RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 AMTP48728 403 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 GPM6AP51674 278 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 FAM219BQ5XKK7 198 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 RNASEKQ6P5S7 137 aaKnown RBP7.98□□□□□ -1.13
VCL-206ENST00000623461 MRGPRGQ86SM5 289 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 ZNF573Q86YE8 665 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 TREM2Q9NZC2 230 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 KCNE3Q9Y6H6 103 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 TTC3P53804 2025 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 A0A1B0GTQ1 180 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 LOC102723971A0A1B0GUV8 181 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 SIAH2O43255 324 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 ADAM20O43506 726 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 CDC14BO60729 498 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 RPS27P42677 84 aaKnown RBP7.98□□□□□ -1.13
VCL-206ENST00000623461 TNFRSF4P43489 277 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 RAC1P63000 192 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 SLC38A11Q08AI6 406 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 COL9A2Q14055 689 aaPredicted RBP7.98□□□□□ -1.13
VCL-206ENST00000623461 OR4D9Q8NGE8 314 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 FAM173AQ9BQD7 235 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 GSN-AS1Q9NRJ2 163 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 HCFC1R1Q9NWW0 138 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 FFAR1O14842 300 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 ADAM11O75078 769 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 ACY3Q96HD9 319 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 VN1R1Q9GZP7 353 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 A6NDN8 102 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 TIMP1P01033 207 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 STAG3L2P0CL84 134 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 B4GALNT1Q00973 533 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 LTC4SQ16873 150 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 SP6Q3SY56 376 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.98□□□□□ -1.133e-7■■■■□ 23.7
VCL-206ENST00000623461 ADAT1Q9BUB4 502 aaKnown RBP7.98□□□□□ -1.13
VCL-206ENST00000623461 NAGKQ9UJ70 344 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 FUT3P21217 361 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 LDLRAD1Q5T700 205 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 SPOCK3Q9BQ16 436 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 GGACTQ9BVM4 153 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 FUT9Q9Y231 359 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 DBX1A6NMT0 343 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 OTX2P32243 289 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 CHRNA7P36544 502 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 EMC6Q9BV81 110 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 C20orf141Q9NUB4 165 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 XIRP1Q702N8 1843 aaKnown RBP7.97□□□□□ -1.13
VCL-206ENST00000623461 ABLIM3O94929 683 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 CYC1P08574 325 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 CSN1S1P47710 185 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 TIAL1Q01085 375 aaKnown RBP eCLIP7.97□□□□□ -1.13
VCL-206ENST00000623461 OIT3Q8WWZ8 545 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 TBX15Q96SF7 602 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 FRG2CA6NGY1 282 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 AQP7P3A6NL99 342 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 A8MXK9 166 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 CYB5R3P00387 301 aaPredicted RBP7.97□□□□□ -1.13
VCL-206ENST00000623461 SRP14P37108 136 aaKnown RBP7.97□□□□□ -1.13
VCL-206ENST00000623461 DYNLT3P51808 116 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 TMEM267Q0VDI3 215 aaPredicted RBP7.97□□□□□ -1.13
VCL-206ENST00000623461 CD200R1LQ6Q8B3 271 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 ATG101Q9BSB4 218 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 RCC2Q9P258 522 aaKnown RBP7.97□□□□□ -1.13
VCL-206ENST00000623461 PISDQ9UG56 409 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 ING1Q9UK53 422 aaPredicted RBP7.97□□□□□ -1.13
VCL-206ENST00000623461 A0A1B0GV90 55 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 WDR1O75083 606 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 SNCGO76070 127 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 GUSBP08236 651 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 SUMO3P55854 103 aaPredicted RBP7.97□□□□□ -1.13
VCL-206ENST00000623461 OR8G1Q15617 311 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 FBXO46Q6PJ61 603 aaPredicted RBP7.97□□□□□ -1.13
VCL-206ENST00000623461 SLC35E3Q7Z769 313 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 FAM117AQ9C073 453 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 PRF1P14222 555 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 HLA-BQ31612 363 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 NUFIP2Q7Z417 695 aaKnown RBP7.97□□□□□ -1.13
VCL-206ENST00000623461 OR11L1Q8NGX0 322 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 PTX4Q96A99 478 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 DDA1Q9BW61 102 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 MARCH5Q9NX47 278 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 SCN8AQ9UQD0 1980 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 QSER1Q2KHR3 1735 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 SERTM2A0A1B0GWG4 89 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 SEMA7AO75326 666 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 VSIG10L2P0DP72 767 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 GNG4P50150 75 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 SSR4P51571 173 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 SPCS3P61009 180 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 OR11H4Q8NGC9 324 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 IFI44Q8TCB0 444 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 RHOVQ96L33 236 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 MMP25Q9NPA2 562 aa7.97□□□□□ -1.13
VCL-206ENST00000623461 F12P00748 615 aaPredicted RBP7.96□□□□□ -1.13
VCL-206ENST00000623461 ARG2P78540 354 aa7.96□□□□□ -1.13
VCL-206ENST00000623461 SHISA6Q6ZSJ9 500 aa7.96□□□□□ -1.13
VCL-206ENST00000623461 OR10G8Q8NGN5 311 aa7.96□□□□□ -1.13
VCL-206ENST00000623461 CNTD2Q9H8S5 307 aa7.96□□□□□ -1.13
VCL-206ENST00000623461 ARID2Q68CP9 1835 aa7.96□□□□□ -1.13
VCL-206ENST00000623461 DEDDO75618 318 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms