RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 GBX2P52951 348 aaPredicted RBP12.06□□□□□ -0.48
LITAF-208ENST00000571627 ALKBH1Q13686 389 aaKnown RBP12.06□□□□□ -0.48
LITAF-208ENST00000571627 STUMQ69YW2 141 aa12.06□□□□□ -0.48
LITAF-208ENST00000571627 TMPRSS11AQ6ZMR5 421 aa12.06□□□□□ -0.48
LITAF-208ENST00000571627 USP43Q70EL4 1123 aa12.06□□□□□ -0.48
LITAF-208ENST00000571627 FBLIM1Q8WUP2 373 aa12.06□□□□□ -0.48
LITAF-208ENST00000571627 NRG4Q8WWG1 115 aa12.06□□□□□ -0.48
LITAF-208ENST00000571627 TMEM80Q96HE8 168 aa12.06□□□□□ -0.48
LITAF-208ENST00000571627 ZNF649Q9BS31 505 aa12.06□□□□□ -0.48
LITAF-208ENST00000571627 OR51I2Q9H344 312 aa12.06□□□□□ -0.48
LITAF-208ENST00000571627 GPR173Q9NS66 373 aa12.06□□□□□ -0.48
LITAF-208ENST00000571627 CHCHD3Q9NX63 227 aaKnown RBP12.06□□□□□ -0.48
LITAF-208ENST00000571627 DNAJB11Q9UBS4 358 aa12.06□□□□□ -0.48
LITAF-208ENST00000571627 DIMT1Q9UNQ2 313 aaKnown RBP12.06□□□□□ -0.48
LITAF-208ENST00000571627 CAB39Q9Y376 341 aaPredicted RBP12.06□□□□□ -0.48
LITAF-208ENST00000571627 EXOSC1Q9Y3B2 195 aaKnown RBP12.06□□□□□ -0.48
LITAF-208ENST00000571627 EFCAB10A6NFE3 127 aa12.05□□□□□ -0.48
LITAF-208ENST00000571627 GATBO75879 557 aaKnown RBP12.05□□□□□ -0.48
LITAF-208ENST00000571627 SERPINA3P01011 423 aa12.05□□□□□ -0.48
LITAF-208ENST00000571627 CCDC159P0C7I6 412 aa12.05□□□□□ -0.48
LITAF-208ENST00000571627 PIPP12273 146 aaPredicted RBP12.05□□□□□ -0.48
LITAF-208ENST00000571627 TGM4P49221 684 aa12.05□□□□□ -0.48
LITAF-208ENST00000571627 NANOS3P60323 173 aaKnown RBP12.05□□□□□ -0.48
LITAF-208ENST00000571627 IKZF1Q13422 519 aa12.05□□□□□ -0.48
LITAF-208ENST00000571627 RIPK1Q13546 671 aa12.05□□□□□ -0.48
LITAF-208ENST00000571627 CD276Q5ZPR3 534 aa12.05□□□□□ -0.48
LITAF-208ENST00000571627 HAGHLQ6PII5 290 aaPredicted RBP12.05□□□□□ -0.48
LITAF-208ENST00000571627 BTN2A1Q7KYR7 527 aa12.05□□□□□ -0.48
LITAF-208ENST00000571627 ZNF573Q86YE8 665 aa12.05□□□□□ -0.48
LITAF-208ENST00000571627 ZNF676Q8N7Q3 588 aa12.05□□□□□ -0.48
LITAF-208ENST00000571627 ZNF671Q8TAW3 534 aa12.05□□□□□ -0.48
LITAF-208ENST00000571627 PP6455Q8WZ26 134 aa12.05□□□□□ -0.48
LITAF-208ENST00000571627 C12orf43Q96C57 262 aaKnown RBP12.05□□□□□ -0.48
LITAF-208ENST00000571627 ZNF48Q96MX3 618 aaPredicted RBP12.05□□□□□ -0.48
LITAF-208ENST00000571627 PCGF1Q9BSM1 259 aa12.05□□□□□ -0.48
LITAF-208ENST00000571627 MS4A7Q9GZW8 240 aaPredicted RBP12.05□□□□□ -0.48
LITAF-208ENST00000571627 ISG20L2Q9H9L3 353 aaKnown RBP12.05□□□□□ -0.48
LITAF-208ENST00000571627 PLCXD1Q9NUJ7 323 aa12.05□□□□□ -0.48
LITAF-208ENST00000571627 CNOT2Q9NZN8 540 aaKnown RBP12.05□□□□□ -0.48
LITAF-208ENST00000571627 KAAG1Q9UBP8 84 aa12.05□□□□□ -0.48
LITAF-208ENST00000571627 HHLA2Q9UM44 414 aa12.05□□□□□ -0.48
LITAF-208ENST00000571627 SLC7A11Q9UPY5 501 aa12.05□□□□□ -0.48
LITAF-208ENST00000571627 ANKRD61A6NGH8 418 aa12.04□□□□□ -0.48
LITAF-208ENST00000571627 LIMS3P0CW19 117 aa12.04□□□□□ -0.48
LITAF-208ENST00000571627 LIMS4P0CW20 117 aa12.04□□□□□ -0.48
LITAF-208ENST00000571627 PPIAL4GP0DN37 164 aa12.04□□□□□ -0.48
LITAF-208ENST00000571627 AQP4P55087 323 aa12.04□□□□□ -0.48
LITAF-208ENST00000571627 CCDC58Q4VC31 144 aa12.04□□□□□ -0.48
LITAF-208ENST00000571627 BRD3OSQ6XYD6 125 aa12.04□□□□□ -0.48
LITAF-208ENST00000571627 RDH10Q8IZV5 341 aa12.04□□□□□ -0.48
LITAF-208ENST00000571627 ZDHHC22Q8N966 263 aa12.04□□□□□ -0.48
LITAF-208ENST00000571627 AQP3Q92482 292 aa12.04□□□□□ -0.48
LITAF-208ENST00000571627 GGHQ92820 318 aa12.04□□□□□ -0.48
LITAF-208ENST00000571627 ZNF488Q96MN9 340 aa12.04□□□□□ -0.48
LITAF-208ENST00000571627 DUX5Q96PT3 197 aa12.04□□□□□ -0.48
LITAF-208ENST00000571627 JMJD8Q96S16 334 aa12.04□□□□□ -0.48
LITAF-208ENST00000571627 CHST5Q9GZS9 411 aa12.04□□□□□ -0.48
LITAF-208ENST00000571627 COMMD4Q9H0A8 199 aa12.04□□□□□ -0.48
LITAF-208ENST00000571627 MDFIC2A0A1B0GVS7 189 aa12.03□□□□□ -0.48
LITAF-208ENST00000571627 TMEM212A6NML5 194 aa12.03□□□□□ -0.48
LITAF-208ENST00000571627 OR4C45A6NMZ5 311 aa12.03□□□□□ -0.48
LITAF-208ENST00000571627 ZNF879B4DU55 563 aa12.03□□□□□ -0.48
LITAF-208ENST00000571627 TRIM77I1YAP6 450 aa12.03□□□□□ -0.48
LITAF-208ENST00000571627 SYNGR1O43759 233 aa12.03□□□□□ -0.48
LITAF-208ENST00000571627 TOX4O94842 621 aa12.03□□□□□ -0.48
LITAF-208ENST00000571627 PLATP00750 562 aa12.03□□□□□ -0.48
LITAF-208ENST00000571627 MMP9P14780 707 aa12.03□□□□□ -0.48
LITAF-208ENST00000571627 ZNF20P17024 532 aa12.03□□□□□ -0.48
LITAF-208ENST00000571627 GLRA1P23415 457 aa12.03□□□□□ -0.48
LITAF-208ENST00000571627 HSPA13P48723 471 aa12.03□□□□□ -0.48
LITAF-208ENST00000571627 ETV1P50549 477 aa12.03□□□□□ -0.48
LITAF-208ENST00000571627 ST3GAL4Q11206 333 aa12.03□□□□□ -0.48
LITAF-208ENST00000571627 TUSC1Q2TAM9 212 aa12.03□□□□□ -0.48
LITAF-208ENST00000571627 SLC36A1Q7Z2H8 476 aa12.03□□□□□ -0.48
LITAF-208ENST00000571627 BATF2Q8N1L9 274 aa12.03□□□□□ -0.48
LITAF-208ENST00000571627 PNLDC1Q8NA58 520 aaKnown RBP12.03□□□□□ -0.48
LITAF-208ENST00000571627 ANGPTL6Q8NI99 470 aa12.03□□□□□ -0.48
LITAF-208ENST00000571627 NPRL2Q8WTW4 380 aa12.03□□□□□ -0.48
LITAF-208ENST00000571627 GAFA1Q96PS6 74 aa12.03□□□□□ -0.48
LITAF-208ENST00000571627 TBX15Q96SF7 602 aa12.03□□□□□ -0.48
LITAF-208ENST00000571627 NLKQ9UBE8 527 aa12.03□□□□□ -0.48
LITAF-208ENST00000571627 RPUSD1Q9UJJ7 312 aaKnown RBP12.03□□□□□ -0.48
LITAF-208ENST00000571627 POLDIP2Q9Y2S7 368 aa12.03□□□□□ -0.48
LITAF-208ENST00000571627 FBN3Q75N90 2809 aa12.03□□□□□ -0.48
LITAF-208ENST00000571627 IGKV1D-17A0A075B6S4 117 aa12.02□□□□□ -0.49
LITAF-208ENST00000571627 PQLC2LA1A4F0 135 aa12.02□□□□□ -0.49
LITAF-208ENST00000571627 DNAJC9-AS1A6NH13 148 aa12.02□□□□□ -0.49
LITAF-208ENST00000571627 NKX6-3A6NJ46 265 aa12.02□□□□□ -0.49
LITAF-208ENST00000571627 OR2AT4A6NND4 320 aa12.02□□□□□ -0.49
LITAF-208ENST00000571627 J3QT63 122 aa12.02□□□□□ -0.49
LITAF-208ENST00000571627 NDUFB3O43676 98 aa12.02□□□□□ -0.49
LITAF-208ENST00000571627 ATP6V1G2O95670 118 aa12.02□□□□□ -0.49
LITAF-208ENST00000571627 HAAOP46952 286 aa12.02□□□□□ -0.49
LITAF-208ENST00000571627 GABRA2P47869 451 aa12.02□□□□□ -0.49
LITAF-208ENST00000571627 FUT6P51993 359 aa12.02□□□□□ -0.49
LITAF-208ENST00000571627 ARF6P62330 175 aa12.02□□□□□ -0.49
LITAF-208ENST00000571627 UBA52P62987 128 aaKnown RBP12.02□□□□□ -0.49
LITAF-208ENST00000571627 ACTG1P63261 375 aa12.02□□□□□ -0.49
LITAF-208ENST00000571627 CNN3Q15417 329 aaKnown RBP12.02□□□□□ -0.49
LITAF-208ENST00000571627 RUSC1-AS1Q66K80 236 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms