RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 MPPED2Q15777 294 aa8.77□□□□□ -1.01
CCDC47-203ENST00000580986 C1orf100Q5SVJ3 147 aa8.77□□□□□ -1.01
CCDC47-203ENST00000580986 DDI2Q5TDH0 399 aa8.77□□□□□ -1.01
CCDC47-203ENST00000580986 GLT8D1Q68CQ7 371 aa8.77□□□□□ -1.01
CCDC47-203ENST00000580986 C22orf42Q6IC83 251 aa8.77□□□□□ -1.01
CCDC47-203ENST00000580986 WDR82Q6UXN9 313 aa8.77□□□□□ -1.01
CCDC47-203ENST00000580986 ASCL4Q6XD76 172 aa8.77□□□□□ -1.01
CCDC47-203ENST00000580986 SLC16A12Q6ZSM3 486 aa8.77□□□□□ -1.01
CCDC47-203ENST00000580986 FAM90A1Q86YD7 464 aa8.77□□□□□ -1.01
CCDC47-203ENST00000580986 C11orf53Q8IXP5 236 aa8.77□□□□□ -1.01
CCDC47-203ENST00000580986 MKXQ8IYA7 352 aa8.77□□□□□ -1.01
CCDC47-203ENST00000580986 PNLDC1Q8NA58 520 aaKnown RBP8.77□□□□□ -1.01
CCDC47-203ENST00000580986 SCCPDHQ8NBX0 429 aa8.77□□□□□ -1.01
CCDC47-203ENST00000580986 Q8NFD4 153 aa8.77□□□□□ -1.01
CCDC47-203ENST00000580986 OR52N4Q8NGI2 321 aa8.77□□□□□ -1.01
CCDC47-203ENST00000580986 ZNF671Q8TAW3 534 aa8.77□□□□□ -1.01
CCDC47-203ENST00000580986 RAB2BQ8WUD1 216 aa8.77□□□□□ -1.01
CCDC47-203ENST00000580986 DVL3Q92997 716 aaPredicted RBP8.77□□□□□ -1.01
CCDC47-203ENST00000580986 TMIGD2Q96BF3 282 aa8.77□□□□□ -1.01
CCDC47-203ENST00000580986 CHCHD6Q9BRQ6 235 aa8.77□□□□□ -1.01
CCDC47-203ENST00000580986 SEBOXQ9HB31 216 aaPredicted RBP8.77□□□□□ -1.01
CCDC47-203ENST00000580986 EXOSC4Q9NPD3 245 aaKnown RBP8.77□□□□□ -1.01
CCDC47-203ENST00000580986 TMEM106BQ9NUM4 274 aa8.77□□□□□ -1.01
CCDC47-203ENST00000580986 PGPEP1Q9NXJ5 209 aa8.77□□□□□ -1.01
CCDC47-203ENST00000580986 IL36GQ9NZH8 169 aa8.77□□□□□ -1.01
CCDC47-203ENST00000580986 RNF7Q9UBF6 113 aa8.77□□□□□ -1.01
CCDC47-203ENST00000580986 GHRLQ9UBU3 117 aa8.77□□□□□ -1.01
CCDC47-203ENST00000580986 NPTNQ9Y639 398 aa8.77□□□□□ -1.01
CCDC47-203ENST00000580986 FAM230AA0A1W2PPH8 454 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 A0A1W2PPK0 400 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 A6NLC8 198 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 CLDN25C9JDP6 229 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 TMEM178BH3BS89 294 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 SLC17A2O00624 439 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 SLC22A1O15245 554 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 NDUFS7O75251 213 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 ZNF780AO75290 641 aaPredicted RBP8.76□□□□□ -1.01
CCDC47-203ENST00000580986 CYB5AP00167 134 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 IL1AP01583 271 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 GRPP07492 148 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 UBBP0CG47 229 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 PGA5P0DJD9 388 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 IRF2P14316 349 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 PDLIM4P50479 330 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 SCAND1P57086 179 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 ERVK11-1P61568 191 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 CTF1Q16619 201 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 SPRNQ5BIV9 151 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 PRAMEF6Q5VXH4 476 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 SHEQ5VZ18 495 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 FAM166AQ6J272 317 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 HAGHLQ6PII5 290 aaPredicted RBP8.76□□□□□ -1.01
CCDC47-203ENST00000580986 MOGAT3Q86VF5 341 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 CALHM1Q8IU99 346 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 CROCCP3Q8IVE0 287 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 POC1AQ8NBT0 407 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 OR6M1Q8NGM8 313 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 TRMT10AQ8TBZ6 339 aaKnown RBP8.76□□□□□ -1.01
CCDC47-203ENST00000580986 RPL3LQ92901 407 aaKnown RBP8.76□□□□□ -1.01
CCDC47-203ENST00000580986 YIPF5Q969M3 257 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 C12orf43Q96C57 262 aaKnown RBP8.76□□□□□ -1.01
CCDC47-203ENST00000580986 ORAI1Q96D31 301 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 POM121Q96HA1 1249 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 NRIP2Q9BQI9 281 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 CENPOQ9BU64 300 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 HES4Q9HCC6 221 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 RASL12Q9NYN1 266 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 NDUFA13Q9P0J0 144 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 V9GY05 133 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 FLNBO75369 2602 aaKnown RBP8.76□□□□□ -1.01
CCDC47-203ENST00000580986 DYSFO75923 2080 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 USF3Q68DE3 2245 aa8.76□□□□□ -1.01
CCDC47-203ENST00000580986 LOC100506127A0A0U1RQW1 187 aa8.75□□□□□ -1.01
CCDC47-203ENST00000580986 SMIM31A0A1B0GVY4 71 aa8.75□□□□□ -1.01
CCDC47-203ENST00000580986 SHISA3A0PJX4 238 aa8.75□□□□□ -1.01
CCDC47-203ENST00000580986 CDIPTO14735 213 aa8.75□□□□□ -1.01
CCDC47-203ENST00000580986 KDM4BO94953 1096 aa8.75□□□□□ -1.01
CCDC47-203ENST00000580986 MAS1P04201 325 aa8.75□□□□□ -1.01
CCDC47-203ENST00000580986 MUC1P15941 1255 aaPredicted RBP8.75□□□□□ -1.01
CCDC47-203ENST00000580986 RAB3BP20337 219 aa8.75□□□□□ -1.01
CCDC47-203ENST00000580986 PMELP40967 661 aa8.75□□□□□ -1.01
CCDC47-203ENST00000580986 PTGFRP43088 359 aa8.75□□□□□ -1.01
CCDC47-203ENST00000580986 GPR176Q14439 515 aa8.75□□□□□ -1.01
CCDC47-203ENST00000580986 KCNJ8Q15842 424 aa8.75□□□□□ -1.01
CCDC47-203ENST00000580986 GPR107Q5VW38 600 aa8.75□□□□□ -1.01
CCDC47-203ENST00000580986 TEX36Q5VZQ5 186 aa8.75□□□□□ -1.01
CCDC47-203ENST00000580986 ELP2Q6IA86 826 aa8.75□□□□□ -1.01
CCDC47-203ENST00000580986 CLEC2AQ6UVW9 174 aa8.75□□□□□ -1.01
CCDC47-203ENST00000580986 PEG10Q86TG7 708 aaKnown RBP8.75□□□□□ -1.01
CCDC47-203ENST00000580986 SATL1Q86VE3 508 aa8.75□□□□□ -1.01
CCDC47-203ENST00000580986 GCSAMQ8N6F7 178 aa8.75□□□□□ -1.01
CCDC47-203ENST00000580986 TBC1D15Q8TC07 691 aa8.75□□□□□ -1.01
CCDC47-203ENST00000580986 NPRL2Q8WTW4 380 aa8.75□□□□□ -1.01
CCDC47-203ENST00000580986 CCL17Q92583 94 aa8.75□□□□□ -1.01
CCDC47-203ENST00000580986 MRPS24Q96EL2 167 aaKnown RBP8.75□□□□□ -1.01
CCDC47-203ENST00000580986 PERPQ96FX8 193 aa8.75□□□□□ -1.01
CCDC47-203ENST00000580986 TIMD4Q96H15 378 aa8.75□□□□□ -1.01
CCDC47-203ENST00000580986 GPER1Q99527 375 aa8.75□□□□□ -1.01
CCDC47-203ENST00000580986 MRI1Q9BV20 369 aa8.75□□□□□ -1.01
CCDC47-203ENST00000580986 RBM38Q9H0Z9 239 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms