RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 ZNF121P58317 390 aaPredicted RBP14.85□□□□□ -0.03
FOXA1-201ENST00000250448 TAS2R46P59540 309 aa14.85□□□□□ -0.03
FOXA1-201ENST00000250448 RAB5BP61020 215 aa14.85□□□□□ -0.03
FOXA1-201ENST00000250448 RBM39Q14498 530 aaKnown RBP14.85□□□□□ -0.03
FOXA1-201ENST00000250448 SWI5Q1ZZU3 235 aa14.85□□□□□ -0.03
FOXA1-201ENST00000250448 TMEM268Q5VZI3 342 aa14.85□□□□□ -0.03
FOXA1-201ENST00000250448 OR2M3Q8NG83 312 aa14.85□□□□□ -0.03
FOXA1-201ENST00000250448 OR2AJ1Q8NGZ0 328 aa14.85□□□□□ -0.03
FOXA1-201ENST00000250448 POC1BQ8TC44 478 aa14.85□□□□□ -0.03
FOXA1-201ENST00000250448 PROK2Q9HC23 129 aa14.85□□□□□ -0.03
FOXA1-201ENST00000250448 SMCO4Q9NRQ5 59 aa14.85□□□□□ -0.03
FOXA1-201ENST00000250448 FIGNL2A6NMB9 653 aa14.84□□□□□ -0.03
FOXA1-201ENST00000250448 TERTO14746 1132 aaKnown RBP14.84□□□□□ -0.03
FOXA1-201ENST00000250448 PTGFRP43088 359 aa14.84□□□□□ -0.03
FOXA1-201ENST00000250448 SNU13P55769 128 aaKnown RBP14.84□□□□□ -0.03
FOXA1-201ENST00000250448 HABP2Q14520 560 aaPredicted RBP14.84□□□□□ -0.03
FOXA1-201ENST00000250448 PLPPR5Q32ZL2 321 aa14.84□□□□□ -0.03
FOXA1-201ENST00000250448 FOXRED2Q8IWF2 684 aa14.84□□□□□ -0.03
FOXA1-201ENST00000250448 MRPL13Q9BYD1 178 aaKnown RBP14.84□□□□□ -0.03
FOXA1-201ENST00000250448 OR10A2Q9H208 303 aa14.84□□□□□ -0.03
FOXA1-201ENST00000250448 A0A1W2PNV4 684 aa14.84□□□□□ -0.03
FOXA1-201ENST00000250448 C9JQL5 133 aa14.84□□□□□ -0.03
FOXA1-201ENST00000250448 EIF3GO75821 320 aaKnown RBP eCLIP14.84□□□□□ -0.03
FOXA1-201ENST00000250448 ANOS1P23352 680 aa14.84□□□□□ -0.03
FOXA1-201ENST00000250448 FAM76BQ5HYJ3 339 aa14.84□□□□□ -0.03
FOXA1-201ENST00000250448 BEND4Q6ZU67 534 aa14.84□□□□□ -0.03
FOXA1-201ENST00000250448 MAFIPQ8WZ33 124 aa14.84□□□□□ -0.03
FOXA1-201ENST00000250448 SULT4A1Q9BR01 284 aa14.84□□□□□ -0.03
FOXA1-201ENST00000250448 PARP11Q9NR21 331 aa14.84□□□□□ -0.03
FOXA1-201ENST00000250448 ZNF319Q9P2F9 582 aa14.84□□□□□ -0.03
FOXA1-201ENST00000250448 B3GAT1Q9P2W7 334 aa14.84□□□□□ -0.03
FOXA1-201ENST00000250448 CD63P08962 238 aa14.83□□□□□ -0.03
FOXA1-201ENST00000250448 ZNF708P17019 499 aa14.83□□□□□ -0.03
FOXA1-201ENST00000250448 ADH6P28332 368 aa14.83□□□□□ -0.03
FOXA1-201ENST00000250448 F2RL1P55085 397 aa14.83□□□□□ -0.03
FOXA1-201ENST00000250448 SUMO3P55854 103 aaPredicted RBP14.83□□□□□ -0.03
FOXA1-201ENST00000250448 CLRN1P58418 232 aa14.83□□□□□ -0.03
FOXA1-201ENST00000250448 CHAF1BQ13112 559 aa14.83□□□□□ -0.03
FOXA1-201ENST00000250448 ACER2Q5QJU3 275 aa14.83□□□□□ -0.03
FOXA1-201ENST00000250448 THEM4Q5T1C6 240 aa14.83□□□□□ -0.03
FOXA1-201ENST00000250448 NSUN5P2Q63ZY6 315 aa14.83□□□□□ -0.03
FOXA1-201ENST00000250448 VASH2Q86V25 355 aa14.83□□□□□ -0.03
FOXA1-201ENST00000250448 NOXO1Q8NFA2 376 aa14.83□□□□□ -0.03
FOXA1-201ENST00000250448 PSMF1Q92530 271 aa14.83□□□□□ -0.03
FOXA1-201ENST00000250448 EMG1Q92979 244 aaKnown RBP14.83□□□□□ -0.03
FOXA1-201ENST00000250448 POMT1Q9Y6A1 747 aa14.83□□□□□ -0.03
FOXA1-201ENST00000250448 FAM157AC9JC47 383 aa14.83□□□□□ -0.04
FOXA1-201ENST00000250448 CST4P01036 141 aa14.83□□□□□ -0.04
FOXA1-201ENST00000250448 PAX6P26367 422 aa14.83□□□□□ -0.04
FOXA1-201ENST00000250448 PTGER4P35408 488 aa14.83□□□□□ -0.04
FOXA1-201ENST00000250448 MAJINQ3KP22 176 aa14.83□□□□□ -0.04
FOXA1-201ENST00000250448 OR2A2Q6IF42 318 aa14.83□□□□□ -0.04
FOXA1-201ENST00000250448 DHRS11Q6UWP2 260 aa14.83□□□□□ -0.04
FOXA1-201ENST00000250448 Q6ZRG5 221 aa14.83□□□□□ -0.04
FOXA1-201ENST00000250448 OR51T1Q8NGJ9 327 aa14.83□□□□□ -0.04
FOXA1-201ENST00000250448 KIRREL1Q96J84 757 aa14.83□□□□□ -0.04
FOXA1-201ENST00000250448 OR5B2Q96R09 309 aa14.83□□□□□ -0.04
FOXA1-201ENST00000250448 PLA2G2EQ9NZK7 142 aa14.83□□□□□ -0.04
FOXA1-201ENST00000250448 A0A1W2PNR3 127 aa14.83□□□□□ -0.04
FOXA1-201ENST00000250448 ACAA1P09110 424 aaPredicted RBP14.83□□□□□ -0.04
FOXA1-201ENST00000250448 ZNF17P17021 662 aa14.83□□□□□ -0.04
FOXA1-201ENST00000250448 CCL1P22362 96 aa14.83□□□□□ -0.04
FOXA1-201ENST00000250448 SFTPDP35247 375 aa14.83□□□□□ -0.04
FOXA1-201ENST00000250448 C15orf54Q8N8G6 183 aa14.83□□□□□ -0.04
FOXA1-201ENST00000250448 C14orf79Q96F83 325 aa14.83□□□□□ -0.04
FOXA1-201ENST00000250448 CNTNAP3Q9BZ76 1288 aa14.83□□□□□ -0.04
FOXA1-201ENST00000250448 ASH2LQ9UBL3 628 aa14.83□□□□□ -0.04
FOXA1-201ENST00000250448 C14orf166Q9Y224 244 aaKnown RBP14.83□□□□□ -0.04
FOXA1-201ENST00000250448 CDAP32320 146 aa14.82□□□□□ -0.04
FOXA1-201ENST00000250448 ID4P47928 161 aa14.82□□□□□ -0.04
FOXA1-201ENST00000250448 DVL1P1P54792 670 aaPredicted RBP14.82□□□□□ -0.04
FOXA1-201ENST00000250448 SURF2Q15527 256 aaPredicted RBP14.82□□□□□ -0.04
FOXA1-201ENST00000250448 AKIRIN2Q53H80 203 aa14.82□□□□□ -0.04
FOXA1-201ENST00000250448 ASCL5Q7RTU5 278 aa14.82□□□□□ -0.04
FOXA1-201ENST00000250448 SSC4DQ8WTU2 575 aa14.82□□□□□ -0.04
FOXA1-201ENST00000250448 GPR87Q9BY21 358 aa14.82□□□□□ -0.04
FOXA1-201ENST00000250448 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.82□□□□□ -0.04
FOXA1-201ENST00000250448 FBXL17Q9UF56 701 aa14.82□□□□□ -0.04
FOXA1-201ENST00000250448 IGKV1-9A0A0C4DH69 117 aa14.82□□□□□ -0.04
FOXA1-201ENST00000250448 C21orf140B9A014 251 aa14.82□□□□□ -0.04
FOXA1-201ENST00000250448 KNG1P01042 644 aa14.82□□□□□ -0.04
FOXA1-201ENST00000250448 SERPINA7P05543 415 aa14.82□□□□□ -0.04
FOXA1-201ENST00000250448 HPNP05981 417 aa14.82□□□□□ -0.04
FOXA1-201ENST00000250448 PTAFRP25105 342 aa14.82□□□□□ -0.04
FOXA1-201ENST00000250448 RPL12P30050 165 aaKnown RBP14.82□□□□□ -0.04
FOXA1-201ENST00000250448 RBMXP38159 391 aaKnown RBP14.82□□□□□ -0.04
FOXA1-201ENST00000250448 NOVA1P51513 510 aaKnown RBP14.82□□□□□ -0.04
FOXA1-201ENST00000250448 SNRPEP62304 92 aaKnown RBP14.82□□□□□ -0.04
FOXA1-201ENST00000250448 IAH1Q2TAA2 248 aaPredicted RBP14.82□□□□□ -0.04
FOXA1-201ENST00000250448 DOK3Q7L591 496 aa14.82□□□□□ -0.04
FOXA1-201ENST00000250448 UEVLDQ8IX04 471 aa14.82□□□□□ -0.04
FOXA1-201ENST00000250448 FAM89BQ8N5H3 189 aa14.82□□□□□ -0.04
FOXA1-201ENST00000250448 C1orf123Q9NWV4 160 aa14.82□□□□□ -0.04
FOXA1-201ENST00000250448 K7EPK0 472 aa14.81□□□□□ -0.04
FOXA1-201ENST00000250448 IFNA2P01563 188 aa14.81□□□□□ -0.04
FOXA1-201ENST00000250448 IGHG1P01857 330 aa14.81□□□□□ -0.04
FOXA1-201ENST00000250448 GAPDHP04406 335 aaKnown RBP14.81□□□□□ -0.04
FOXA1-201ENST00000250448 PGA4P0DJD7 388 aa14.81□□□□□ -0.04
FOXA1-201ENST00000250448 PGA3P0DJD8 388 aa14.81□□□□□ -0.04
FOXA1-201ENST00000250448 ETV3LQ6ZN32 361 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms