RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 KCNJ8Q15842 424 aa18.09■□□□□ 0.49
SCN1B-206ENST00000638536 C6orf141Q5SZD1 244 aa18.09■□□□□ 0.49
SCN1B-206ENST00000638536 OR13C3Q8NGS6 347 aa18.09■□□□□ 0.49
SCN1B-206ENST00000638536 OR5AK2Q8NH90 309 aa18.09■□□□□ 0.49
SCN1B-206ENST00000638536 RPS4Y2Q8TD47 263 aa18.09■□□□□ 0.49
SCN1B-206ENST00000638536 COL6A5A8TX70 2615 aa18.09■□□□□ 0.49
SCN1B-206ENST00000638536 DVL1O14640 695 aa18.09■□□□□ 0.49
SCN1B-206ENST00000638536 NDUFA2O43678 99 aa18.09■□□□□ 0.49
SCN1B-206ENST00000638536 MYL12AP19105 171 aa18.09■□□□□ 0.49
SCN1B-206ENST00000638536 PCMT1P22061 227 aa18.09■□□□□ 0.49
SCN1B-206ENST00000638536 CDK5R1Q15078 307 aa18.09■□□□□ 0.49
SCN1B-206ENST00000638536 TMPRSS11AQ6ZMR5 421 aa18.09■□□□□ 0.49
SCN1B-206ENST00000638536 ZNF573Q86YE8 665 aa18.09■□□□□ 0.49
SCN1B-206ENST00000638536 ZFP41Q8N8Y5 198 aa18.09■□□□□ 0.49
SCN1B-206ENST00000638536 ZNF671Q8TAW3 534 aa18.09■□□□□ 0.49
SCN1B-206ENST00000638536 C10orf35Q96D05 121 aa18.09■□□□□ 0.49
SCN1B-206ENST00000638536 TECTBQ96PL2 329 aa18.09■□□□□ 0.49
SCN1B-206ENST00000638536 TRIM36Q9NQ86 728 aa18.09■□□□□ 0.49
SCN1B-206ENST00000638536 PAK1IP1Q9NWT1 392 aaPredicted RBP18.09■□□□□ 0.49
SCN1B-206ENST00000638536 BABAM2Q9NXR7 383 aa18.09■□□□□ 0.49
SCN1B-206ENST00000638536 KAAG1Q9UBP8 84 aa18.09■□□□□ 0.49
SCN1B-206ENST00000638536 DNAJB11Q9UBS4 358 aa18.09■□□□□ 0.49
SCN1B-206ENST00000638536 OR5V1Q9UGF6 321 aa18.09■□□□□ 0.49
SCN1B-206ENST00000638536 TMEM212A6NML5 194 aa18.08■□□□□ 0.48
SCN1B-206ENST00000638536 J3QT63 122 aa18.08■□□□□ 0.48
SCN1B-206ENST00000638536 INMTO95050 263 aa18.08■□□□□ 0.48
SCN1B-206ENST00000638536 PGA5P0DJD9 388 aa18.08■□□□□ 0.48
SCN1B-206ENST00000638536 MYF6P23409 242 aa18.08■□□□□ 0.48
SCN1B-206ENST00000638536 CPT2P23786 658 aa18.08■□□□□ 0.48
SCN1B-206ENST00000638536 SRP14P37108 136 aaKnown RBP18.08■□□□□ 0.48
SCN1B-206ENST00000638536 MRPL28Q13084 256 aaKnown RBP18.08■□□□□ 0.48
SCN1B-206ENST00000638536 ANGPTL6Q8NI99 470 aa18.08■□□□□ 0.48
SCN1B-206ENST00000638536 RAB40AQ8WXH6 277 aa18.08■□□□□ 0.48
SCN1B-206ENST00000638536 PP6455Q8WZ26 134 aa18.08■□□□□ 0.48
SCN1B-206ENST00000638536 NLKQ9UBE8 527 aa18.08■□□□□ 0.48
SCN1B-206ENST00000638536 SLC7A11Q9UPY5 501 aa18.08■□□□□ 0.48
SCN1B-206ENST00000638536 IGKV1D-17A0A075B6S4 117 aa18.07■□□□□ 0.48
SCN1B-206ENST00000638536 IGHV2-70DA0A0C4DH43 119 aa18.07■□□□□ 0.48
SCN1B-206ENST00000638536 F8VVB4 439 aa18.07■□□□□ 0.48
SCN1B-206ENST00000638536 F8VWA3 439 aa18.07■□□□□ 0.48
SCN1B-206ENST00000638536 SLC1A7O00341 560 aa18.07■□□□□ 0.48
SCN1B-206ENST00000638536 GATBO75879 557 aaKnown RBP18.07■□□□□ 0.48
SCN1B-206ENST00000638536 PLATP00750 562 aa18.07■□□□□ 0.48
SCN1B-206ENST00000638536 ZNF20P17024 532 aa18.07■□□□□ 0.48
SCN1B-206ENST00000638536 GATA3P23771 443 aa18.07■□□□□ 0.48
SCN1B-206ENST00000638536 MPZP25189 248 aa18.07■□□□□ 0.48
SCN1B-206ENST00000638536 FUT6P51993 359 aa18.07■□□□□ 0.48
SCN1B-206ENST00000638536 ATPAF1Q5TC12 328 aaPredicted RBP18.07■□□□□ 0.48
SCN1B-206ENST00000638536 ASPHD2Q6ICH7 369 aa18.07■□□□□ 0.48
SCN1B-206ENST00000638536 RPL22L1Q6P5R6 122 aaKnown RBP18.07■□□□□ 0.48
SCN1B-206ENST00000638536 CRIP3Q6Q6R5 217 aa18.07■□□□□ 0.48
SCN1B-206ENST00000638536 UTS2BQ765I0 119 aa18.07■□□□□ 0.48
SCN1B-206ENST00000638536 POC1AQ8NBT0 407 aa18.07■□□□□ 0.48
SCN1B-206ENST00000638536 OR52N1Q8NH53 320 aa18.07■□□□□ 0.48
SCN1B-206ENST00000638536 C12orf43Q96C57 262 aaKnown RBP18.07■□□□□ 0.48
SCN1B-206ENST00000638536 GAFA1Q96PS6 74 aa18.07■□□□□ 0.48
SCN1B-206ENST00000638536 ANKRD60Q9BZ19 345 aa18.07■□□□□ 0.48
SCN1B-206ENST00000638536 OR2AT4A6NND4 320 aa18.06■□□□□ 0.48
SCN1B-206ENST00000638536 PTGES3LE9PB15 166 aa18.06■□□□□ 0.48
SCN1B-206ENST00000638536 J3QLI3 93 aa18.06■□□□□ 0.48
SCN1B-206ENST00000638536 OGG1O15527 345 aa18.06■□□□□ 0.48
SCN1B-206ENST00000638536 SERPINA3P01011 423 aa18.06■□□□□ 0.48
SCN1B-206ENST00000638536 CCDC159P0C7I6 412 aa18.06■□□□□ 0.48
SCN1B-206ENST00000638536 PSG2P11465 335 aa18.06■□□□□ 0.48
SCN1B-206ENST00000638536 ATF1P18846 271 aa18.06■□□□□ 0.48
SCN1B-206ENST00000638536 SRSF2Q01130 221 aaKnown RBP18.06■□□□□ 0.48
SCN1B-206ENST00000638536 PAX8Q06710 450 aa18.06■□□□□ 0.48
SCN1B-206ENST00000638536 ACP7Q6ZNF0 438 aa18.06■□□□□ 0.48
SCN1B-206ENST00000638536 STX19Q8N4C7 294 aa18.06■□□□□ 0.48
SCN1B-206ENST00000638536 OR13C5Q8NGS8 318 aa18.06■□□□□ 0.48
SCN1B-206ENST00000638536 OR13C9Q8NGT0 318 aa18.06■□□□□ 0.48
SCN1B-206ENST00000638536 TMIGD2Q96BF3 282 aa18.06■□□□□ 0.48
SCN1B-206ENST00000638536 SPACA5Q96QH8 159 aa18.06■□□□□ 0.48
SCN1B-206ENST00000638536 COMMD4Q9H0A8 199 aa18.06■□□□□ 0.48
SCN1B-206ENST00000638536 MTCH1Q9NZJ7 389 aa18.06■□□□□ 0.48
SCN1B-206ENST00000638536 AZGP1P25311 298 aaKnown RBP18.05■□□□□ 0.48
SCN1B-206ENST00000638536 IKZF1Q13422 519 aa18.05■□□□□ 0.48
SCN1B-206ENST00000638536 CCDC58Q4VC31 144 aa18.05■□□□□ 0.48
SCN1B-206ENST00000638536 ZNF788Q6ZQV5 615 aa18.05■□□□□ 0.48
SCN1B-206ENST00000638536 BORCS8Q96FH0 119 aa18.05■□□□□ 0.48
SCN1B-206ENST00000638536 NRIP2Q9BQI9 281 aa18.05■□□□□ 0.48
SCN1B-206ENST00000638536 NUDT16L1Q9BRJ7 211 aaKnown RBP18.05■□□□□ 0.48
SCN1B-206ENST00000638536 VCX3BQ9H321 246 aa18.05■□□□□ 0.48
SCN1B-206ENST00000638536 CHCHD3Q9NX63 227 aaKnown RBP18.05■□□□□ 0.48
SCN1B-206ENST00000638536 ZNF222Q9UK12 451 aa18.05■□□□□ 0.48
SCN1B-206ENST00000638536 KIR2DS1A0A191URI9 304 aa18.05■□□□□ 0.48
SCN1B-206ENST00000638536 NOS1APO75052 506 aaPredicted RBP18.05■□□□□ 0.48
SCN1B-206ENST00000638536 SOX2P48431 317 aa18.05■□□□□ 0.48
SCN1B-206ENST00000638536 CEBPDP49716 269 aaPredicted RBP18.05■□□□□ 0.48
SCN1B-206ENST00000638536 NPY4RP50391 375 aa18.05■□□□□ 0.48
SCN1B-206ENST00000638536 ERVK11-1P61568 191 aa18.05■□□□□ 0.48
SCN1B-206ENST00000638536 CNN3Q15417 329 aaKnown RBP18.05■□□□□ 0.48
SCN1B-206ENST00000638536 DGUOKQ16854 277 aa18.05■□□□□ 0.48
SCN1B-206ENST00000638536 ST8SIA4Q92187 359 aa18.05■□□□□ 0.48
SCN1B-206ENST00000638536 RFT1Q96AA3 541 aa18.05■□□□□ 0.48
SCN1B-206ENST00000638536 METRNQ9UJH8 293 aa18.05■□□□□ 0.48
SCN1B-206ENST00000638536 MAB21L2Q9Y586 359 aa18.05■□□□□ 0.48
SCN1B-206ENST00000638536 AUP1Q9Y679 476 aa18.05■□□□□ 0.48
SCN1B-206ENST00000638536 PNMA8CA0A1B0GUJ8 204 aa18.04■□□□□ 0.48
SCN1B-206ENST00000638536 FSHBP01225 129 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms