RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 PPP1R3EQ9H7J1 279 aa13.36□□□□□ -0.27
CIRBP-241ENST00000593048 CNTD2Q9H8S5 307 aa13.36□□□□□ -0.27
CIRBP-241ENST00000593048 ACOXLQ9NUZ1 547 aa13.36□□□□□ -0.27
CIRBP-241ENST00000593048 ZNF319Q9P2F9 582 aa13.36□□□□□ -0.27
CIRBP-241ENST00000593048 DNAJB11Q9UBS4 358 aa13.36□□□□□ -0.27
CIRBP-241ENST00000593048 MPC1Q9Y5U8 109 aa13.36□□□□□ -0.27
CIRBP-241ENST00000593048 DOCK11Q5JSL3 2073 aa13.36□□□□□ -0.27
CIRBP-241ENST00000593048 IGHV1-69DA0A0B4J2H0 117 aa13.35□□□□□ -0.27
CIRBP-241ENST00000593048 ZNF850A8MQ14 1090 aa13.35□□□□□ -0.27
CIRBP-241ENST00000593048 NDUFB3O43676 98 aa13.35□□□□□ -0.27
CIRBP-241ENST00000593048 GABARAPO95166 117 aa13.35□□□□□ -0.27
CIRBP-241ENST00000593048 IGHV1-69P01742 117 aa13.35□□□□□ -0.27
CIRBP-241ENST00000593048 C21orf33P30042 268 aaPredicted RBP13.35□□□□□ -0.27
CIRBP-241ENST00000593048 GP2P55259 537 aaKnown RBP13.35□□□□□ -0.27
CIRBP-241ENST00000593048 PRDX4Q13162 271 aa13.35□□□□□ -0.27
CIRBP-241ENST00000593048 WDR38Q5JTN6 314 aa13.35□□□□□ -0.27
CIRBP-241ENST00000593048 PRR31Q5SQ13 230 aa13.35□□□□□ -0.27
CIRBP-241ENST00000593048 LCN1P1Q5VSP4 162 aa13.35□□□□□ -0.27
CIRBP-241ENST00000593048 PDZD9Q8IXQ8 264 aa13.35□□□□□ -0.27
CIRBP-241ENST00000593048 NANOGP1Q8N7R0 232 aa13.35□□□□□ -0.27
CIRBP-241ENST00000593048 TBC1D15Q8TC07 691 aa13.35□□□□□ -0.27
CIRBP-241ENST00000593048 PIGCQ92535 297 aa13.35□□□□□ -0.27
CIRBP-241ENST00000593048 YIPF6Q96EC8 236 aa13.35□□□□□ -0.27
CIRBP-241ENST00000593048 MRPL48Q96GC5 212 aaKnown RBP13.35□□□□□ -0.27
CIRBP-241ENST00000593048 HIST1H2AAQ96QV6 131 aa13.35□□□□□ -0.27
CIRBP-241ENST00000593048 SIRPDQ9H106 197 aa13.35□□□□□ -0.27
CIRBP-241ENST00000593048 ABCB9Q9NP78 766 aa13.35□□□□□ -0.27
CIRBP-241ENST00000593048 ONECUT1Q9UBC0 465 aa13.35□□□□□ -0.27
CIRBP-241ENST00000593048 AASSQ9UDR5 926 aa13.35□□□□□ -0.27
CIRBP-241ENST00000593048 ENPP5Q9UJA9 477 aa13.35□□□□□ -0.27
CIRBP-241ENST00000593048 RPUSD1Q9UJJ7 312 aaKnown RBP13.35□□□□□ -0.27
CIRBP-241ENST00000593048 LAMP5Q9UJQ1 280 aa13.35□□□□□ -0.27
CIRBP-241ENST00000593048 PKD1L1Q8TDX9 2849 aa13.35□□□□□ -0.27
CIRBP-241ENST00000593048 KCNAB3O43448 404 aa13.34□□□□□ -0.27
CIRBP-241ENST00000593048 KNG1P01042 644 aa13.34□□□□□ -0.27
CIRBP-241ENST00000593048 IGHA1P01876 353 aa13.34□□□□□ -0.27
CIRBP-241ENST00000593048 MELTFP08582 738 aa13.34□□□□□ -0.27
CIRBP-241ENST00000593048 ACTC1P68032 377 aa13.34□□□□□ -0.27
CIRBP-241ENST00000593048 ACTA1P68133 377 aa13.34□□□□□ -0.27
CIRBP-241ENST00000593048 ACSM1Q08AH1 577 aa13.34□□□□□ -0.27
CIRBP-241ENST00000593048 IKZF1Q13422 519 aa13.34□□□□□ -0.27
CIRBP-241ENST00000593048 LRRC10Q5BKY1 277 aa13.34□□□□□ -0.27
CIRBP-241ENST00000593048 GPR107Q5VW38 600 aa13.34□□□□□ -0.27
CIRBP-241ENST00000593048 KRT77Q7Z794 578 aa13.34□□□□□ -0.27
CIRBP-241ENST00000593048 CMTM4Q8IZR5 234 aa13.34□□□□□ -0.27
CIRBP-241ENST00000593048 TMEM86BQ8N661 226 aa13.34□□□□□ -0.27
CIRBP-241ENST00000593048 OR5T2Q8NGG2 359 aa13.34□□□□□ -0.27
CIRBP-241ENST00000593048 OR4F5Q8NH21 305 aa13.34□□□□□ -0.27
CIRBP-241ENST00000593048 HAVCR2Q8TDQ0 301 aa13.34□□□□□ -0.27
CIRBP-241ENST00000593048 SSMEM1Q8WWF3 244 aa13.34□□□□□ -0.27
CIRBP-241ENST00000593048 SGCDQ92629 289 aa13.34□□□□□ -0.27
CIRBP-241ENST00000593048 C12orf43Q96C57 262 aaKnown RBP13.34□□□□□ -0.27
CIRBP-241ENST00000593048 LGALS12Q96DT0 336 aa13.34□□□□□ -0.27
CIRBP-241ENST00000593048 ITPKCQ96DU7 683 aa13.34□□□□□ -0.27
CIRBP-241ENST00000593048 RNFT2Q96EX2 444 aa13.34□□□□□ -0.27
CIRBP-241ENST00000593048 RNF170Q96K19 258 aa13.34□□□□□ -0.27
CIRBP-241ENST00000593048 FUNDC2Q9BWH2 189 aa13.34□□□□□ -0.27
CIRBP-241ENST00000593048 CHIAQ9BZP6 476 aa13.34□□□□□ -0.27
CIRBP-241ENST00000593048 SLITRK2Q9H156 845 aa13.34□□□□□ -0.27
CIRBP-241ENST00000593048 NIPAL2Q9H841 368 aa13.34□□□□□ -0.27
CIRBP-241ENST00000593048 BEX1Q9HBH7 125 aa13.34□□□□□ -0.27
CIRBP-241ENST00000593048 AMBNQ9NP70 447 aa13.34□□□□□ -0.27
CIRBP-241ENST00000593048 KPTNQ9Y664 436 aa13.34□□□□□ -0.27
CIRBP-241ENST00000593048 POMT1Q9Y6A1 747 aa13.34□□□□□ -0.27
CIRBP-241ENST00000593048 A0A1B0GUS0 222 aa13.33□□□□□ -0.28
CIRBP-241ENST00000593048 A0A1B0GW55 424 aa13.33□□□□□ -0.28
CIRBP-241ENST00000593048 TMEM210A6NLX4 147 aa13.33□□□□□ -0.28
CIRBP-241ENST00000593048 MYL12BO14950 172 aa13.33□□□□□ -0.28
CIRBP-241ENST00000593048 GPR37O15354 613 aa13.33□□□□□ -0.28
CIRBP-241ENST00000593048 INMTO95050 263 aa13.33□□□□□ -0.28
CIRBP-241ENST00000593048 DUX4L2P0CJ85 424 aa13.33□□□□□ -0.28
CIRBP-241ENST00000593048 DUX4L3P0CJ86 424 aa13.33□□□□□ -0.28
CIRBP-241ENST00000593048 DUX4L4P0CJ87 422 aa13.33□□□□□ -0.28
CIRBP-241ENST00000593048 DUX4L5P0CJ88 424 aa13.33□□□□□ -0.28
CIRBP-241ENST00000593048 DUX4L6P0CJ89 424 aa13.33□□□□□ -0.28
CIRBP-241ENST00000593048 DUX4L7P0CJ90 424 aa13.33□□□□□ -0.28
CIRBP-241ENST00000593048 PSMB9P28065 219 aa13.33□□□□□ -0.28
CIRBP-241ENST00000593048 RAG2P55895 527 aa13.33□□□□□ -0.28
CIRBP-241ENST00000593048 PSMA6P60900 246 aaKnown RBP13.33□□□□□ -0.28
CIRBP-241ENST00000593048 BDH1Q02338 343 aa13.33□□□□□ -0.28
CIRBP-241ENST00000593048 MLLT11Q13015 90 aaPredicted RBP13.33□□□□□ -0.28
CIRBP-241ENST00000593048 SPHARQ15513 63 aa13.33□□□□□ -0.28
CIRBP-241ENST00000593048 CDONQ4KMG0 1287 aa13.33□□□□□ -0.28
CIRBP-241ENST00000593048 DUX4L9Q6RFH8 374 aaPredicted RBP13.33□□□□□ -0.28
CIRBP-241ENST00000593048 VMO1Q7Z5L0 202 aa13.33□□□□□ -0.28
CIRBP-241ENST00000593048 ZDHHC23Q8IYP9 409 aa13.33□□□□□ -0.28
CIRBP-241ENST00000593048 FGFRL1Q8N441 504 aa13.33□□□□□ -0.28
CIRBP-241ENST00000593048 FAM216BQ8N7L0 139 aa13.33□□□□□ -0.28
CIRBP-241ENST00000593048 OR52I1Q8NGK6 324 aa13.33□□□□□ -0.28
CIRBP-241ENST00000593048 OR52N1Q8NH53 320 aa13.33□□□□□ -0.28
CIRBP-241ENST00000593048 OR5P3Q8WZ94 311 aa13.33□□□□□ -0.28
CIRBP-241ENST00000593048 H1FXQ92522 213 aaKnown RBP13.33□□□□□ -0.28
CIRBP-241ENST00000593048 RPL3LQ92901 407 aaKnown RBP13.33□□□□□ -0.28
CIRBP-241ENST00000593048 SEH1LQ96EE3 360 aa13.33□□□□□ -0.28
CIRBP-241ENST00000593048 TLNRD1Q9H1K6 362 aa13.33□□□□□ -0.28
CIRBP-241ENST00000593048 SNTG1Q9NSN8 517 aa13.33□□□□□ -0.28
CIRBP-241ENST00000593048 DUX4Q9UBX2 424 aa13.33□□□□□ -0.28
CIRBP-241ENST00000593048 ZNF391Q9UJN7 358 aa13.33□□□□□ -0.28
CIRBP-241ENST00000593048 FAM96BQ9Y3D0 163 aa13.33□□□□□ -0.28
CIRBP-241ENST00000593048 LRP12Q9Y561 859 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms