RNA–Protein interactions for RNA: ENST00000592594.5

TMC6-223, Transcript of transmembrane channel like 6, human

TSL 4

Gene TMC6, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMC6-223	ENST00000592594	HHLA2	Q9UM44	414 aa		13.52	□□□□□ -0.25
TMC6-223	ENST00000592594	CAB39	Q9Y376	341 aa	Predicted RBP	13.52	□□□□□ -0.25
TMC6-223	ENST00000592594		F8VVB4	439 aa		13.51	□□□□□ -0.25
TMC6-223	ENST00000592594		F8VWA3	439 aa		13.51	□□□□□ -0.25
TMC6-223	ENST00000592594		J3QLI3	93 aa		13.51	□□□□□ -0.25
TMC6-223	ENST00000592594	HNF1A	P20823	631 aa		13.51	□□□□□ -0.25
TMC6-223	ENST00000592594	PCMT1	P22061	227 aa		13.51	□□□□□ -0.25
TMC6-223	ENST00000592594	GATA3	P23771	443 aa		13.51	□□□□□ -0.25
TMC6-223	ENST00000592594	HAAO	P46952	286 aa		13.51	□□□□□ -0.25
TMC6-223	ENST00000592594	SRSF2	Q01130	221 aa	Known RBP	13.51	□□□□□ -0.25
TMC6-223	ENST00000592594	MICB	Q29980	383 aa		13.51	□□□□□ -0.25
TMC6-223	ENST00000592594	ATPAF1	Q5TC12	328 aa	Predicted RBP	13.51	□□□□□ -0.25
TMC6-223	ENST00000592594	ZNF788	Q6ZQV5	615 aa		13.51	□□□□□ -0.25
TMC6-223	ENST00000592594	UTS2B	Q765I0	119 aa		13.51	□□□□□ -0.25
TMC6-223	ENST00000592594	NLRC3	Q7RTR2	1065 aa		13.51	□□□□□ -0.25
TMC6-223	ENST00000592594	C12orf43	Q96C57	262 aa	Known RBP	13.51	□□□□□ -0.25
TMC6-223	ENST00000592594	C10orf35	Q96D05	121 aa		13.51	□□□□□ -0.25
TMC6-223	ENST00000592594	MRPL48	Q96GC5	212 aa	Known RBP	13.51	□□□□□ -0.25
TMC6-223	ENST00000592594	C7orf69	Q9H7B7	122 aa		13.51	□□□□□ -0.25
TMC6-223	ENST00000592594	HES4	Q9HCC6	221 aa		13.51	□□□□□ -0.25
TMC6-223	ENST00000592594	CLN8	Q9UBY8	286 aa		13.51	□□□□□ -0.25
TMC6-223	ENST00000592594	OR5V1	Q9UGF6	321 aa		13.51	□□□□□ -0.25
TMC6-223	ENST00000592594	EXOSC1	Q9Y3B2	195 aa	Known RBP	13.51	□□□□□ -0.25
TMC6-223	ENST00000592594	FAM230A	A0A1W2PPH8	454 aa		13.5	□□□□□ -0.25
TMC6-223	ENST00000592594	IRGM	A1A4Y4	181 aa		13.5	□□□□□ -0.25
TMC6-223	ENST00000592594	TMEM212	A6NML5	194 aa		13.5	□□□□□ -0.25
TMC6-223	ENST00000592594	SLC1A7	O00341	560 aa		13.5	□□□□□ -0.25
TMC6-223	ENST00000592594	DVL1	O14640	695 aa		13.5	□□□□□ -0.25
TMC6-223	ENST00000592594	TMPRSS2	O15393	492 aa		13.5	□□□□□ -0.25
TMC6-223	ENST00000592594	OGG1	O15527	345 aa		13.5	□□□□□ -0.25
TMC6-223	ENST00000592594	NOS1AP	O75052	506 aa	Predicted RBP	13.5	□□□□□ -0.25
TMC6-223	ENST00000592594	MYF6	P23409	242 aa		13.5	□□□□□ -0.25
TMC6-223	ENST00000592594	GBX2	P52951	348 aa	Predicted RBP	13.5	□□□□□ -0.25
TMC6-223	ENST00000592594	ERVK11-1	P61568	191 aa		13.5	□□□□□ -0.25
TMC6-223	ENST00000592594	MRPL28	Q13084	256 aa	Known RBP	13.5	□□□□□ -0.25
TMC6-223	ENST00000592594	KCNJ8	Q15842	424 aa		13.5	□□□□□ -0.25
TMC6-223	ENST00000592594	DGUOK	Q16854	277 aa		13.5	□□□□□ -0.25
TMC6-223	ENST00000592594	TUSC1	Q2TAM9	212 aa		13.5	□□□□□ -0.25
TMC6-223	ENST00000592594	IZUMO2	Q6UXV1	221 aa		13.5	□□□□□ -0.25
TMC6-223	ENST00000592594	ACP7	Q6ZNF0	438 aa		13.5	□□□□□ -0.25
TMC6-223	ENST00000592594	ZNF676	Q8N7Q3	588 aa		13.5	□□□□□ -0.25
TMC6-223	ENST00000592594	BPIFB6	Q8NFQ5	453 aa		13.5	□□□□□ -0.25
TMC6-223	ENST00000592594	OR13C3	Q8NGS6	347 aa		13.5	□□□□□ -0.25
TMC6-223	ENST00000592594	OR52N1	Q8NH53	320 aa		13.5	□□□□□ -0.25
TMC6-223	ENST00000592594	RAB40A	Q8WXH6	277 aa		13.5	□□□□□ -0.25
TMC6-223	ENST00000592594	GATAD2B	Q8WXI9	593 aa		13.5	□□□□□ -0.25
TMC6-223	ENST00000592594	PP6455	Q8WZ26	134 aa		13.5	□□□□□ -0.25
TMC6-223	ENST00000592594	NRIP2	Q9BQI9	281 aa		13.5	□□□□□ -0.25
TMC6-223	ENST00000592594	ANKRD60	Q9BZ19	345 aa		13.5	□□□□□ -0.25
TMC6-223	ENST00000592594	TRIM36	Q9NQ86	728 aa		13.5	□□□□□ -0.25
TMC6-223	ENST00000592594	NLK	Q9UBE8	527 aa		13.5	□□□□□ -0.25
TMC6-223	ENST00000592594	TRBV2	A0A0J9YWF9	115 aa		13.49	□□□□□ -0.25
TMC6-223	ENST00000592594	EFCAB10	A6NFE3	127 aa		13.49	□□□□□ -0.25
TMC6-223	ENST00000592594	NDUFA2	O43678	99 aa		13.49	□□□□□ -0.25
TMC6-223	ENST00000592594	GATB	O75879	557 aa	Known RBP	13.49	□□□□□ -0.25
TMC6-223	ENST00000592594	PSG2	P11465	335 aa		13.49	□□□□□ -0.25
TMC6-223	ENST00000592594	ATF1	P18846	271 aa		13.49	□□□□□ -0.25
TMC6-223	ENST00000592594	GLRA1	P23415	457 aa		13.49	□□□□□ -0.25
TMC6-223	ENST00000592594	CEBPD	P49716	269 aa	Predicted RBP	13.49	□□□□□ -0.25
TMC6-223	ENST00000592594	C6orf141	Q5SZD1	244 aa		13.49	□□□□□ -0.25
TMC6-223	ENST00000592594	ZNF573	Q86YE8	665 aa		13.49	□□□□□ -0.25
TMC6-223	ENST00000592594	CD177	Q8N6Q3	437 aa		13.49	□□□□□ -0.25
TMC6-223	ENST00000592594	ZFP41	Q8N8Y5	198 aa		13.49	□□□□□ -0.25
TMC6-223	ENST00000592594	OR13C5	Q8NGS8	318 aa		13.49	□□□□□ -0.25
TMC6-223	ENST00000592594	OR5AK2	Q8NH90	309 aa		13.49	□□□□□ -0.25
TMC6-223	ENST00000592594	PGLYRP3	Q96LB9	341 aa		13.49	□□□□□ -0.25
TMC6-223	ENST00000592594	TECTB	Q96PL2	329 aa		13.49	□□□□□ -0.25
TMC6-223	ENST00000592594	NUDT16L1	Q9BRJ7	211 aa	Known RBP	13.49	□□□□□ -0.25
TMC6-223	ENST00000592594	PKIB	Q9C010	78 aa		13.49	□□□□□ -0.25
TMC6-223	ENST00000592594	MTCH1	Q9NZJ7	389 aa		13.49	□□□□□ -0.25
TMC6-223	ENST00000592594	METRN	Q9UJH8	293 aa		13.49	□□□□□ -0.25
TMC6-223	ENST00000592594	MAB21L2	Q9Y586	359 aa		13.49	□□□□□ -0.25
TMC6-223	ENST00000592594	KIR2DS1	A0A191URI9	304 aa		13.48	□□□□□ -0.25
TMC6-223	ENST00000592594	OR2AT4	A6NND4	320 aa		13.48	□□□□□ -0.25
TMC6-223	ENST00000592594		H0YHG0	523 aa		13.48	□□□□□ -0.25
TMC6-223	ENST00000592594	CCDC159	P0C7I6	412 aa		13.48	□□□□□ -0.25
TMC6-223	ENST00000592594	MYL12A	P19105	171 aa		13.48	□□□□□ -0.25
TMC6-223	ENST00000592594	AZGP1	P25311	298 aa	Known RBP	13.48	□□□□□ -0.25
TMC6-223	ENST00000592594	SRP14	P37108	136 aa	Known RBP	13.48	□□□□□ -0.25
TMC6-223	ENST00000592594	NPY4R	P50391	375 aa		13.48	□□□□□ -0.25
TMC6-223	ENST00000592594	RPS11	P62280	158 aa	Known RBP eCLIP	13.48	□□□□□ -0.25
TMC6-223	ENST00000592594	IL24	Q13007	206 aa		13.48	□□□□□ -0.25
TMC6-223	ENST00000592594	CCDC58	Q4VC31	144 aa		13.48	□□□□□ -0.25
TMC6-223	ENST00000592594	DMKN	Q6E0U4	476 aa	Predicted RBP	13.48	□□□□□ -0.25
TMC6-223	ENST00000592594	ZNF529	Q6P280	563 aa		13.48	□□□□□ -0.25
TMC6-223	ENST00000592594	RPL22L1	Q6P5R6	122 aa	Known RBP	13.48	□□□□□ -0.25
TMC6-223	ENST00000592594	PARP16	Q8N5Y8	322 aa		13.48	□□□□□ -0.25
TMC6-223	ENST00000592594	ZNF671	Q8TAW3	534 aa		13.48	□□□□□ -0.25
TMC6-223	ENST00000592594	SMIM19	Q96E16	107 aa		13.48	□□□□□ -0.25
TMC6-223	ENST00000592594	SPACA5	Q96QH8	159 aa		13.48	□□□□□ -0.25
TMC6-223	ENST00000592594	BABAM2	Q9NXR7	383 aa		13.48	□□□□□ -0.25
TMC6-223	ENST00000592594	DNAJB11	Q9UBS4	358 aa		13.48	□□□□□ -0.25
TMC6-223	ENST00000592594	SIGLEC5	O15389	551 aa		13.47	□□□□□ -0.25
TMC6-223	ENST00000592594	PLAT	P00750	562 aa		13.47	□□□□□ -0.25
TMC6-223	ENST00000592594	MT-ND2	P03891	347 aa		13.47	□□□□□ -0.25
TMC6-223	ENST00000592594	CDK1	P06493	297 aa		13.47	□□□□□ -0.25
TMC6-223	ENST00000592594	ACAA1	P09110	424 aa	Predicted RBP	13.47	□□□□□ -0.25
TMC6-223	ENST00000592594	MMP9	P14780	707 aa		13.47	□□□□□ -0.25
TMC6-223	ENST00000592594	ZNF20	P17024	532 aa		13.47	□□□□□ -0.25
TMC6-223	ENST00000592594	FUT6	P51993	359 aa		13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms