RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 KIR2DS1A0A191URI9 304 aa11.5□□□□□ -0.57
UPF1-205ENST00000598209 NKX6-3A6NJ46 265 aa11.5□□□□□ -0.57
UPF1-205ENST00000598209 TMEM212A6NML5 194 aa11.5□□□□□ -0.57
UPF1-205ENST00000598209 H0YJX3 145 aa11.5□□□□□ -0.57
UPF1-205ENST00000598209 ENSAO43768 121 aaKnown RBP11.5□□□□□ -0.57
UPF1-205ENST00000598209 ZFPL1O95159 310 aa11.5□□□□□ -0.57
UPF1-205ENST00000598209 FSHBP01225 129 aa11.5□□□□□ -0.57
UPF1-205ENST00000598209 TFF1P04155 84 aa11.5□□□□□ -0.57
UPF1-205ENST00000598209 PGA5P0DJD9 388 aa11.5□□□□□ -0.57
UPF1-205ENST00000598209 MYL12AP19105 171 aa11.5□□□□□ -0.57
UPF1-205ENST00000598209 AMY2BP19961 511 aa11.5□□□□□ -0.57
UPF1-205ENST00000598209 FUT6P51993 359 aa11.5□□□□□ -0.57
UPF1-205ENST00000598209 GTF2A1P52655 376 aaPredicted RBP11.5□□□□□ -0.57
UPF1-205ENST00000598209 SCGB2A2Q13296 93 aa11.5□□□□□ -0.57
UPF1-205ENST00000598209 CNN3Q15417 329 aaKnown RBP11.5□□□□□ -0.57
UPF1-205ENST00000598209 ATPAF1Q5TC12 328 aaPredicted RBP11.5□□□□□ -0.57
UPF1-205ENST00000598209 OR2G6Q5TZ20 316 aa11.5□□□□□ -0.57
UPF1-205ENST00000598209 CD276Q5ZPR3 534 aa11.5□□□□□ -0.57
UPF1-205ENST00000598209 TMPRSS11AQ6ZMR5 421 aa11.5□□□□□ -0.57
UPF1-205ENST00000598209 ANGPTL5Q86XS5 388 aa11.5□□□□□ -0.57
UPF1-205ENST00000598209 CALHM1Q8IU99 346 aa11.5□□□□□ -0.57
UPF1-205ENST00000598209 FAM216BQ8N7L0 139 aa11.5□□□□□ -0.57
UPF1-205ENST00000598209 POC1AQ8NBT0 407 aa11.5□□□□□ -0.57
UPF1-205ENST00000598209 OR5AK2Q8NH90 309 aa11.5□□□□□ -0.57
UPF1-205ENST00000598209 ANGPTL6Q8NI99 470 aa11.5□□□□□ -0.57
UPF1-205ENST00000598209 ST8SIA4Q92187 359 aa11.5□□□□□ -0.57
UPF1-205ENST00000598209 ZNF488Q96MN9 340 aa11.5□□□□□ -0.57
UPF1-205ENST00000598209 PDCD1LG2Q9BQ51 273 aa11.5□□□□□ -0.57
UPF1-205ENST00000598209 COMMD4Q9H0A8 199 aa11.5□□□□□ -0.57
UPF1-205ENST00000598209 DNTTIP1Q9H147 329 aa11.5□□□□□ -0.57
UPF1-205ENST00000598209 IGKV1-27A0A075B6S5 117 aa11.49□□□□□ -0.57
UPF1-205ENST00000598209 TRBV2A0A0J9YWF9 115 aa11.49□□□□□ -0.57
UPF1-205ENST00000598209 EFCAB10A6NFE3 127 aa11.49□□□□□ -0.57
UPF1-205ENST00000598209 OR2AT4A6NND4 320 aa11.49□□□□□ -0.57
UPF1-205ENST00000598209 NDUFB3O43676 98 aa11.49□□□□□ -0.57
UPF1-205ENST00000598209 XPNPEP2O43895 674 aa11.49□□□□□ -0.57
UPF1-205ENST00000598209 PSG2P11465 335 aa11.49□□□□□ -0.57
UPF1-205ENST00000598209 PIPP12273 146 aaPredicted RBP11.49□□□□□ -0.57
UPF1-205ENST00000598209 ATF1P18846 271 aa11.49□□□□□ -0.57
UPF1-205ENST00000598209 EPHA1P21709 976 aa11.49□□□□□ -0.57
UPF1-205ENST00000598209 MPZP25189 248 aa11.49□□□□□ -0.57
UPF1-205ENST00000598209 ST3GAL4Q11206 333 aa11.49□□□□□ -0.57
UPF1-205ENST00000598209 IKZF1Q13422 519 aa11.49□□□□□ -0.57
UPF1-205ENST00000598209 MED21Q13503 144 aa11.49□□□□□ -0.57
UPF1-205ENST00000598209 ARMCX4Q5H9R4 360 aa11.49□□□□□ -0.57
UPF1-205ENST00000598209 ACP7Q6ZNF0 438 aa11.49□□□□□ -0.57
UPF1-205ENST00000598209 ZNF788Q6ZQV5 615 aa11.49□□□□□ -0.57
UPF1-205ENST00000598209 UTS2BQ765I0 119 aa11.49□□□□□ -0.57
UPF1-205ENST00000598209 FGFRL1Q8N441 504 aa11.49□□□□□ -0.57
UPF1-205ENST00000598209 BPIFB6Q8NFQ5 453 aa11.49□□□□□ -0.57
UPF1-205ENST00000598209 BORCS8Q96FH0 119 aa11.49□□□□□ -0.57
UPF1-205ENST00000598209 GAFA1Q96PS6 74 aa11.49□□□□□ -0.57
UPF1-205ENST00000598209 PKIBQ9C010 78 aa11.49□□□□□ -0.57
UPF1-205ENST00000598209 PLCXD1Q9NUJ7 323 aa11.49□□□□□ -0.57
UPF1-205ENST00000598209 CHCHD3Q9NX63 227 aaKnown RBP11.49□□□□□ -0.57
UPF1-205ENST00000598209 RASL12Q9NYN1 266 aa11.49□□□□□ -0.57
UPF1-205ENST00000598209 CNOT2Q9NZN8 540 aaKnown RBP11.49□□□□□ -0.57
UPF1-205ENST00000598209 CLEC2DQ9UHP7 191 aa11.49□□□□□ -0.57
UPF1-205ENST00000598209 PSORS1C1Q9UIG5 152 aa11.49□□□□□ -0.57
UPF1-205ENST00000598209 MXRA5Q9NR99 2828 aa11.49□□□□□ -0.57
UPF1-205ENST00000598209 IGKV1D-17A0A075B6S4 117 aa11.48□□□□□ -0.57
UPF1-205ENST00000598209 IGKV1-9A0A0C4DH69 117 aa11.48□□□□□ -0.57
UPF1-205ENST00000598209 NOS1APO75052 506 aaPredicted RBP11.48□□□□□ -0.57
UPF1-205ENST00000598209 ECDO95905 644 aaPredicted RBP11.48□□□□□ -0.57
UPF1-205ENST00000598209 RPSAP08865 295 aaKnown RBP11.48□□□□□ -0.57
UPF1-205ENST00000598209 SELLP14151 372 aa11.48□□□□□ -0.57
UPF1-205ENST00000598209 GABRA2P47869 451 aa11.48□□□□□ -0.57
UPF1-205ENST00000598209 IL24Q13007 206 aa11.48□□□□□ -0.57
UPF1-205ENST00000598209 SMIM21Q3B7S5 101 aa11.48□□□□□ -0.57
UPF1-205ENST00000598209 C11orf91Q3C1V1 193 aa11.48□□□□□ -0.57
UPF1-205ENST00000598209 CCDC58Q4VC31 144 aa11.48□□□□□ -0.57
UPF1-205ENST00000598209 LRRC10Q5BKY1 277 aa11.48□□□□□ -0.57
UPF1-205ENST00000598209 XAF1Q6GPH4 301 aa11.48□□□□□ -0.57
UPF1-205ENST00000598209 RPL22L1Q6P5R6 122 aaKnown RBP11.48□□□□□ -0.57
UPF1-205ENST00000598209 AHSA2Q719I0 299 aa11.48□□□□□ -0.57
UPF1-205ENST00000598209 BTN2A1Q7KYR7 527 aa11.48□□□□□ -0.57
UPF1-205ENST00000598209 BATF2Q8N1L9 274 aa11.48□□□□□ -0.57
UPF1-205ENST00000598209 DNAAF1Q8NEP3 725 aa11.48□□□□□ -0.57
UPF1-205ENST00000598209 OR52N1Q8NH53 320 aa11.48□□□□□ -0.57
UPF1-205ENST00000598209 MED30Q96HR3 178 aa11.48□□□□□ -0.57
UPF1-205ENST00000598209 NRIP2Q9BQI9 281 aa11.48□□□□□ -0.57
UPF1-205ENST00000598209 VCX3BQ9H321 246 aa11.48□□□□□ -0.57
UPF1-205ENST00000598209 OCEL1Q9H607 264 aa11.48□□□□□ -0.57
UPF1-205ENST00000598209 ZNF222Q9UK12 451 aa11.48□□□□□ -0.57
UPF1-205ENST00000598209 SIGLEC5O15389 551 aa11.47□□□□□ -0.57
UPF1-205ENST00000598209 NXPH2O95156 264 aa11.47□□□□□ -0.57
UPF1-205ENST00000598209 PLATP00750 562 aa11.47□□□□□ -0.57
UPF1-205ENST00000598209 LIPFP07098 398 aa11.47□□□□□ -0.57
UPF1-205ENST00000598209 ACAA1P09110 424 aaPredicted RBP11.47□□□□□ -0.57
UPF1-205ENST00000598209 PPIAL4GP0DN37 164 aa11.47□□□□□ -0.57
UPF1-205ENST00000598209 PRKACBP22694 351 aa11.47□□□□□ -0.57
UPF1-205ENST00000598209 AZGP1P25311 298 aaKnown RBP11.47□□□□□ -0.57
UPF1-205ENST00000598209 RBP2P50120 134 aa11.47□□□□□ -0.57
UPF1-205ENST00000598209 ATP1B3P54709 279 aa11.47□□□□□ -0.57
UPF1-205ENST00000598209 FGF12P61328 243 aa11.47□□□□□ -0.57
UPF1-205ENST00000598209 IL13RA1P78552 427 aa11.47□□□□□ -0.57
UPF1-205ENST00000598209 SRSF2Q01130 221 aaKnown RBP11.47□□□□□ -0.57
UPF1-205ENST00000598209 CDK5R1Q15078 307 aa11.47□□□□□ -0.57
UPF1-205ENST00000598209 DGUOKQ16854 277 aa11.47□□□□□ -0.57
UPF1-205ENST00000598209 KLF17Q5JT82 389 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms