RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 H2-M10.6Q85ZW5 330 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr1110Q8VG38 312 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr378Q8VGT2 314 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Mus81Q91ZJ0 551 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Trbv2A0A0B4J1G8 114 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Ccl20O89093 97 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 GzmaP11032 260 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Zfp59P16373 634 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Mlf2Q99KX1 247 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Gm4177D3YTX5 305 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Vmn1r103K7N6X7 305 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Vmn1r151L7N288 305 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr12Q60894 333 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr1509Q7TQQ0 308 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Lancl3Q8CD19 420 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Mrps18aQ99N85 196 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Rarres2Q9DD06 162 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 P2ry4Q9JJS7 361 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Pde6dO55057 150 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Prss2P07146 246 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 NrasP08556 189 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr862Q8VFJ1 306 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr1048Q8VGS2 320 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Cryzl1Q921W4 348 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Mrpl13Q9D1P0 178 aaKnown RBP15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Ceacam16E9QA28 426 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Vmn1r60G3UY47 300 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Emg1O35130 244 aaKnown RBP15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 AldocP05063 363 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 ArsbP50429 534 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Dcaf12Q8BGZ3 453 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Uqcc3Q8K2T4 89 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr639Q8VGY8 316 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Il23aQ9EQ14 196 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Fgf22Q9ESS2 162 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Chst11Q9JME2 352 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Fbxw28E9Q8A4 466 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Crisp2P16563 243 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 AI987944Q7TPX5 406 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Erlec1Q8VEH8 483 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Dpep3Q9DA79 493 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Vmn1r180B9EK86 305 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Rdh16f1E9Q9P8 317 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Zfp947Q8BIQ6 437 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 BlvrbQ923D2 206 aaKnown RBP15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Ppp6cQ9CQR6 305 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Arpc3Q9JM76 178 aaKnown RBP15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Gfra2O08842 464 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 FasP25446 327 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Ube2iP63280 158 aaKnown RBP15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Eddm3bQ8K0E4 149 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Vmn1r17Q8R2D8 303 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr448Q8VES9 310 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr1427Q8VFU9 311 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr1233Q8VGN0 305 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Egr3P43300 387 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Zfp7Q3TFZ4 685 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr198Q7TS40 306 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr266Q8VFC3 316 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Cd302Q9DCG2 228 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 LmlnQ8BMN4 681 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 CmblQ8R1G2 245 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Ly6iQ9WU67 134 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Zfp979A2A799 407 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 FiglaO55208 194 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Fndc4Q3TR08 231 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Cyb561Q60720 250 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Sec24bQ80ZX0 1251 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Epdr1Q99M71 224 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 TpbgQ9Z0L0 426 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Ighv15-2A0A0A6YX72 118 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Mptx2D3YYJ7 219 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Gm3512L7N206 146 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Scand1Q2M4I6 142 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Sft2d1Q5SSN7 159 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Yipf6Q8BR70 236 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Fam120cQ8C3F2 1091 aaKnown RBP15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr788Q8VFI0 311 aa15.12■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 NumblO08919 604 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Map2k6P70236 334 aaKnown RBP15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Foxj1Q61660 421 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr452Q7TRV8 317 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Pex13Q9D0K1 405 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Fndc10A2A9Q0 223 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Sult2a1P52843 285 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Obox7Q4KL20 218 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Cggbp1Q8BHG9 167 aaKnown RBP15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Arrb2Q91YI4 410 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Col6a6Q8C6K9 2265 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Slco5a1E9PVD9 850 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Thbs4Q9Z1T2 963 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Zfp930A0A1D5RM15 441 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr282A1L1B4 308 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Gm15737D3YZR0 106 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 4930467E23RikD3Z1P8 350 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Gm15319E9Q637 350 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Vmn1r67G5E8C1 305 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Cd79bP15530 228 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Evx2P49749 475 aa15.11■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Hist1h3aP68433 136 aa15.11■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 38.7 ms