RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 LYG1Q8N1E2 194 aa4.03□□□□□ -1.76
UBR1-208ENST00000569066 OR7G2Q8NG99 324 aa4.03□□□□□ -1.76
UBR1-208ENST00000569066 OR5T3Q8NGG3 340 aa4.03□□□□□ -1.76
UBR1-208ENST00000569066 CDS1Q92903 461 aa4.03□□□□□ -1.76
UBR1-208ENST00000569066 TM4SF18Q96CE8 201 aa4.03□□□□□ -1.76
UBR1-208ENST00000569066 PRRC1Q96M27 445 aa4.03□□□□□ -1.76
UBR1-208ENST00000569066 HOPXQ9BPY8 73 aaPredicted RBP4.03□□□□□ -1.76
UBR1-208ENST00000569066 ZNF2Q9BSG1 426 aaPredicted RBP4.03□□□□□ -1.76
UBR1-208ENST00000569066 PCBD2Q9H0N5 130 aa4.03□□□□□ -1.76
UBR1-208ENST00000569066 HDHD2Q9H0R4 259 aa4.03□□□□□ -1.76
UBR1-208ENST00000569066 METTL8Q9H825 291 aaKnown RBP4.03□□□□□ -1.76
UBR1-208ENST00000569066 ZNF430Q9H8G1 570 aaPredicted RBP4.03□□□□□ -1.76
UBR1-208ENST00000569066 NAGKQ9UJ70 344 aa4.03□□□□□ -1.76
UBR1-208ENST00000569066 FBXL3Q9UKT7 428 aa4.03□□□□□ -1.76
UBR1-208ENST00000569066 SLC25A15Q9Y619 301 aa4.03□□□□□ -1.76
UBR1-208ENST00000569066 TUBGCP6Q96RT7 1819 aa4.03□□□□□ -1.76
UBR1-208ENST00000569066 PBRM1Q86U86 1689 aa4.03□□□□□ -1.76
UBR1-208ENST00000569066 MYO5CQ9NQX4 1742 aa4.03□□□□□ -1.76
UBR1-208ENST00000569066 INO80Q9ULG1 1556 aaPredicted RBP4.02□□□□□ -1.77
UBR1-208ENST00000569066 A0A1W2PP18 115 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 CHP2O43745 196 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 FAM189A1O60320 539 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 CLIC3O95833 236 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 GIPP09681 153 aaPredicted RBP4.02□□□□□ -1.77
UBR1-208ENST00000569066 S100A11P31949 105 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 LSM6P62312 80 aaKnown RBP4.02□□□□□ -1.77
UBR1-208ENST00000569066 GNB2P62879 340 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 TFAMQ00059 246 aaKnown RBP4.02□□□□□ -1.77
UBR1-208ENST00000569066 KRR1Q13601 381 aaKnown RBP4.02□□□□□ -1.77
UBR1-208ENST00000569066 KIAA0087Q14695 138 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 TAF1AQ15573 450 aaPredicted RBP4.02□□□□□ -1.77
UBR1-208ENST00000569066 LRRC26Q2I0M4 334 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 KHDRBS2Q5VWX1 349 aaKnown RBP4.02□□□□□ -1.77
UBR1-208ENST00000569066 RASSF6Q6ZTQ3 369 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 OR4A15Q8NGL6 344 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 NDNFQ8TB73 568 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 PHF10Q8WUB8 498 aaKnown RBP4.02□□□□□ -1.77
UBR1-208ENST00000569066 AP3S1Q92572 193 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 CCDC126Q96EE4 140 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 CCDC90BQ9GZT6 254 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 DYRK4Q9NR20 520 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 CTPS2Q9NRF8 586 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 TREX1Q9NSU2 369 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 OPN4Q9UHM6 478 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 FGD6Q6ZV73 1430 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 KDM6BO15054 1643 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 RNF17Q9BXT8 1623 aaKnown RBP4.02□□□□□ -1.77
UBR1-208ENST00000569066 LRRN3E7EW58 273 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 COPEO14579 308 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 SLC16A4O15374 487 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 AHSA1O95433 338 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 MPC2O95563 127 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 CFDP00746 253 aaPredicted RBP4.02□□□□□ -1.77
UBR1-208ENST00000569066 HIST1H1BP16401 226 aaKnown RBP4.02□□□□□ -1.77
UBR1-208ENST00000569066 RPS3P23396 243 aaKnown RBP eCLIP4.02□□□□□ -1.77
UBR1-208ENST00000569066 GPR6P46095 362 aaPredicted RBP4.02□□□□□ -1.77
UBR1-208ENST00000569066 RPS5P46782 204 aaKnown RBP4.02□□□□□ -1.77
UBR1-208ENST00000569066 EVX1P49640 407 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 RORCP51449 518 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 AP3S2P59780 193 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 FABP9Q0Z7S8 132 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 NKAIN1Q4KMZ8 207 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 PIP5KL1Q5T9C9 394 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 ULK3Q6PHR2 472 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 EIF4E3Q8N5X7 224 aaKnown RBP4.02□□□□□ -1.77
UBR1-208ENST00000569066 FBXL13Q8NEE6 735 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 OR8J3Q8NGG0 315 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 OR8D4Q8NGM9 314 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 OR2V1Q8NHB1 315 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 SLC7A13Q8TCU3 470 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 BLOC1S5Q8TDH9 187 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 SLIRPQ9GZT3 109 aaKnown RBP4.02□□□□□ -1.77
UBR1-208ENST00000569066 NXF3Q9H4D5 531 aaKnown RBP4.02□□□□□ -1.77
UBR1-208ENST00000569066 GSKIPQ9P0R6 139 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 METTL1Q9UBP6 276 aaKnown RBP4.02□□□□□ -1.77
UBR1-208ENST00000569066 ZNF282Q9UDV7 671 aaPredicted RBP4.02□□□□□ -1.77
UBR1-208ENST00000569066 TBC1D24Q9ULP9 559 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 CDH10Q9Y6N8 788 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 CDC42BPGQ6DT37 1551 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 MROH2BQ7Z745 1585 aa4.02□□□□□ -1.77
UBR1-208ENST00000569066 PRAMEF26H0Y7S4 382 aa4.01□□□□□ -1.77
UBR1-208ENST00000569066 KCNK1O00180 336 aa4.01□□□□□ -1.77
UBR1-208ENST00000569066 TCF21O43680 179 aa4.01□□□□□ -1.77
UBR1-208ENST00000569066 ALDOBP05062 364 aa4.01□□□□□ -1.77
UBR1-208ENST00000569066 EMP2P54851 167 aa4.01□□□□□ -1.77
UBR1-208ENST00000569066 RAP1AP62834 184 aa4.01□□□□□ -1.77
UBR1-208ENST00000569066 FZD2Q14332 565 aa4.01□□□□□ -1.77
UBR1-208ENST00000569066 NDUFAF6Q330K2 333 aa4.01□□□□□ -1.77
UBR1-208ENST00000569066 RNASE10Q5GAN6 216 aaKnown RBP4.01□□□□□ -1.77
UBR1-208ENST00000569066 AVPI1Q5T686 147 aa4.01□□□□□ -1.77
UBR1-208ENST00000569066 ZNF720Q7Z2F6 126 aa4.01□□□□□ -1.77
UBR1-208ENST00000569066 NAA40Q86UY6 237 aa4.01□□□□□ -1.77
UBR1-208ENST00000569066 STX19Q8N4C7 294 aa4.01□□□□□ -1.77
UBR1-208ENST00000569066 ZADH2Q8N4Q0 377 aa4.01□□□□□ -1.77
UBR1-208ENST00000569066 GDPD1Q8N9F7 314 aa4.01□□□□□ -1.77
UBR1-208ENST00000569066 CYB561A3Q8NBI2 242 aa4.01□□□□□ -1.77
UBR1-208ENST00000569066 LINC01006Q8NI28 216 aa4.01□□□□□ -1.77
UBR1-208ENST00000569066 MRGPRFQ96AM1 343 aa4.01□□□□□ -1.77
UBR1-208ENST00000569066 PRRT1Q99946 306 aa4.01□□□□□ -1.77
UBR1-208ENST00000569066 RASL11BQ9BPW5 248 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 577 ms