RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 TMUB1Q9BVT8 246 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 SSBP3Q9BWW4 388 aaPredicted RBP9.02□□□□□ -0.97
TPM1-229ENST00000561242 BEX2Q9BXY8 128 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 PATZ1Q9HBE1 687 aaKnown RBP9.02□□□□□ -0.97
TPM1-229ENST00000561242 RHOFQ9HBH0 211 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 TAS2R4Q9NYW5 299 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 LPAR3Q9UBY5 353 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 OR14J1Q9UGF5 321 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 FOXJ3Q9UPW0 622 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 TENM4Q6N022 2769 aa9.02□□□□□ -0.97
TPM1-229ENST00000561242 HEATR1Q9H583 2144 aaKnown RBP9.02□□□□□ -0.97
TPM1-229ENST00000561242 LOC105371242A0A075B767 164 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 IGHV4-61A0A0C4DH41 118 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 A0A1B0GWJ7 208 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 A0A1W2PPK0 400 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 PQLC2LA1A4F0 135 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 VWC2LB2RUY7 222 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 CD5LO43866 347 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 NOL3O60936 208 aaKnown RBP9.01□□□□□ -0.97
TPM1-229ENST00000561242 ALX3O95076 343 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 FSTL3O95633 263 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 ECDO95905 644 aaPredicted RBP9.01□□□□□ -0.97
TPM1-229ENST00000561242 IGHV2-70P01814 119 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 ALDOBP05062 364 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 LIPFP07098 398 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 MSMBP08118 114 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 CHRM2P08172 466 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 CFHR2P36980 270 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 IL13RA1P78552 427 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 CACNA1DQ01668 2161 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 SCN1BQ07699 218 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 ZMYND11Q15326 602 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 KISS1Q15726 138 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 UBE2V2Q15819 145 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 NEDD8Q15843 81 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 FAM189A2Q15884 450 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 DMRTC1Q5HYR2 192 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 TMEM42Q69YG0 159 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 WDR82Q6UXN9 313 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 FAM90A1Q86YD7 464 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 TMEM185AQ8NFB2 350 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 OR51A4Q8NGJ6 313 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 OR5D13Q8NGL4 314 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 ST8SIA4Q92187 359 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 AQP3Q92482 292 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 SLAMF9Q96A28 289 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 OR14A2Q96R54 314 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 OR5M11Q96RB7 305 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 DNTTIP1Q9H147 329 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 METTL17Q9H7H0 456 aaPredicted RBP9.01□□□□□ -0.97
TPM1-229ENST00000561242 PLGRKTQ9HBL7 147 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 TMEM165Q9HC07 324 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 SNTG1Q9NSN8 517 aa9.01□□□□□ -0.97
TPM1-229ENST00000561242 HECTD1Q9ULT8 2610 aa9□□□□□ -0.97
TPM1-229ENST00000561242 IGHV3OR15-7A0A075B7D8 119 aa9□□□□□ -0.97
TPM1-229ENST00000561242 A0A1W2PQ09 198 aa9□□□□□ -0.97
TPM1-229ENST00000561242 OR2AT4A6NND4 320 aa9□□□□□ -0.97
TPM1-229ENST00000561242 CEACAM18A8MTB9 384 aa9□□□□□ -0.97
TPM1-229ENST00000561242 HTR3BO95264 441 aa9□□□□□ -0.97
TPM1-229ENST00000561242 PTBP3O95758 552 aaKnown RBP9□□□□□ -0.97
TPM1-229ENST00000561242 IFNA2P01563 188 aa9□□□□□ -0.97
TPM1-229ENST00000561242 CPEP16870 476 aa9□□□□□ -0.97
TPM1-229ENST00000561242 PRKACAP17612 351 aa9□□□□□ -0.97
TPM1-229ENST00000561242 GABRR1P24046 479 aa9□□□□□ -0.97
TPM1-229ENST00000561242 GABRA5P31644 462 aa9□□□□□ -0.97
TPM1-229ENST00000561242 PRDX2P32119 198 aa9□□□□□ -0.97
TPM1-229ENST00000561242 LCN2P80188 198 aa9□□□□□ -0.97
TPM1-229ENST00000561242 EMX1Q04741 257 aaPredicted RBP9□□□□□ -0.97
TPM1-229ENST00000561242 PDZK1IP1Q13113 114 aa9□□□□□ -0.97
TPM1-229ENST00000561242 IKZF1Q13422 519 aa9□□□□□ -0.97
TPM1-229ENST00000561242 ZNF404Q494X3 552 aa9□□□□□ -0.97
TPM1-229ENST00000561242 FAM76BQ5HYJ3 339 aa9□□□□□ -0.97
TPM1-229ENST00000561242 CDH26Q8IXH8 852 aa9□□□□□ -0.97
TPM1-229ENST00000561242 SAXO1Q8IYX7 474 aa9□□□□□ -0.97
TPM1-229ENST00000561242 SPARTQ8N0X7 666 aa9□□□□□ -0.97
TPM1-229ENST00000561242 FAM58AQ8N1B3 248 aa9□□□□□ -0.97
TPM1-229ENST00000561242 ASCC1Q8N9N2 400 aaKnown RBP9□□□□□ -0.97
TPM1-229ENST00000561242 POC1AQ8NBT0 407 aa9□□□□□ -0.97
TPM1-229ENST00000561242 OR5T2Q8NGG2 359 aa9□□□□□ -0.97
TPM1-229ENST00000561242 HPSE2Q8WWQ2 592 aa9□□□□□ -0.97
TPM1-229ENST00000561242 RFT1Q96AA3 541 aa9□□□□□ -0.97
TPM1-229ENST00000561242 TMEM186Q96B77 213 aa9□□□□□ -0.97
TPM1-229ENST00000561242 TMEM246Q9BRR3 403 aa9□□□□□ -0.97
TPM1-229ENST00000561242 NOX4Q9NPH5 578 aa9□□□□□ -0.97
TPM1-229ENST00000561242 FLNCQ14315 2725 aa9□□□□□ -0.97
TPM1-229ENST00000561242 DSCAMO60469 2012 aa8.99□□□□□ -0.97
TPM1-229ENST00000561242 CYSRT1A8MQ03 144 aa8.99□□□□□ -0.97
TPM1-229ENST00000561242 SRRM5B3KS81 715 aa8.99□□□□□ -0.97
TPM1-229ENST00000561242 J3QLI3 93 aa8.99□□□□□ -0.97
TPM1-229ENST00000561242 DEGS1O15121 323 aa8.99□□□□□ -0.97
TPM1-229ENST00000561242 ENSAO43768 121 aaKnown RBP8.99□□□□□ -0.97
TPM1-229ENST00000561242 KNG1P01042 644 aa8.99□□□□□ -0.97
TPM1-229ENST00000561242 IGHV2-5P01817 119 aa8.99□□□□□ -0.97
TPM1-229ENST00000561242 ZNF44P15621 663 aa8.99□□□□□ -0.97
TPM1-229ENST00000561242 SRMP19623 302 aa8.99□□□□□ -0.97
TPM1-229ENST00000561242 PMELP40967 661 aa8.99□□□□□ -0.97
TPM1-229ENST00000561242 DVL1P1P54792 670 aaPredicted RBP8.99□□□□□ -0.97
TPM1-229ENST00000561242 SNU13P55769 128 aaKnown RBP8.99□□□□□ -0.97
TPM1-229ENST00000561242 TPBGQ13641 420 aa8.99□□□□□ -0.97
TPM1-229ENST00000561242 C11orf91Q3C1V1 193 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms