□ -0.51
NCSTN-201ENST00000294785 CCDC163A0A0D9SF12 145 aa11.89□□□□□ -0.51
NCSTN-201ENST00000294785 NME2P22392 152 aa11.89□□□□□ -0.51
NCSTN-201ENST00000294785 UCP3P55916 312 aa11.89□□□□□ -0.51
NCSTN-201ENST00000294785 OR8B8Q15620 311 aa11.89□□□□□ -0.51
NCSTN-201ENST00000294785 HMGN3Q15651 99 aa11.89□□□□□ -0.51
NCSTN-201ENST00000294785 SWI5Q1ZZU3 235 aa11.89□□□□□ -0.51
NCSTN-201ENST00000294785 SYT3Q9BQG1 590 aa11.89□□□□□ -0.51
NCSTN-201ENST00000294785 FAM212BQ9NTI7 297 aaPredicted RBP11.89□□□□□ -0.51
NCSTN-201ENST00000294785 PILRBQ9UKJ0 227 aa11.89□□□□□ -0.51
NCSTN-201ENST00000294785 FAM96BQ9Y3D0 163 aa11.89□□□□□ -0.51
NCSTN-201ENST00000294785 LSM5Q9Y4Y9 91 aaKnown RBP11.89□□□□□ -0.51
NCSTN-201ENST00000294785 MED12Q93074 2177 aa11.89□□□□□ -0.51
NCSTN-201ENST00000294785 NSG1A0A0A6YYJ2 146 aa11.89□□□□□ -0.51
NCSTN-201ENST00000294785 SPRY1O43609 319 aaPredicted RBP11.89□□□□□ -0.51
NCSTN-201ENST00000294785 ANGPTL7O43827 346 aa11.89□□□□□ -0.51
NCSTN-201ENST00000294785 NRASP01111 189 aa11.89□□□□□ -0.51
NCSTN-201ENST00000294785 LCATP04180 440 aa11.89□□□□□ -0.51
NCSTN-201ENST00000294785 PAX6P26367 422 aa11.89□□□□□ -0.51
NCSTN-201ENST00000294785 HOXA1P49639 335 aaPredicted RBP11.89□□□□□ -0.51
NCSTN-201ENST00000294785 RAB13P51153 203 aa11.89□□□□□ -0.51
NCSTN-201ENST00000294785 FAM76BQ5HYJ3 339 aa11.89□□□□□ -0.51
NCSTN-201ENST00000294785 GPR157Q5UAW9 335 aa11.89□□□□□ -0.51
NCSTN-201ENST00000294785 ZNF774Q6NX45 483 aa11.89□□□□□ -0.51
NCSTN-201ENST00000294785 OSR2Q8N2R0 312 aa11.89□□□□□ -0.51
NCSTN-201ENST00000294785 RTN4IP1Q8WWV3 396 aaPredicted RBP11.89□□□□□ -0.51
NCSTN-201ENST00000294785 IER2Q9BTL4 223 aa11.89□□□□□ -0.51
NCSTN-201ENST00000294785 SAV1Q9H4B6 383 aaPredicted RBP11.89□□□□□ -0.51
NCSTN-201ENST00000294785 CRLF2Q9HC73 371 aa11.89□□□□□ -0.51
NCSTN-201ENST00000294785 FARS2O95363 451 aaKnown RBP11.88□□□□□ -0.51
NCSTN-201ENST00000294785 SEC11BP0C7V7 166 aa11.88□□□□□ -0.51
NCSTN-201ENST00000294785 FUT6P51993 359 aa11.88□□□□□ -0.51
NCSTN-201ENST00000294785 B3GALT5-AS1P59052 145 aa11.88□□□□□ -0.51
NCSTN-201ENST00000294785 PCBD1P61457 104 aa11.88□□□□□ -0.51
NCSTN-201ENST00000294785 RIPPLY2Q5TAB7 128 aa11.88□□□□□ -0.51
NCSTN-201ENST00000294785 PMS2CLQ68D20 193 aa11.88□□□□□ -0.51
NCSTN-201ENST00000294785 Q6ZRG5 221 aa11.88□□□□□ -0.51
NCSTN-201ENST00000294785 WNT2BQ93097 391 aa11.88□□□□□ -0.51
NCSTN-201ENST00000294785 SULT4A1Q9BR01 284 aa11.88□□□□□ -0.51
NCSTN-201ENST00000294785 LIME1Q9H400 295 aa11.88□□□□□ -0.51
NCSTN-201ENST00000294785 ZNF286AQ9HBT8 521 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms