RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 C19orf18Q8NEA5 215 aa11.94□□□□□ -0.5
CTSA-219ENST00000607841 OR51F2Q8NH61 342 aa11.94□□□□□ -0.5
CTSA-219ENST00000607841 TMIGD2Q96BF3 282 aa11.94□□□□□ -0.5
CTSA-219ENST00000607841 MSI2Q96DH6 328 aaKnown RBP11.94□□□□□ -0.5
CTSA-219ENST00000607841 NEIL1Q96FI4 390 aaPredicted RBP11.94□□□□□ -0.5
CTSA-219ENST00000607841 MGLLQ99685 303 aa11.94□□□□□ -0.5
CTSA-219ENST00000607841 GSX1Q9H4S2 264 aaPredicted RBP11.94□□□□□ -0.5
CTSA-219ENST00000607841 ACOT13Q9NPJ3 140 aa11.94□□□□□ -0.5
CTSA-219ENST00000607841 ZNF879B4DU55 563 aa11.93□□□□□ -0.5
CTSA-219ENST00000607841 FAM157AC9JC47 383 aa11.93□□□□□ -0.5
CTSA-219ENST00000607841 NOS1APO75052 506 aaPredicted RBP11.93□□□□□ -0.5
CTSA-219ENST00000607841 FOXH1O75593 365 aa11.93□□□□□ -0.5
CTSA-219ENST00000607841 MSMBP08118 114 aa11.93□□□□□ -0.5
CTSA-219ENST00000607841 WNT2P09544 360 aa11.93□□□□□ -0.5
CTSA-219ENST00000607841 EGR1P18146 543 aa11.93□□□□□ -0.5
CTSA-219ENST00000607841 PSMA1P25786 263 aaKnown RBP11.93□□□□□ -0.5
CTSA-219ENST00000607841 RPS11P62280 158 aaKnown RBP eCLIP11.93□□□□□ -0.5
CTSA-219ENST00000607841 EMX1Q04741 257 aaPredicted RBP11.93□□□□□ -0.5
CTSA-219ENST00000607841 TPBGQ13641 420 aa11.93□□□□□ -0.5
CTSA-219ENST00000607841 TRAM1Q15629 374 aa11.93□□□□□ -0.5
CTSA-219ENST00000607841 KCTD21Q4G0X4 260 aa11.93□□□□□ -0.5
CTSA-219ENST00000607841 ESCO2Q56NI9 601 aa11.93□□□□□ -0.5
CTSA-219ENST00000607841 LIPKQ5VXJ0 399 aa11.93□□□□□ -0.5
CTSA-219ENST00000607841 FAM166AQ6J272 317 aa11.93□□□□□ -0.5
CTSA-219ENST00000607841 CALHM1Q8IU99 346 aa11.93□□□□□ -0.5
CTSA-219ENST00000607841 MKXQ8IYA7 352 aa11.93□□□□□ -0.5
CTSA-219ENST00000607841 SPARTQ8N0X7 666 aa11.93□□□□□ -0.5
CTSA-219ENST00000607841 OR8B3Q8NGG8 313 aa11.93□□□□□ -0.5
CTSA-219ENST00000607841 OR13C5Q8NGS8 318 aa11.93□□□□□ -0.5
CTSA-219ENST00000607841 FCGR1BQ92637 280 aa11.93□□□□□ -0.5
CTSA-219ENST00000607841 OR8B2Q96RD0 313 aa11.93□□□□□ -0.5
CTSA-219ENST00000607841 TMEM138Q9NPI0 162 aa11.93□□□□□ -0.5
CTSA-219ENST00000607841 TAS2R4Q9NYW5 299 aa11.93□□□□□ -0.5
CTSA-219ENST00000607841 LRCH1Q9Y2L9 728 aa11.93□□□□□ -0.5
CTSA-219ENST00000607841 DYSFO75923 2080 aa11.93□□□□□ -0.5
CTSA-219ENST00000607841 IGKV1-27A0A075B6S5 117 aa11.92□□□□□ -0.5
CTSA-219ENST00000607841 F5H0A9 414 aaPredicted RBP11.92□□□□□ -0.5
CTSA-219ENST00000607841 SYNGR1O43759 233 aa11.92□□□□□ -0.5
CTSA-219ENST00000607841 GYPAP02724 150 aa11.92□□□□□ -0.5
CTSA-219ENST00000607841 ALDOBP05062 364 aa11.92□□□□□ -0.5
CTSA-219ENST00000607841 PGA5P0DJD9 388 aa11.92□□□□□ -0.5
CTSA-219ENST00000607841 CPEP16870 476 aa11.92□□□□□ -0.5
CTSA-219ENST00000607841 ZNF16P17020 682 aaPredicted RBP11.92□□□□□ -0.5
CTSA-219ENST00000607841 PCMT1P22061 227 aa11.92□□□□□ -0.5
CTSA-219ENST00000607841 NPY4RP50391 375 aa11.92□□□□□ -0.5
CTSA-219ENST00000607841 GMFBP60983 142 aa11.92□□□□□ -0.5
CTSA-219ENST00000607841 KRTAP1-1Q07627 177 aa11.92□□□□□ -0.5
CTSA-219ENST00000607841 DOC2BQ14184 412 aa11.92□□□□□ -0.5
CTSA-219ENST00000607841 SMIM21Q3B7S5 101 aa11.92□□□□□ -0.5
CTSA-219ENST00000607841 ZNF529Q6P280 563 aa11.92□□□□□ -0.5
CTSA-219ENST00000607841 ZNF773Q6PK81 442 aa11.92□□□□□ -0.5
CTSA-219ENST00000607841 SLC25A26Q70HW3 274 aa11.92□□□□□ -0.5
CTSA-219ENST00000607841 SLC36A1Q7Z2H8 476 aa11.92□□□□□ -0.5
CTSA-219ENST00000607841 GLCCI1Q86VQ1 547 aa11.92□□□□□ -0.5
CTSA-219ENST00000607841 FAM90A1Q86YD7 464 aa11.92□□□□□ -0.5
CTSA-219ENST00000607841 Q8IYB0 196 aa11.92□□□□□ -0.5
CTSA-219ENST00000607841 OR14A2Q96R54 314 aa11.92□□□□□ -0.5
CTSA-219ENST00000607841 NRIP2Q9BQI9 281 aa11.92□□□□□ -0.5
CTSA-219ENST00000607841 TMED9Q9BVK6 235 aa11.92□□□□□ -0.5
CTSA-219ENST00000607841 DNTTIP1Q9H147 329 aa11.92□□□□□ -0.5
CTSA-219ENST00000607841 YAE1D1Q9NRH1 226 aa11.92□□□□□ -0.5
CTSA-219ENST00000607841 NLKQ9UBE8 527 aa11.92□□□□□ -0.5
CTSA-219ENST00000607841 KCNS2Q9ULS6 477 aa11.92□□□□□ -0.5
CTSA-219ENST00000607841 MED13LQ71F56 2210 aa11.92□□□□□ -0.5
CTSA-219ENST00000607841 TANC2Q9HCD6 1990 aa11.92□□□□□ -0.5
CTSA-219ENST00000607841 CHD3Q12873 2000 aaKnown RBP11.91□□□□□ -0.5
CTSA-219ENST00000607841 IGHV3OR15-7A0A075B7D8 119 aa11.91□□□□□ -0.5
CTSA-219ENST00000607841 TRBV5-7A0A0A0MS05 114 aa11.91□□□□□ -0.5
CTSA-219ENST00000607841 TRAV20A0A0B4J274 112 aa11.91□□□□□ -0.5
CTSA-219ENST00000607841 A8MV72 311 aaPredicted RBP11.91□□□□□ -0.5
CTSA-219ENST00000607841 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.91□□□□□ -0.5
CTSA-219ENST00000607841 TMPRSS2O15393 492 aa11.91□□□□□ -0.5
CTSA-219ENST00000607841 ADAM20O43506 726 aa11.91□□□□□ -0.5
CTSA-219ENST00000607841 GPX5O75715 221 aa11.91□□□□□ -0.5
CTSA-219ENST00000607841 NXPH2O95156 264 aa11.91□□□□□ -0.5
CTSA-219ENST00000607841 TNFAIP8O95379 198 aa11.91□□□□□ -0.5
CTSA-219ENST00000607841 PLATP00750 562 aa11.91□□□□□ -0.5
CTSA-219ENST00000607841 BDKRB2P30411 391 aa11.91□□□□□ -0.5
CTSA-219ENST00000607841 TGFBR2P37173 567 aa11.91□□□□□ -0.5
CTSA-219ENST00000607841 POU3F4P49335 361 aa11.91□□□□□ -0.5
CTSA-219ENST00000607841 DVL1P1P54792 670 aaPredicted RBP11.91□□□□□ -0.5
CTSA-219ENST00000607841 GNB2P62879 340 aa11.91□□□□□ -0.5
CTSA-219ENST00000607841 HOXA4Q00056 320 aaPredicted RBP11.91□□□□□ -0.5
CTSA-219ENST00000607841 PDZK1IP1Q13113 114 aa11.91□□□□□ -0.5
CTSA-219ENST00000607841 KISS1Q15726 138 aa11.91□□□□□ -0.5
CTSA-219ENST00000607841 ACSM3Q53FZ2 586 aa11.91□□□□□ -0.5
CTSA-219ENST00000607841 TMEM186Q96B77 213 aa11.91□□□□□ -0.5
CTSA-219ENST00000607841 CEP19Q96LK0 163 aa11.91□□□□□ -0.5
CTSA-219ENST00000607841 DERL3Q96Q80 235 aa11.91□□□□□ -0.5
CTSA-219ENST00000607841 GPER1Q99527 375 aa11.91□□□□□ -0.5
CTSA-219ENST00000607841 SSBP3Q9BWW4 388 aaPredicted RBP11.91□□□□□ -0.5
CTSA-219ENST00000607841 WDR13Q9H1Z4 485 aa11.91□□□□□ -0.5
CTSA-219ENST00000607841 LPAR2Q9HBW0 351 aa11.91□□□□□ -0.5
CTSA-219ENST00000607841 KAAG1Q9UBP8 84 aa11.91□□□□□ -0.5
CTSA-219ENST00000607841 CLN8Q9UBY8 286 aa11.91□□□□□ -0.5
CTSA-219ENST00000607841 FOXJ3Q9UPW0 622 aa11.91□□□□□ -0.5
CTSA-219ENST00000607841 FLNAP21333 2647 aaKnown RBP11.91□□□□□ -0.5
CTSA-219ENST00000607841 A0A1W2PPK0 400 aa11.9□□□□□ -0.5
CTSA-219ENST00000607841 NKX6-3A6NJ46 265 aa11.9□□□□□ -0.5
CTSA-219ENST00000607841 OR2AT4A6NND4 320 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms