RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 IL24Q13007 206 aa17.59■□□□□ 0.41
SHCBP1-205ENST00000566016 ESCO2Q56NI9 601 aa17.59■□□□□ 0.41
SHCBP1-205ENST00000566016 YIF1BQ5BJH7 314 aa17.59■□□□□ 0.41
SHCBP1-205ENST00000566016 POC1AQ8NBT0 407 aa17.59■□□□□ 0.41
SHCBP1-205ENST00000566016 C19orf18Q8NEA5 215 aa17.59■□□□□ 0.41
SHCBP1-205ENST00000566016 DEFB108BQ8NET1 73 aa17.59■□□□□ 0.41
SHCBP1-205ENST00000566016 OR8B3Q8NGG8 313 aa17.59■□□□□ 0.41
SHCBP1-205ENST00000566016 OR5D14Q8NGL3 314 aa17.59■□□□□ 0.41
SHCBP1-205ENST00000566016 GHSRQ92847 366 aa17.59■□□□□ 0.41
SHCBP1-205ENST00000566016 BORCS8Q96FH0 119 aa17.59■□□□□ 0.41
SHCBP1-205ENST00000566016 OR8B2Q96RD0 313 aa17.59■□□□□ 0.41
SHCBP1-205ENST00000566016 DNTTIP1Q9H147 329 aa17.59■□□□□ 0.41
SHCBP1-205ENST00000566016 ZCCHC4Q9H5U6 513 aa17.59■□□□□ 0.41
SHCBP1-205ENST00000566016 NEK6Q9HC98 313 aa17.59■□□□□ 0.41
SHCBP1-205ENST00000566016 KAAG1Q9UBP8 84 aa17.59■□□□□ 0.41
SHCBP1-205ENST00000566016 ANK3Q12955 4377 aaKnown RBP17.59■□□□□ 0.41
SHCBP1-205ENST00000566016 FAM230AA0A1W2PPH8 454 aa17.58■□□□□ 0.41
SHCBP1-205ENST00000566016 INAFM1C9JVW0 142 aa17.58■□□□□ 0.41
SHCBP1-205ENST00000566016 AKR7A2O43488 359 aa17.58■□□□□ 0.41
SHCBP1-205ENST00000566016 PGA5P0DJD9 388 aa17.58■□□□□ 0.41
SHCBP1-205ENST00000566016 AZGP1P25311 298 aaKnown RBP17.58■□□□□ 0.41
SHCBP1-205ENST00000566016 RBP2P50120 134 aa17.58■□□□□ 0.41
SHCBP1-205ENST00000566016 SPHARQ15513 63 aa17.58■□□□□ 0.41
SHCBP1-205ENST00000566016 CALHM1Q8IU99 346 aa17.58■□□□□ 0.41
SHCBP1-205ENST00000566016 TRMT10AQ8TBZ6 339 aaKnown RBP17.58■□□□□ 0.41
SHCBP1-205ENST00000566016 NPRL2Q8WTW4 380 aa17.58■□□□□ 0.41
SHCBP1-205ENST00000566016 HIF1ANQ9NWT6 349 aa17.58■□□□□ 0.41
SHCBP1-205ENST00000566016 RASL12Q9NYN1 266 aa17.58■□□□□ 0.41
SHCBP1-205ENST00000566016 IGKV1-27A0A075B6S5 117 aa17.57■□□□□ 0.4
SHCBP1-205ENST00000566016 KIAA1324LA8MWY0 1029 aaPredicted RBP17.57■□□□□ 0.4
SHCBP1-205ENST00000566016 GATA3P23771 443 aa17.57■□□□□ 0.4
SHCBP1-205ENST00000566016 NPY4RP50391 375 aa17.57■□□□□ 0.4
SHCBP1-205ENST00000566016 GABARAPL2P60520 117 aa17.57■□□□□ 0.4
SHCBP1-205ENST00000566016 SEC61A1P61619 476 aaKnown RBP17.57■□□□□ 0.4
SHCBP1-205ENST00000566016 DOC2BQ14184 412 aa17.57■□□□□ 0.4
SHCBP1-205ENST00000566016 STUMQ69YW2 141 aa17.57■□□□□ 0.4
SHCBP1-205ENST00000566016 ZNF529Q6P280 563 aa17.57■□□□□ 0.4
SHCBP1-205ENST00000566016 LHFPL2Q6ZUX7 228 aa17.57■□□□□ 0.4
SHCBP1-205ENST00000566016 OR13C9Q8NGT0 318 aa17.57■□□□□ 0.4
SHCBP1-205ENST00000566016 TMEM106AQ96A25 262 aa17.57■□□□□ 0.4
SHCBP1-205ENST00000566016 OPALINQ96PE5 141 aa17.57■□□□□ 0.4
SHCBP1-205ENST00000566016 NRIP2Q9BQI9 281 aa17.57■□□□□ 0.4
SHCBP1-205ENST00000566016 SSBP3Q9BWW4 388 aaPredicted RBP17.57■□□□□ 0.4
SHCBP1-205ENST00000566016 WDR13Q9H1Z4 485 aa17.57■□□□□ 0.4
SHCBP1-205ENST00000566016 LPAR2Q9HBW0 351 aa17.57■□□□□ 0.4
SHCBP1-205ENST00000566016 TRBV5-5A0A0J9YX44 114 aa17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 SULT1B1O43704 296 aa17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 MRPS14O60783 128 aaKnown RBP17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 OCM2P0CE71 109 aa17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 CELP19835 753 aa17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 GLRA1P23415 457 aa17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 PITPNBP48739 271 aa17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 ATP1B3P54709 279 aa17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 RPS11P62280 158 aaKnown RBP eCLIP17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 SMIM21Q3B7S5 101 aa17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 ATPAF1Q5TC12 328 aaPredicted RBP17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 ZFP41Q8N8Y5 198 aa17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 THRSPQ92748 146 aa17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 DNAJB11Q9UBS4 358 aa17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 CDC42EP3Q9UKI2 254 aa17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 A0A0G2JMP0 313 aa17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 A0A0X1KG70 313 aa17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 ADAM20O43506 726 aa17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 SYNGR1O43759 233 aa17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 GYPAP02724 150 aa17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 ZFP36P26651 326 aaKnown RBP17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 GNB2P62879 340 aa17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 LCN2P80188 198 aa17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 TBCEQ15813 527 aaPredicted RBP17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 C11orf91Q3C1V1 193 aa17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 Q499Y3 187 aa17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 LYPD2Q6UXB3 125 aa17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 ZNF841Q6ZN19 808 aa17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 ANGPTL5Q86XS5 388 aa17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 OR4M2Q8NGB6 313 aa17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 OR5M11Q96RB7 305 aa17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 YTHDF1Q9BYJ9 559 aaKnown RBP17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 HES4Q9HCC6 221 aa17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 NLKQ9UBE8 527 aa17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 CTSZQ9UBR2 303 aa17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 LPAR3Q9UBY5 353 aa17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 CLN8Q9UBY8 286 aa17.56■□□□□ 0.4
SHCBP1-205ENST00000566016 IGHV3OR15-7A0A075B7D8 119 aa17.55■□□□□ 0.4
SHCBP1-205ENST00000566016 OCMP0CE72 109 aaPredicted RBP17.55■□□□□ 0.4
SHCBP1-205ENST00000566016 SOX2P48431 317 aa17.55■□□□□ 0.4
SHCBP1-205ENST00000566016 MTCP1P56278 107 aa17.55■□□□□ 0.4
SHCBP1-205ENST00000566016 ERVK11-1P61568 191 aa17.55■□□□□ 0.4
SHCBP1-205ENST00000566016 GPR50Q13585 617 aa17.55■□□□□ 0.4
SHCBP1-205ENST00000566016 MED22Q15528 200 aa17.55■□□□□ 0.4
SHCBP1-205ENST00000566016 WDR25Q64LD2 544 aaPredicted RBP17.55■□□□□ 0.4
SHCBP1-205ENST00000566016 ASPHD2Q6ICH7 369 aa17.55■□□□□ 0.4
SHCBP1-205ENST00000566016 SLC36A1Q7Z2H8 476 aa17.55■□□□□ 0.4
SHCBP1-205ENST00000566016 TMIGD2Q96BF3 282 aa17.55■□□□□ 0.4
SHCBP1-205ENST00000566016 SEH1LQ96EE3 360 aa17.55■□□□□ 0.4
SHCBP1-205ENST00000566016 CPNE2Q96FN4 548 aaPredicted RBP17.55■□□□□ 0.4
SHCBP1-205ENST00000566016 ISYNA1Q9NPH2 558 aa17.55■□□□□ 0.4
SHCBP1-205ENST00000566016 OR5V1Q9UGF6 321 aa17.55■□□□□ 0.4
SHCBP1-205ENST00000566016 OR2AT4A6NND4 320 aa17.54■□□□□ 0.4
SHCBP1-205ENST00000566016 J3QLI3 93 aa17.54■□□□□ 0.4
SHCBP1-205ENST00000566016 TMPRSS2O15393 492 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms