RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Olfr583Q8VG25 319 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 GrinaQ9ESF4 345 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Pik3c2aQ61194 1686 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Zfp109A0A0U1RPC5 652 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Mptx2D3YYJ7 219 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Olfr872E9PVW2 323 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 4930522L14RikE9QAG4 666 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Gcm2O09102 504 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 P01735 133 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 PigvQ7TPN3 493 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Agfg2Q80WC7 479 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Q8C3M9 231 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 4922502D21RikQ8C634 189 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Crlf2Q8CII9 359 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Cmtm4Q8CJ61 208 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Klre1Q8CJC7 226 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Olfr1086Q8VFL9 310 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Nudt16l1Q8VHN8 211 aaKnown RBP8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Rab40cQ8VHQ4 281 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Dus3lQ91XI1 637 aaKnown RBP8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Tex33Q9D9J2 266 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 SrfQ9JM73 504 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Sema7aQ9QUR8 664 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 CnmdQ9Z1F6 334 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Phlpp1Q8CHE4 1687 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Gm13285B1AYI3 182 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Gm13275B1AYI8 182 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Scgb1b29D2XZ31 93 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Scgb1b20E9PWZ2 93 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Gm21721J3QMK7 227 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Gm21788J3QNH3 180 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 CtslP06797 334 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Csf3P09920 208 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 H2-T3P14432 384 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 CapgP24452 352 aaKnown RBP8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Pax6P63015 422 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Gbx1P82976 418 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Sft2d1Q5SSN7 159 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 ShhQ62226 437 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Znf728Q6P5C7 752 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 RimklaQ6PFX8 380 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 ItpkcQ7TS72 678 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Slc25a40Q8BGP6 337 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 IfnzQ8BQT1 182 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Gm13278Q8CD73 182 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Flywch1Q8CI03 673 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Olfr980Q8VH08 310 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Rfpl4aQ8VH31 287 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 B3galnt1Q920V1 331 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Atp5sQ9CRA7 200 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 TsfmQ9CZR8 324 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 4933407L21RikQ9D476 131 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Q9D7E4 109 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Pdcd1lg2Q9WUL5 247 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Ccdc88cQ6VGS5 2009 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Gm13283A0A087WPG5 182 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Ube2dnl1A2AFH1 155 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 St8sia2O35696 375 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Zfp1P08042 402 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Lgals1P16045 135 aaKnown RBP8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Ube2iP63280 158 aaKnown RBP8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 SryQ05738 395 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Myadml2Q08AU7 307 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Fam72aQ8BFZ8 149 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Epdr1Q99M71 224 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Sval1Q9D2X6 151 aa8.33□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Espl1P60330 2118 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Fnd3c2A2AP83 941 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Tgfbr3lD3YZZ2 297 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Olfr571E9Q407 322 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Gm3486L7N2D0 199 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 FasP25446 327 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Foxk1P42128 719 aaKnown RBP8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 ArsbP50429 534 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Limk1P53668 647 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Ppp1caP62137 330 aaKnown RBP8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Klf4Q60793 483 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Krba1Q6NXZ1 1043 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 H2-M10.6Q85ZW5 330 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 TMEM229BQ8BFQ2 167 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Ip6k3Q8BWD2 396 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 FevQ8QZW2 237 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Spns1Q8R0G7 528 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Olfr1512Q8VF72 313 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Olfr1457Q8VFK3 317 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Olfr1451Q8VFX5 310 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 St3gal6Q8VIB3 329 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Mrgpra4Q91WW2 313 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Dusp22Q99N11 184 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Atp6v1fQ9D1K2 119 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Prss23Q9D6X6 382 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Foxe3Q9QY14 288 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Ak3Q9WTP7 227 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Cyp2d37-psF6YKB5 150 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Rdh19G5E8H9 318 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Vmn1r57K7N731 310 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Cd200O54901 278 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Tgfb1P04202 390 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 SrgnP13609 152 aa8.32□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Fxyd2Q04646 70 aa8.32□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms