RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 ALX3O95076 343 aa13.94□□□□□ -0.18
CLK3-207ENST00000562389 MT-ND2P03891 347 aa13.94□□□□□ -0.18
CLK3-207ENST00000562389 PGA5P0DJD9 388 aa13.94□□□□□ -0.18
CLK3-207ENST00000562389 PRKACBP22694 351 aa13.94□□□□□ -0.18
CLK3-207ENST00000562389 GLRA1P23415 457 aa13.94□□□□□ -0.18
CLK3-207ENST00000562389 AZGP1P25311 298 aaKnown RBP13.94□□□□□ -0.18
CLK3-207ENST00000562389 PITPNBP48739 271 aa13.94□□□□□ -0.18
CLK3-207ENST00000562389 NPY4RP50391 375 aa13.94□□□□□ -0.18
CLK3-207ENST00000562389 RIPPLY3P57055 190 aa13.94□□□□□ -0.18
CLK3-207ENST00000562389 GNB2P62879 340 aa13.94□□□□□ -0.18
CLK3-207ENST00000562389 BDH1Q02338 343 aa13.94□□□□□ -0.18
CLK3-207ENST00000562389 ACSM1Q08AH1 577 aa13.94□□□□□ -0.18
CLK3-207ENST00000562389 IL24Q13007 206 aa13.94□□□□□ -0.18
CLK3-207ENST00000562389 IRF3Q14653 427 aa13.94□□□□□ -0.18
CLK3-207ENST00000562389 CR1LQ2VPA4 569 aa13.94□□□□□ -0.18
CLK3-207ENST00000562389 ZNF841Q6ZN19 808 aa13.94□□□□□ -0.18
CLK3-207ENST00000562389 LHFPL2Q6ZUX7 228 aa13.94□□□□□ -0.18
CLK3-207ENST00000562389 CALHM1Q8IU99 346 aa13.94□□□□□ -0.18
CLK3-207ENST00000562389 SERPINA12Q8IW75 414 aa13.94□□□□□ -0.18
CLK3-207ENST00000562389 SEH1LQ96EE3 360 aa13.94□□□□□ -0.18
CLK3-207ENST00000562389 PGLYRP3Q96LB9 341 aa13.94□□□□□ -0.18
CLK3-207ENST00000562389 WDR13Q9H1Z4 485 aa13.94□□□□□ -0.18
CLK3-207ENST00000562389 ZCCHC4Q9H5U6 513 aa13.94□□□□□ -0.18
CLK3-207ENST00000562389 RASL12Q9NYN1 266 aa13.94□□□□□ -0.18
CLK3-207ENST00000562389 DNAJB11Q9UBS4 358 aa13.94□□□□□ -0.18
CLK3-207ENST00000562389 CDC42EP3Q9UKI2 254 aa13.94□□□□□ -0.18
CLK3-207ENST00000562389 ARHGAP32A7KAX9 2087 aa13.94□□□□□ -0.18
CLK3-207ENST00000562389 A0A0G2JMP0 313 aa13.93□□□□□ -0.18
CLK3-207ENST00000562389 A0A0X1KG70 313 aa13.93□□□□□ -0.18
CLK3-207ENST00000562389 ADAM20O43506 726 aa13.93□□□□□ -0.18
CLK3-207ENST00000562389 RGS10O43665 173 aa13.93□□□□□ -0.18
CLK3-207ENST00000562389 CD1AP06126 327 aa13.93□□□□□ -0.18
CLK3-207ENST00000562389 ACAA1P09110 424 aaPredicted RBP13.93□□□□□ -0.18
CLK3-207ENST00000562389 HOXB4P17483 251 aaPredicted RBP13.93□□□□□ -0.18
CLK3-207ENST00000562389 GATA3P23771 443 aa13.93□□□□□ -0.18
CLK3-207ENST00000562389 RBP2P50120 134 aa13.93□□□□□ -0.18
CLK3-207ENST00000562389 ATP1B3P54709 279 aa13.93□□□□□ -0.18
CLK3-207ENST00000562389 DOC2BQ14184 412 aa13.93□□□□□ -0.18
CLK3-207ENST00000562389 YIF1BQ5BJH7 314 aa13.93□□□□□ -0.18
CLK3-207ENST00000562389 FAM120AOSQ5T036 256 aa13.93□□□□□ -0.18
CLK3-207ENST00000562389 ATPAF1Q5TC12 328 aaPredicted RBP13.93□□□□□ -0.18
CLK3-207ENST00000562389 STUMQ69YW2 141 aa13.93□□□□□ -0.18
CLK3-207ENST00000562389 ANGPTL5Q86XS5 388 aa13.93□□□□□ -0.18
CLK3-207ENST00000562389 ZFP41Q8N8Y5 198 aa13.93□□□□□ -0.18
CLK3-207ENST00000562389 OR4M2Q8NGB6 313 aa13.93□□□□□ -0.18
CLK3-207ENST00000562389 OR5D14Q8NGL3 314 aa13.93□□□□□ -0.18
CLK3-207ENST00000562389 OR13C9Q8NGT0 318 aa13.93□□□□□ -0.18
CLK3-207ENST00000562389 GHSRQ92847 366 aa13.93□□□□□ -0.18
CLK3-207ENST00000562389 OPALINQ96PE5 141 aa13.93□□□□□ -0.18
CLK3-207ENST00000562389 SHARPINQ9H0F6 387 aa13.93□□□□□ -0.18
CLK3-207ENST00000562389 DNTTIP1Q9H147 329 aa13.93□□□□□ -0.18
CLK3-207ENST00000562389 RASSF4Q9H2L5 321 aa13.93□□□□□ -0.18
CLK3-207ENST00000562389 NLKQ9UBE8 527 aa13.93□□□□□ -0.18
CLK3-207ENST00000562389 CLN8Q9UBY8 286 aa13.93□□□□□ -0.18
CLK3-207ENST00000562389 BLOC1S6Q9UL45 172 aa13.93□□□□□ -0.18
CLK3-207ENST00000562389 LSM2Q9Y333 95 aaKnown RBP13.93□□□□□ -0.18
CLK3-207ENST00000562389 ANK3Q12955 4377 aaKnown RBP13.92□□□□□ -0.18
CLK3-207ENST00000562389 SONP18583 2426 aaKnown RBP13.92□□□□□ -0.18
CLK3-207ENST00000562389 TRBV5-5A0A0J9YX44 114 aa13.92□□□□□ -0.18
CLK3-207ENST00000562389 J3QLI3 93 aa13.92□□□□□ -0.18
CLK3-207ENST00000562389 PHF1O43189 567 aaPredicted RBP13.92□□□□□ -0.18
CLK3-207ENST00000562389 SULT1B1O43704 296 aa13.92□□□□□ -0.18
CLK3-207ENST00000562389 CD2P06729 351 aa13.92□□□□□ -0.18
CLK3-207ENST00000562389 OCM2P0CE71 109 aa13.92□□□□□ -0.18
CLK3-207ENST00000562389 HNF1AP20823 631 aa13.92□□□□□ -0.18
CLK3-207ENST00000562389 GMFBP60983 142 aa13.92□□□□□ -0.18
CLK3-207ENST00000562389 CHRFAM7AQ494W8 412 aa13.92□□□□□ -0.18
CLK3-207ENST00000562389 WDR25Q64LD2 544 aaPredicted RBP13.92□□□□□ -0.18
CLK3-207ENST00000562389 PRSS48Q7RTY5 328 aa13.92□□□□□ -0.18
CLK3-207ENST00000562389 SLC36A1Q7Z2H8 476 aa13.92□□□□□ -0.18
CLK3-207ENST00000562389 TMIGD2Q96BF3 282 aa13.92□□□□□ -0.18
CLK3-207ENST00000562389 NRIP2Q9BQI9 281 aa13.92□□□□□ -0.18
CLK3-207ENST00000562389 NEK6Q9HC98 313 aa13.92□□□□□ -0.18
CLK3-207ENST00000562389 OR5V1Q9UGF6 321 aa13.92□□□□□ -0.18
CLK3-207ENST00000562389 TRAPPC2LH3BP13 241 aa13.91□□□□□ -0.18
CLK3-207ENST00000562389 TMPRSS2O15393 492 aa13.91□□□□□ -0.18
CLK3-207ENST00000562389 OCMP0CE72 109 aaPredicted RBP13.91□□□□□ -0.18
CLK3-207ENST00000562389 CELP19835 753 aa13.91□□□□□ -0.18
CLK3-207ENST00000562389 SOX2P48431 317 aa13.91□□□□□ -0.18
CLK3-207ENST00000562389 MTCP1P56278 107 aa13.91□□□□□ -0.18
CLK3-207ENST00000562389 ERVK11-1P61568 191 aa13.91□□□□□ -0.18
CLK3-207ENST00000562389 RPS11P62280 158 aaKnown RBP eCLIP13.91□□□□□ -0.18
CLK3-207ENST00000562389 PAX2Q02962 417 aa13.91□□□□□ -0.18
CLK3-207ENST00000562389 SPHARQ15513 63 aa13.91□□□□□ -0.18
CLK3-207ENST00000562389 SMIM21Q3B7S5 101 aa13.91□□□□□ -0.18
CLK3-207ENST00000562389 DCAF12L2Q5VW00 463 aa13.91□□□□□ -0.18
CLK3-207ENST00000562389 ZNF529Q6P280 563 aa13.91□□□□□ -0.18
CLK3-207ENST00000562389 ACP7Q6ZNF0 438 aa13.91□□□□□ -0.18
CLK3-207ENST00000562389 OR13C5Q8NGS8 318 aa13.91□□□□□ -0.18
CLK3-207ENST00000562389 ANGPTL6Q8NI99 470 aa13.91□□□□□ -0.18
CLK3-207ENST00000562389 TMEM106AQ96A25 262 aa13.91□□□□□ -0.18
CLK3-207ENST00000562389 ZNF488Q96MN9 340 aa13.91□□□□□ -0.18
CLK3-207ENST00000562389 OR5M11Q96RB7 305 aa13.91□□□□□ -0.18
CLK3-207ENST00000562389 BEX2Q9BXY8 128 aa13.91□□□□□ -0.18
CLK3-207ENST00000562389 HES4Q9HCC6 221 aa13.91□□□□□ -0.18
CLK3-207ENST00000562389 SNTG1Q9NSN8 517 aa13.91□□□□□ -0.18
CLK3-207ENST00000562389 PNMA8CA0A1B0GUJ8 204 aa13.9□□□□□ -0.18
CLK3-207ENST00000562389 NKX6-3A6NJ46 265 aa13.9□□□□□ -0.18
CLK3-207ENST00000562389 OR2AT4A6NND4 320 aa13.9□□□□□ -0.18
CLK3-207ENST00000562389 AMY2BP19961 511 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms