RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 CHD8Q9HCK8 2581 aa13.59□□□□□ -0.23
PPFIA3-206ENST00000602655 CBY3A6NI87 242 aa13.59□□□□□ -0.23
PPFIA3-206ENST00000602655 H3BQ15 152 aa13.59□□□□□ -0.23
PPFIA3-206ENST00000602655 SIAH2O43255 324 aa13.59□□□□□ -0.23
PPFIA3-206ENST00000602655 DUS4LO95620 317 aaKnown RBP13.59□□□□□ -0.23
PPFIA3-206ENST00000602655 CX3CR1P49238 355 aa13.59□□□□□ -0.23
PPFIA3-206ENST00000602655 SPOCK1Q08629 439 aa13.59□□□□□ -0.23
PPFIA3-206ENST00000602655 DTWD2Q8NBA8 298 aa13.59□□□□□ -0.23
PPFIA3-206ENST00000602655 ZNF775Q96BV0 537 aaPredicted RBP13.59□□□□□ -0.23
PPFIA3-206ENST00000602655 FRRS1LQ9P0K9 344 aa13.59□□□□□ -0.23
PPFIA3-206ENST00000602655 POLEQ07864 2286 aa13.59□□□□□ -0.23
PPFIA3-206ENST00000602655 TRBV11-1A0A0K0K1C0 115 aa13.59□□□□□ -0.23
PPFIA3-206ENST00000602655 H0YL77 283 aa13.59□□□□□ -0.23
PPFIA3-206ENST00000602655 CRTAPO75718 401 aaPredicted RBP13.59□□□□□ -0.23
PPFIA3-206ENST00000602655 RPLP1P05386 114 aaKnown RBP13.59□□□□□ -0.23
PPFIA3-206ENST00000602655 GZMBP10144 247 aa13.59□□□□□ -0.23
PPFIA3-206ENST00000602655 ERVFRD-1P60508 538 aa13.59□□□□□ -0.23
PPFIA3-206ENST00000602655 SLC2A8Q9NY64 477 aa13.59□□□□□ -0.23
PPFIA3-206ENST00000602655 CKLFQ9UBR5 152 aa13.59□□□□□ -0.23
PPFIA3-206ENST00000602655 ROS1P08922 2347 aa13.58□□□□□ -0.23
PPFIA3-206ENST00000602655 RAB27BO00194 218 aa13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 CST4P01036 141 aa13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 GPR3P46089 330 aa13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 ZNF136P52737 540 aa13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 VAMP2P63027 116 aa13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 DLK1P80370 383 aa13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 FJX1Q86VR8 437 aa13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 VSTM2LQ96N03 204 aa13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 DUSP23Q9BVJ7 150 aa13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 MFRPQ9BY79 579 aa13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 RCL1Q9Y2P8 373 aaKnown RBP13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 EFSO43281 561 aa13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 TACR3P29371 465 aa13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 TMEM33P57088 247 aa13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 PMPCAQ10713 525 aa13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 FHL5Q5TD97 284 aa13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 MDGA2Q7Z553 956 aa13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 ZNF283Q8N7M2 679 aa13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 TAAR8Q969N4 342 aa13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 MUCL1Q96DR8 90 aa13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 CHD3Q12873 2000 aaKnown RBP13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 NCOR2Q9Y618 2525 aa13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 LNP1A1A4G5 178 aa13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 MKRN2OSH3BPM6 223 aa13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 JTBO76095 146 aa13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 UTS2O95399 124 aa13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 CSTBP04080 98 aaKnown RBP13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 OR3A1P47881 315 aa13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 DIO1P49895 249 aa13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 SAPCD1Q5SSQ6 148 aa13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 WFIKKN1Q96NZ8 548 aa13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 ALG12Q9BV10 488 aa13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 SLC25A31Q9H0C2 315 aa13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 KLRF1Q9NZS2 232 aa13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 KLK13Q9UKR3 277 aa13.58□□□□□ -0.24
PPFIA3-206ENST00000602655 IGF2RP11717 2491 aa13.57□□□□□ -0.24
PPFIA3-206ENST00000602655 PCNX3Q9H6A9 2034 aa13.57□□□□□ -0.24
PPFIA3-206ENST00000602655 DSPP15924 2871 aaKnown RBP13.57□□□□□ -0.24
PPFIA3-206ENST00000602655 MPZP25189 248 aa13.57□□□□□ -0.24
PPFIA3-206ENST00000602655 GABRA4P48169 554 aa13.57□□□□□ -0.24
PPFIA3-206ENST00000602655 FOXK1P85037 733 aa13.57□□□□□ -0.24
PPFIA3-206ENST00000602655 PNLIPRP3Q17RR3 467 aa13.57□□□□□ -0.24
PPFIA3-206ENST00000602655 PRSS27Q9BQR3 290 aa13.57□□□□□ -0.24
PPFIA3-206ENST00000602655 MEMO1Q9Y316 297 aa13.57□□□□□ -0.24
PPFIA3-206ENST00000602655 B3GALT1Q9Y5Z6 326 aa13.57□□□□□ -0.24
PPFIA3-206ENST00000602655 JOSD1Q15040 202 aaPredicted RBP13.57□□□□□ -0.24
PPFIA3-206ENST00000602655 ELOBQ15370 118 aa13.57□□□□□ -0.24
PPFIA3-206ENST00000602655 FAM189A2Q15884 450 aa13.57□□□□□ -0.24
PPFIA3-206ENST00000602655 TMEM182Q6ZP80 229 aaPredicted RBP13.57□□□□□ -0.24
PPFIA3-206ENST00000602655 DPY19L4Q7Z388 723 aa13.57□□□□□ -0.24
PPFIA3-206ENST00000602655 D2HGDHQ8N465 521 aa13.57□□□□□ -0.24
PPFIA3-206ENST00000602655 ZPLD1Q8TCW7 415 aa13.57□□□□□ -0.24
PPFIA3-206ENST00000602655 DAZLQ92904 295 aaKnown RBP13.57□□□□□ -0.24
PPFIA3-206ENST00000602655 SLC5A7Q9GZV3 580 aa13.57□□□□□ -0.24
PPFIA3-206ENST00000602655 HAO2Q9NYQ3 351 aa13.57□□□□□ -0.24
PPFIA3-206ENST00000602655 CLDN16Q9Y5I7 305 aa13.57□□□□□ -0.24
PPFIA3-206ENST00000602655 TOX3O15405 576 aaPredicted RBP13.56□□□□□ -0.24
PPFIA3-206ENST00000602655 SLC2A5P22732 501 aa13.56□□□□□ -0.24
PPFIA3-206ENST00000602655 PPP1CCP36873 323 aaKnown RBP13.56□□□□□ -0.24
PPFIA3-206ENST00000602655 ASCL1P50553 236 aa13.56□□□□□ -0.24
PPFIA3-206ENST00000602655 HERPUD1Q15011 391 aa13.56□□□□□ -0.24
PPFIA3-206ENST00000602655 IAH1Q2TAA2 248 aaPredicted RBP13.56□□□□□ -0.24
PPFIA3-206ENST00000602655 BTNL3Q6UXE8 466 aa13.56□□□□□ -0.24
PPFIA3-206ENST00000602655 ZNF101Q8IZC7 436 aa13.56□□□□□ -0.24
PPFIA3-206ENST00000602655 ZNF524Q96C55 264 aa13.56□□□□□ -0.24
PPFIA3-206ENST00000602655 OR10C1Q96KK4 312 aa13.56□□□□□ -0.24
PPFIA3-206ENST00000602655 GAB2Q9UQC2 676 aa13.56□□□□□ -0.24
PPFIA3-206ENST00000602655 FLVCR1Q9Y5Y0 555 aa13.56□□□□□ -0.24
PPFIA3-206ENST00000602655 PCNX1Q96RV3 2341 aa13.56□□□□□ -0.24
PPFIA3-206ENST00000602655 NDUFB2O95178 105 aa13.56□□□□□ -0.24
PPFIA3-206ENST00000602655 CST2P09228 141 aa13.56□□□□□ -0.24
PPFIA3-206ENST00000602655 TMEM11P17152 192 aa13.56□□□□□ -0.24
PPFIA3-206ENST00000602655 PAX5Q02548 391 aa13.56□□□□□ -0.24
PPFIA3-206ENST00000602655 EIPR1Q53HC9 387 aa13.56□□□□□ -0.24
PPFIA3-206ENST00000602655 ULK3Q6PHR2 472 aa13.56□□□□□ -0.24
PPFIA3-206ENST00000602655 C9orf40Q8IXQ3 194 aa13.56□□□□□ -0.24
PPFIA3-206ENST00000602655 CPEB3Q8NE35 698 aaKnown RBP13.56□□□□□ -0.24
PPFIA3-206ENST00000602655 ABHD5Q8WTS1 349 aa13.56□□□□□ -0.24
PPFIA3-206ENST00000602655 PPP1R14AQ96A00 147 aa13.56□□□□□ -0.24
PPFIA3-206ENST00000602655 NIPSNAP3BQ9BS92 247 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 226.5 ms