RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 GGACTQ9BVM4 153 aa13.55□□□□□ -0.24
DDX55-201ENST00000238146 TMEM106CQ9BVX2 250 aa13.55□□□□□ -0.24
DDX55-201ENST00000238146 CHST5Q9GZS9 411 aa13.55□□□□□ -0.24
DDX55-201ENST00000238146 KLRF1Q9NZS2 232 aa13.55□□□□□ -0.24
DDX55-201ENST00000238146 CLEC1BQ9P126 229 aa13.55□□□□□ -0.24
DDX55-201ENST00000238146 V9GYS6 101 aa13.55□□□□□ -0.24
DDX55-201ENST00000238146 F5H5K5 113 aa13.55□□□□□ -0.24
DDX55-201ENST00000238146 IFNA17P01571 189 aa13.55□□□□□ -0.24
DDX55-201ENST00000238146 HTR5AP47898 357 aa13.55□□□□□ -0.24
DDX55-201ENST00000238146 CFHR1Q03591 330 aa13.55□□□□□ -0.24
DDX55-201ENST00000238146 OGFOD3Q6PK18 319 aa13.55□□□□□ -0.24
DDX55-201ENST00000238146 HEPN1Q6WQI6 88 aa13.55□□□□□ -0.24
DDX55-201ENST00000238146 HIST2H3AQ71DI3 136 aa13.55□□□□□ -0.24
DDX55-201ENST00000238146 DEFB119Q8N690 84 aa13.55□□□□□ -0.24
DDX55-201ENST00000238146 OR52M1Q8NGK5 317 aa13.55□□□□□ -0.24
DDX55-201ENST00000238146 STT3BQ8TCJ2 826 aa13.55□□□□□ -0.24
DDX55-201ENST00000238146 REEP6Q96HR9 211 aa13.55□□□□□ -0.24
DDX55-201ENST00000238146 FAAP24Q9BTP7 215 aa13.55□□□□□ -0.24
DDX55-201ENST00000238146 ZNF160Q9HCG1 818 aa13.55□□□□□ -0.24
DDX55-201ENST00000238146 PUS1Q9Y606 427 aaKnown RBP eCLIP13.55□□□□□ -0.24
DDX55-201ENST00000238146 LAMA1P25391 3075 aa13.54□□□□□ -0.24
DDX55-201ENST00000238146 H7C1Q1 480 aa13.54□□□□□ -0.24
DDX55-201ENST00000238146 OR2C1O95371 312 aa13.54□□□□□ -0.24
DDX55-201ENST00000238146 ZNF728P0DKX0 622 aa13.54□□□□□ -0.24
DDX55-201ENST00000238146 GLI4P10075 376 aa13.54□□□□□ -0.24
DDX55-201ENST00000238146 OPRM1P35372 400 aa13.54□□□□□ -0.24
DDX55-201ENST00000238146 PP6455Q8WZ26 134 aa13.54□□□□□ -0.24
DDX55-201ENST00000238146 RARRES2Q99969 163 aa13.54□□□□□ -0.24
DDX55-201ENST00000238146 PIGLQ9Y2B2 252 aa13.54□□□□□ -0.24
DDX55-201ENST00000238146 RALGAPA1Q6GYQ0 2036 aa13.54□□□□□ -0.24
DDX55-201ENST00000238146 RSPO4Q2I0M5 234 aaPredicted RBP13.54□□□□□ -0.24
DDX55-201ENST00000238146 SOHLH1Q5JUK2 328 aa13.54□□□□□ -0.24
DDX55-201ENST00000238146 TMEM182Q6ZP80 229 aaPredicted RBP13.54□□□□□ -0.24
DDX55-201ENST00000238146 Q6ZS52 159 aa13.54□□□□□ -0.24
DDX55-201ENST00000238146 C7orf61Q8IZ16 206 aa13.54□□□□□ -0.24
DDX55-201ENST00000238146 D2HGDHQ8N465 521 aa13.54□□□□□ -0.24
DDX55-201ENST00000238146 WDSUB1Q8N9V3 476 aa13.54□□□□□ -0.24
DDX55-201ENST00000238146 NFAM1Q8NET5 270 aaPredicted RBP13.54□□□□□ -0.24
DDX55-201ENST00000238146 FAM213BQ8TBF2 198 aa13.54□□□□□ -0.24
DDX55-201ENST00000238146 OXGR1Q96P68 337 aa13.54□□□□□ -0.24
DDX55-201ENST00000238146 PIGQQ9BRB3 760 aa13.54□□□□□ -0.24
DDX55-201ENST00000238146 PAPOLGQ9BWT3 736 aaKnown RBP13.54□□□□□ -0.24
DDX55-201ENST00000238146 TOLLIPQ9H0E2 274 aa13.54□□□□□ -0.24
DDX55-201ENST00000238146 ZNF581Q9P0T4 197 aa13.54□□□□□ -0.24
DDX55-201ENST00000238146 EXPH5Q8NEV8 1989 aa13.54□□□□□ -0.24
DDX55-201ENST00000238146 A0A0U1RQV5 110 aa13.53□□□□□ -0.24
DDX55-201ENST00000238146 A0A1B0GW64 132 aa13.53□□□□□ -0.24
DDX55-201ENST00000238146 ZNF726A6NNF4 738 aa13.53□□□□□ -0.24
DDX55-201ENST00000238146 ZNF850A8MQ14 1090 aa13.53□□□□□ -0.24
DDX55-201ENST00000238146 K7N7A8 449 aa13.53□□□□□ -0.24
DDX55-201ENST00000238146 YIF1AO95070 293 aa13.53□□□□□ -0.24
DDX55-201ENST00000238146 HOXA5P20719 270 aa13.53□□□□□ -0.24
DDX55-201ENST00000238146 CHATP28329 748 aa13.53□□□□□ -0.24
DDX55-201ENST00000238146 ZNF133P52736 654 aaPredicted RBP13.53□□□□□ -0.24
DDX55-201ENST00000238146 C14orf28Q4W4Y0 310 aa13.53□□□□□ -0.24
DDX55-201ENST00000238146 ABCA11PQ4W5N1 156 aa13.53□□□□□ -0.24
DDX55-201ENST00000238146 LRTM2Q8N967 370 aa13.53□□□□□ -0.24
DDX55-201ENST00000238146 RNF138Q8WVD3 245 aa13.53□□□□□ -0.24
DDX55-201ENST00000238146 C18orf12Q96KH6 178 aa13.53□□□□□ -0.24
DDX55-201ENST00000238146 NXT1Q9UKK6 140 aaKnown RBP13.53□□□□□ -0.24
DDX55-201ENST00000238146 UNC13CQ8NB66 2214 aa13.53□□□□□ -0.24
DDX55-201ENST00000238146 NSG1A0A0A6YYJ2 146 aa13.53□□□□□ -0.24
DDX55-201ENST00000238146 GATCO43716 136 aaKnown RBP13.53□□□□□ -0.24
DDX55-201ENST00000238146 RAB2AP61019 212 aa13.53□□□□□ -0.24
DDX55-201ENST00000238146 IL13RA2Q14627 380 aa13.53□□□□□ -0.24
DDX55-201ENST00000238146 RSPO1Q2MKA7 263 aaPredicted RBP13.53□□□□□ -0.24
DDX55-201ENST00000238146 FBXW12Q6X9E4 464 aa13.53□□□□□ -0.24
DDX55-201ENST00000238146 ZNF600Q6ZNG1 722 aa13.53□□□□□ -0.24
DDX55-201ENST00000238146 LIAT1Q6ZQX7 453 aa13.53□□□□□ -0.24
DDX55-201ENST00000238146 LFNGQ8NES3 379 aa13.53□□□□□ -0.24
DDX55-201ENST00000238146 MR1Q95460 341 aa13.53□□□□□ -0.24
DDX55-201ENST00000238146 NECAP2Q9NVZ3 263 aa13.53□□□□□ -0.24
DDX55-201ENST00000238146 AK3Q9UIJ7 227 aa13.53□□□□□ -0.24
DDX55-201ENST00000238146 IFITM10A6NMD0 228 aa13.52□□□□□ -0.24
DDX55-201ENST00000238146 YKT6O15498 198 aa13.52□□□□□ -0.24
DDX55-201ENST00000238146 RPS10P46783 165 aaKnown RBP13.52□□□□□ -0.24
DDX55-201ENST00000238146 ASCL1P50553 236 aa13.52□□□□□ -0.24
DDX55-201ENST00000238146 FXYD4P59646 89 aa13.52□□□□□ -0.24
DDX55-201ENST00000238146 KIAA0141Q14154 515 aaPredicted RBP13.52□□□□□ -0.24
DDX55-201ENST00000238146 TAF9Q16594 264 aa13.52□□□□□ -0.24
DDX55-201ENST00000238146 PHLDA2Q53GA4 152 aa13.52□□□□□ -0.24
DDX55-201ENST00000238146 SUMF2Q8NBJ7 301 aa13.52□□□□□ -0.24
DDX55-201ENST00000238146 MSI2Q96DH6 328 aaKnown RBP13.52□□□□□ -0.24
DDX55-201ENST00000238146 MUCL1Q96DR8 90 aa13.52□□□□□ -0.24
DDX55-201ENST00000238146 SUCNR1Q9BXA5 334 aa13.52□□□□□ -0.24
DDX55-201ENST00000238146 DMRT1Q9Y5R6 373 aa13.52□□□□□ -0.24
DDX55-201ENST00000238146 OR5H15A6NDH6 313 aa13.52□□□□□ -0.25
DDX55-201ENST00000238146 SHISA7A6NL88 538 aa13.52□□□□□ -0.25
DDX55-201ENST00000238146 ST8SIA3O43173 380 aa13.52□□□□□ -0.25
DDX55-201ENST00000238146 RD3LP0DJH9 198 aa13.52□□□□□ -0.25
DDX55-201ENST00000238146 MSX1P28360 303 aa13.52□□□□□ -0.25
DDX55-201ENST00000238146 DUSP1P28562 367 aa13.52□□□□□ -0.25
DDX55-201ENST00000238146 SFTPDP35247 375 aa13.52□□□□□ -0.25
DDX55-201ENST00000238146 PTGDSP41222 190 aa13.52□□□□□ -0.25
DDX55-201ENST00000238146 CSNK1A1P48729 337 aa13.52□□□□□ -0.25
DDX55-201ENST00000238146 CCL20P78556 96 aa13.52□□□□□ -0.25
DDX55-201ENST00000238146 OR2B11Q5JQS5 317 aa13.52□□□□□ -0.25
DDX55-201ENST00000238146 MARS2Q96GW9 593 aaKnown RBP13.52□□□□□ -0.25
DDX55-201ENST00000238146 CHRDQ9H2X0 955 aa13.52□□□□□ -0.25
DDX55-201ENST00000238146 SLC2A9Q9NRM0 540 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms