RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 CRYGBP07316 175 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 SLC35E2P0CK97 266 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 PGA4P0DJD7 388 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 PGA5P0DJD9 388 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 PRDX3P30048 256 aaKnown RBP4.16□□□□□ -1.74
LINC01109-201ENST00000603837 OR10J1P30954 320 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 RPL4P36578 427 aaKnown RBP4.16□□□□□ -1.74
LINC01109-201ENST00000603837 SLC6A11P48066 632 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 GABRA4P48169 554 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 DUSP3P51452 185 aaPredicted RBP4.16□□□□□ -1.74
LINC01109-201ENST00000603837 UCNP55089 124 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 RPS20P60866 119 aaKnown RBP4.16□□□□□ -1.74
LINC01109-201ENST00000603837 CKS1BP61024 79 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 RPL38P63173 70 aaKnown RBP4.16□□□□□ -1.74
LINC01109-201ENST00000603837 SRSF6Q13247 344 aaKnown RBP4.16□□□□□ -1.74
LINC01109-201ENST00000603837 FOXE3Q13461 319 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 CSRP2Q16527 193 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 CCSMST1Q4G0I0 132 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 TMEM196Q5HYL7 178 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 HECTD2Q5U5R9 776 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 SMARCD3Q6STE5 483 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 CBLN3Q6UW01 205 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 BTNL8Q6UX41 500 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 Q6ZSR9 355 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 MDGA2Q7Z553 956 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 SPRED2Q7Z698 418 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 MUC15Q8N387 334 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 OR51G2Q8NGK0 314 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 TMEM18Q96B42 140 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 RAB39BQ96DA2 213 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 ZBTB45Q96K62 511 aaPredicted RBP4.16□□□□□ -1.74
LINC01109-201ENST00000603837 OR5B12Q96R08 314 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 OR6C1Q96RD1 312 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 LPAR4Q99677 370 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 GPR21Q99679 349 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 C20orf144Q9BQM9 153 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 KCNJ16Q9NPI9 418 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 TRIM36Q9NQ86 728 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 FKBP11Q9NYL4 201 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 RHCGQ9UBD6 479 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 PILRBQ9UKJ0 227 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 SLC45A2Q9UMX9 530 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 SCML2Q9UQR0 700 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 ST3GAL6Q9Y274 331 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 PIGLQ9Y2B2 252 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 COX11Q9Y6N1 276 aa4.16□□□□□ -1.74
LINC01109-201ENST00000603837 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 FEZF1A0PJY2 475 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 ZNF727A8MUV8 499 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 GABARAPH6UMI1 98 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 MMP23AO75900 390 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 SOX14O95416 240 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 AMY1AP04745 511 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 ATP1B1P05026 303 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 CD3EP07766 207 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 AKR1C4P17516 323 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 CCKARP32238 428 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 LGALS7P47929 136 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 CYB561P49447 251 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 SSBP2P81877 361 aaPredicted RBP4.15□□□□□ -1.74
LINC01109-201ENST00000603837 ZNF763Q0D2J5 394 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 ABRAXAS2Q15018 415 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 DUSP5Q16690 384 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 PRTGQ2VWP7 1150 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 SLC25A35Q3KQZ1 300 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 TPTE2P1Q5T6R2 138 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 AADACL3Q5VUY0 350 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 TMEM268Q5VZI3 342 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 STEAP1BQ6NZ63 245 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 ZNF585AQ6P3V2 769 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 C22orf34Q6ZV56 151 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 C17orf64Q86WR6 236 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 GPSM1Q86YR5 675 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 STPG4Q8N801 248 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 ARL14EPQ8N8R7 260 aaPredicted RBP4.15□□□□□ -1.74
LINC01109-201ENST00000603837 FCAMRQ8WWV6 532 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 PPDPFQ9H3Y8 114 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 RETNQ9HD89 108 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 FGF20Q9NP95 211 aaPredicted RBP4.15□□□□□ -1.74
LINC01109-201ENST00000603837 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.15□□□□□ -1.74
LINC01109-201ENST00000603837 CISHQ9NSE2 258 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 ANKRD10Q9NXR5 420 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 TESQ9UGI8 421 aaKnown RBP4.15□□□□□ -1.74
LINC01109-201ENST00000603837 STEAP1Q9UHE8 339 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 VAX2Q9UIW0 290 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 B9D1Q9UPM9 204 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 PPIAL4AQ9Y536 164 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 COL4A4P53420 1690 aaPredicted RBP4.15□□□□□ -1.74
LINC01109-201ENST00000603837 ALPK3Q96L96 1907 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 A0A0C4DFX4 3053 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 ZNF236Q9UL36 1845 aa4.15□□□□□ -1.74
LINC01109-201ENST00000603837 PPP5D1E7EU14 171 aa4.15□□□□□ -1.75
LINC01109-201ENST00000603837 RAB29O14966 203 aa4.15□□□□□ -1.75
LINC01109-201ENST00000603837 CNMDO75829 334 aa4.15□□□□□ -1.75
LINC01109-201ENST00000603837 TSPAN13O95857 204 aa4.15□□□□□ -1.75
LINC01109-201ENST00000603837 PRNPP04156 253 aa4.15□□□□□ -1.75
LINC01109-201ENST00000603837 CD1AP06126 327 aa4.15□□□□□ -1.75
LINC01109-201ENST00000603837 CT62P0C5K7 136 aa4.15□□□□□ -1.75
LINC01109-201ENST00000603837 CD40P25942 277 aa4.15□□□□□ -1.75
LINC01109-201ENST00000603837 CHATP28329 748 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms