RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 AQP3Q92482 292 aa12.07□□□□□ -0.48
SKA2-205ENST00000580541 RAB1CQ92928 201 aa12.07□□□□□ -0.48
SKA2-205ENST00000580541 PERPQ96FX8 193 aa12.07□□□□□ -0.48
SKA2-205ENST00000580541 MRI1Q9BV20 369 aa12.07□□□□□ -0.48
SKA2-205ENST00000580541 METTL9Q9H1A3 318 aa12.07□□□□□ -0.48
SKA2-205ENST00000580541 PLGRKTQ9HBL7 147 aa12.07□□□□□ -0.48
SKA2-205ENST00000580541 CELSR2Q9HCU4 2923 aa12.07□□□□□ -0.48
SKA2-205ENST00000580541 BATF3Q9NR55 127 aa12.07□□□□□ -0.48
SKA2-205ENST00000580541 TMEM106BQ9NUM4 274 aa12.07□□□□□ -0.48
SKA2-205ENST00000580541 AK6Q9Y3D8 172 aaKnown RBP12.07□□□□□ -0.48
SKA2-205ENST00000580541 HECTD1Q9ULT8 2610 aa12.07□□□□□ -0.48
SKA2-205ENST00000580541 CHD3Q12873 2000 aaKnown RBP12.06□□□□□ -0.48
SKA2-205ENST00000580541 NOTOA8MTQ0 251 aa12.06□□□□□ -0.48
SKA2-205ENST00000580541 ZNF701M0R085 212 aaPredicted RBP12.06□□□□□ -0.48
SKA2-205ENST00000580541 NOS1APO75052 506 aaPredicted RBP12.06□□□□□ -0.48
SKA2-205ENST00000580541 NCR1O76036 304 aa12.06□□□□□ -0.48
SKA2-205ENST00000580541 CDRT1O95170 752 aa12.06□□□□□ -0.48
SKA2-205ENST00000580541 FSTL3O95633 263 aa12.06□□□□□ -0.48
SKA2-205ENST00000580541 CSTBP04080 98 aaKnown RBP12.06□□□□□ -0.48
SKA2-205ENST00000580541 CD37P11049 281 aa12.06□□□□□ -0.48
SKA2-205ENST00000580541 COL8A2P25067 703 aa12.06□□□□□ -0.48
SKA2-205ENST00000580541 HTR2CP28335 458 aa12.06□□□□□ -0.48
SKA2-205ENST00000580541 RSU1Q15404 277 aa12.06□□□□□ -0.48
SKA2-205ENST00000580541 CARTPTQ16568 116 aa12.06□□□□□ -0.48
SKA2-205ENST00000580541 PRSS57Q6UWY2 283 aa12.06□□□□□ -0.48
SKA2-205ENST00000580541 WDR82Q6UXN9 313 aa12.06□□□□□ -0.48
SKA2-205ENST00000580541 SLC25A26Q70HW3 274 aa12.06□□□□□ -0.48
SKA2-205ENST00000580541 OR6M1Q8NGM8 313 aa12.06□□□□□ -0.48
SKA2-205ENST00000580541 TNFAIP8L1Q8WVP5 186 aa12.06□□□□□ -0.48
SKA2-205ENST00000580541 SPACA5Q96QH8 159 aa12.06□□□□□ -0.48
SKA2-205ENST00000580541 FAM192AQ9GZU8 254 aa12.06□□□□□ -0.48
SKA2-205ENST00000580541 ELL3Q9HB65 397 aaPredicted RBP12.06□□□□□ -0.48
SKA2-205ENST00000580541 GLS2Q9UI32 602 aa12.06□□□□□ -0.48
SKA2-205ENST00000580541 ING4Q9UNL4 249 aa12.06□□□□□ -0.48
SKA2-205ENST00000580541 LRBAP50851 2863 aa12.06□□□□□ -0.48
SKA2-205ENST00000580541 BAHCC1Q9P281 2608 aa12.06□□□□□ -0.48
SKA2-205ENST00000580541 HRNRQ86YZ3 2850 aaPredicted RBP12.05□□□□□ -0.48
SKA2-205ENST00000580541 IGKV1-27A0A075B6S5 117 aa12.05□□□□□ -0.48
SKA2-205ENST00000580541 TRAV38-1A0A0B4J264 116 aa12.05□□□□□ -0.48
SKA2-205ENST00000580541 IGHV3-64DA0A0J9YX35 117 aa12.05□□□□□ -0.48
SKA2-205ENST00000580541 TMEM178BH3BS89 294 aa12.05□□□□□ -0.48
SKA2-205ENST00000580541 H3BUI4 141 aa12.05□□□□□ -0.48
SKA2-205ENST00000580541 IGHV4-39P01824 125 aa12.05□□□□□ -0.48
SKA2-205ENST00000580541 GLRA1P23415 457 aa12.05□□□□□ -0.48
SKA2-205ENST00000580541 SERPINB10P48595 397 aa12.05□□□□□ -0.48
SKA2-205ENST00000580541 VBP1P61758 197 aa12.05□□□□□ -0.48
SKA2-205ENST00000580541 FAM189A2Q15884 450 aa12.05□□□□□ -0.48
SKA2-205ENST00000580541 RAB11BQ15907 218 aa12.05□□□□□ -0.48
SKA2-205ENST00000580541 CTF1Q16619 201 aa12.05□□□□□ -0.48
SKA2-205ENST00000580541 MICBQ29980 383 aa12.05□□□□□ -0.48
SKA2-205ENST00000580541 C1orf100Q5SVJ3 147 aa12.05□□□□□ -0.48
SKA2-205ENST00000580541 SHEQ5VZ18 495 aa12.05□□□□□ -0.48
SKA2-205ENST00000580541 AWAT2Q6E213 333 aa12.05□□□□□ -0.48
SKA2-205ENST00000580541 SLC16A12Q6ZSM3 486 aa12.05□□□□□ -0.48
SKA2-205ENST00000580541 WDR86Q86TI4 376 aa12.05□□□□□ -0.48
SKA2-205ENST00000580541 FAM90A1Q86YD7 464 aa12.05□□□□□ -0.48
SKA2-205ENST00000580541 CALHM1Q8IU99 346 aa12.05□□□□□ -0.48
SKA2-205ENST00000580541 C11orf53Q8IXP5 236 aa12.05□□□□□ -0.48
SKA2-205ENST00000580541 POC1AQ8NBT0 407 aa12.05□□□□□ -0.48
SKA2-205ENST00000580541 LRRC29Q8WV35 223 aa12.05□□□□□ -0.48
SKA2-205ENST00000580541 FAM168AQ92567 244 aa12.05□□□□□ -0.48
SKA2-205ENST00000580541 RFT1Q96AA3 541 aa12.05□□□□□ -0.48
SKA2-205ENST00000580541 DGCR14Q96DF8 476 aaKnown RBP12.05□□□□□ -0.48
SKA2-205ENST00000580541 CEP19Q96LK0 163 aa12.05□□□□□ -0.48
SKA2-205ENST00000580541 CNTD2Q9H8S5 307 aa12.05□□□□□ -0.48
SKA2-205ENST00000580541 SMURF1Q9HCE7 757 aa12.05□□□□□ -0.48
SKA2-205ENST00000580541 MRPS28Q9Y2Q9 187 aaKnown RBP12.05□□□□□ -0.48
SKA2-205ENST00000580541 PPIAL4EA0A075B759 164 aa12.04□□□□□ -0.48
SKA2-205ENST00000580541 IFITM5A6NNB3 132 aa12.04□□□□□ -0.48
SKA2-205ENST00000580541 PPIAL4DF5H284 164 aa12.04□□□□□ -0.48
SKA2-205ENST00000580541 SLC17A2O00624 439 aa12.04□□□□□ -0.48
SKA2-205ENST00000580541 PPIHO43447 177 aaKnown RBP12.04□□□□□ -0.48
SKA2-205ENST00000580541 NDUFA2O43678 99 aa12.04□□□□□ -0.48
SKA2-205ENST00000580541 KDM4BO94953 1096 aa12.04□□□□□ -0.48
SKA2-205ENST00000580541 NXPH2O95156 264 aa12.04□□□□□ -0.48
SKA2-205ENST00000580541 PLATP00750 562 aa12.04□□□□□ -0.48
SKA2-205ENST00000580541 LHBP01229 141 aa12.04□□□□□ -0.48
SKA2-205ENST00000580541 PGA5P0DJD9 388 aa12.04□□□□□ -0.48
SKA2-205ENST00000580541 PPIAL4FP0DN26 164 aa12.04□□□□□ -0.48
SKA2-205ENST00000580541 MUC1P15941 1255 aaPredicted RBP12.04□□□□□ -0.48
SKA2-205ENST00000580541 ADRA2CP18825 462 aa12.04□□□□□ -0.48
SKA2-205ENST00000580541 SOX6P35712 828 aa12.04□□□□□ -0.48
SKA2-205ENST00000580541 RORCP51449 518 aa12.04□□□□□ -0.48
SKA2-205ENST00000580541 ZP1P60852 638 aa12.04□□□□□ -0.48
SKA2-205ENST00000580541 MXD1Q05195 221 aa12.04□□□□□ -0.48
SKA2-205ENST00000580541 SMIM21Q3B7S5 101 aa12.04□□□□□ -0.48
SKA2-205ENST00000580541 ASCL4Q6XD76 172 aa12.04□□□□□ -0.48
SKA2-205ENST00000580541 ZNF826PQ6ZT77 177 aa12.04□□□□□ -0.48
SKA2-205ENST00000580541 MUC20Q8N307 709 aaPredicted RBP12.04□□□□□ -0.48
SKA2-205ENST00000580541 OR5D18Q8NGL1 313 aa12.04□□□□□ -0.48
SKA2-205ENST00000580541 TBC1D15Q8TC07 691 aa12.04□□□□□ -0.48
SKA2-205ENST00000580541 C12orf43Q96C57 262 aaKnown RBP12.04□□□□□ -0.48
SKA2-205ENST00000580541 MRPS24Q96EL2 167 aaKnown RBP12.04□□□□□ -0.48
SKA2-205ENST00000580541 PIMREGQ9BSJ6 248 aa12.04□□□□□ -0.48
SKA2-205ENST00000580541 FGF23Q9GZV9 251 aaPredicted RBP12.04□□□□□ -0.48
SKA2-205ENST00000580541 CST11Q9H112 138 aa12.04□□□□□ -0.48
SKA2-205ENST00000580541 TREM2Q9NZC2 230 aa12.04□□□□□ -0.48
SKA2-205ENST00000580541 DNAJB11Q9UBS4 358 aa12.04□□□□□ -0.48
SKA2-205ENST00000580541 RSL24D1Q9UHA3 163 aaKnown RBP12.04□□□□□ -0.48
SKA2-205ENST00000580541 STEAP1Q9UHE8 339 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms