RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Defa21Q8C1P2 93 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Slc2a10Q8VHD6 536 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Egln2Q91YE2 419 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Rnf115Q9D0C1 305 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Spata19Q9DAQ9 154 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Mmp24Q9R0S2 618 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Trav3-4A0A075B654 114 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Trav18A0A075B656 109 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Vmn1r138D3YTY2 306 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Gm8693E9PW18 306 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Gm4498K9J7G4 306 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Vmn1r118L7N273 306 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Cdk5r2O35926 369 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Wnt1P04426 370 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Klkb1P26262 638 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Slc35d2Q762D5 326 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Vmn1r83Q8R287 306 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Olfr60Q8VGL4 311 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Lamtor1Q9CQ22 161 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Rnase10Q9D5A9 208 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Ankrd50F7BE84 1390 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Ccdc71lE9Q4T4 218 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Rnase11Q5GAM9 192 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 C330021F23RikQ8C7T0 141 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Ptrh2Q8R2Y8 181 aaKnown RBP8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Myoz3Q8R4E4 245 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Olfr732Q8VFT5 308 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Gabra4Q9D6F4 552 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Trav13-4-dv7A0A075B6C2 110 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Vmn1r90A0A087WR36 309 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Trbv12-2A0A0B4J1H1 124 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Trav13d-4A0A0G2JFX3 110 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Olfr740E9PV79 311 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Raet1cO08604 253 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Tnfrsf11aO35305 625 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Gpr33O88416 339 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 CfhP06909 1234 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 H2-Q7P14429 334 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 H2-Q9P14431 200 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Acp2P24638 423 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Lefty2P57785 368 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Btg1P62325 171 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Mmp11Q02853 492 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Itpripl2Q3UV16 535 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Gm20865Q62460 227 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Taf9bQ6NZA9 249 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Olfr25Q7TRD6 313 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Osgin1Q8VC10 478 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Olfr836Q8VFJ3 317 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Olfr790Q8VGJ3 322 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 TsfmQ9CZR8 324 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Ceacam20Q9D2Z1 577 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Ovca2Q9D7E3 225 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Lilra6A0A0B4J1F3 663 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 ZxdbA2CE44 873 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Olfr221B2RVX8 311 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Gm4775F7ANJ3 135 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Fut9O88819 359 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Polr2lP62876 67 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Fkbp10Q61576 581 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Tcaf1Q8BNE1 924 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 PigtQ8BXQ2 582 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Pttg1ipQ8R143 174 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Vmn1r37Q8R2E4 302 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Fitm1Q91V79 292 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Pacsin3Q99JB8 424 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Arrdc2Q9D668 407 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Olfr19Q9JHB2 309 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Cdc42ep5Q9Z0X0 150 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Arhgap5P97393 1501 aa8.05□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Tex14Q7M6U3 1450 aa8.04□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Top2aQ01320 1528 aaKnown RBP8.04□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Olfr869E9PX82 323 aa8.04□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Fam98cE9PYD1 344 aa8.04□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Olfr640E9Q7P5 314 aa8.04□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Gm16519F8VQK7 162 aa8.04□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Mex3aG3UYU0 520 aaKnown RBP8.04□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Dnajc30P59041 219 aa8.04□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Ccdc190Q3URK1 288 aa8.04□□□□□ -1.12
Clcn3-202ENSMUST00000056508 HlxQ61670 476 aa8.04□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Olfr94Q6UAH0 386 aa8.04□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Spaca9Q7TPM5 168 aa8.04□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Gm13199Q8C8E0 125 aa8.04□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Amer2Q8CCJ4 672 aa8.04□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Olfr481Q8VGI5 312 aa8.04□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Tmem150aQ91WN2 271 aa8.04□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Golt1aQ9DCQ3 133 aa8.04□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Tcrg-V6A0A075B5Y8 134 aa8.04□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Rbm24D3Z4I3 236 aaKnown RBP8.04□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Pla2g2cP48076 150 aa8.04□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Nutf2P61971 127 aa8.04□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Olfr1209Q3SXJ3 310 aa8.04□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Q3TEI4 1023 aa8.04□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Gpr141Q7TQP0 305 aa8.04□□□□□ -1.12
Clcn3-202ENSMUST00000056508 SetmarQ80UJ9 309 aa8.04□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Rhbdf2Q80WQ6 827 aa8.04□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Gm9913Q8BQQ2 135 aa8.04□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Slco6c1Q8C0X7 706 aa8.04□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Calhm2Q8VEC4 323 aa8.04□□□□□ -1.12
Clcn3-202ENSMUST00000056508 Olfr353Q8VGK0 311 aa8.04□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 49.2 ms