RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 PRKACBP22694 351 aa7.05□□□□□ -1.28
TPM1-213ENST00000558400 RBMXP38159 391 aaKnown RBP7.05□□□□□ -1.28
TPM1-213ENST00000558400 ATP1B3P54709 279 aa7.05□□□□□ -1.28
TPM1-213ENST00000558400 IL13RA1P78552 427 aa7.05□□□□□ -1.28
TPM1-213ENST00000558400 HNRNPA0Q13151 305 aaKnown RBP7.05□□□□□ -1.28
TPM1-213ENST00000558400 SMIM21Q3B7S5 101 aa7.05□□□□□ -1.28
TPM1-213ENST00000558400 ARMCX4Q5H9R4 360 aa7.05□□□□□ -1.28
TPM1-213ENST00000558400 RPL22L1Q6P5R6 122 aaKnown RBP7.05□□□□□ -1.28
TPM1-213ENST00000558400 RBMS3Q6XE24 437 aaKnown RBP7.05□□□□□ -1.28
TPM1-213ENST00000558400 UTS2BQ765I0 119 aa7.05□□□□□ -1.28
TPM1-213ENST00000558400 RDH10Q8IZV5 341 aa7.05□□□□□ -1.28
TPM1-213ENST00000558400 ZNF676Q8N7Q3 588 aa7.05□□□□□ -1.28
TPM1-213ENST00000558400 OR5D14Q8NGL3 314 aa7.05□□□□□ -1.28
TPM1-213ENST00000558400 OR5AK2Q8NH90 309 aa7.05□□□□□ -1.28
TPM1-213ENST00000558400 ANGPTL6Q8NI99 470 aa7.05□□□□□ -1.28
TPM1-213ENST00000558400 APH1BQ8WW43 257 aa7.05□□□□□ -1.28
TPM1-213ENST00000558400 DACT3Q96B18 629 aaPredicted RBP7.05□□□□□ -1.28
TPM1-213ENST00000558400 BORCS8Q96FH0 119 aa7.05□□□□□ -1.28
TPM1-213ENST00000558400 TMEM80Q96HE8 168 aa7.05□□□□□ -1.28
TPM1-213ENST00000558400 CCL13Q99616 98 aa7.05□□□□□ -1.28
TPM1-213ENST00000558400 SUCNR1Q9BXA5 334 aa7.05□□□□□ -1.28
TPM1-213ENST00000558400 CHST5Q9GZS9 411 aa7.05□□□□□ -1.28
TPM1-213ENST00000558400 COMMD4Q9H0A8 199 aa7.05□□□□□ -1.28
TPM1-213ENST00000558400 CNTD2Q9H8S5 307 aa7.05□□□□□ -1.28
TPM1-213ENST00000558400 GPR173Q9NS66 373 aa7.05□□□□□ -1.28
TPM1-213ENST00000558400 NLKQ9UBE8 527 aa7.05□□□□□ -1.28
TPM1-213ENST00000558400 OPN4Q9UHM6 478 aa7.05□□□□□ -1.28
TPM1-213ENST00000558400 NUP50Q9UKX7 468 aa7.05□□□□□ -1.28
TPM1-213ENST00000558400 DIMT1Q9UNQ2 313 aaKnown RBP7.05□□□□□ -1.28
TPM1-213ENST00000558400 EXOSC1Q9Y3B2 195 aaKnown RBP7.05□□□□□ -1.28
TPM1-213ENST00000558400 ANK3Q12955 4377 aaKnown RBP7.04□□□□□ -1.28
TPM1-213ENST00000558400 DOCK11Q5JSL3 2073 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 IGHV3OR15-7A0A075B7D8 119 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 TRBV2A0A0J9YWF9 115 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 LOC107986453A0A1B0GWG9 222 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 FAM230AA0A1W2PPH8 454 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 EFCAB10A6NFE3 127 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 OR4C45A6NMZ5 311 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 ZNF879B4DU55 563 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 H0YHG0 523 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.04□□□□□ -1.28
TPM1-213ENST00000558400 RHBDL1O75783 438 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 CLIC3O95833 236 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 CYB5AP00167 134 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 PGA5P0DJD9 388 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 ZNF20P17024 532 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 EGR1P18146 543 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 MPZP25189 248 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 KIR3DL2P43630 455 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 RBP2P50120 134 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 CAV3P56539 151 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 NANOS3P60323 173 aaKnown RBP7.04□□□□□ -1.28
TPM1-213ENST00000558400 IL24Q13007 206 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 UBE2V2Q15819 145 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 STUMQ69YW2 141 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 ZNF788Q6ZQV5 615 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 C1orf122Q6ZSJ8 110 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 BTN2A1Q7KYR7 527 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 SERPINA12Q8IW75 414 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 MKXQ8IYA7 352 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 Q8IYB0 196 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 BPIFB2Q8N4F0 458 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 POC1AQ8NBT0 407 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 OR5T2Q8NGG2 359 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 CNIH3Q8TBE1 160 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 TBC1D15Q8TC07 691 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 ZFAND2BQ8WV99 257 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 TFAP2CQ92754 450 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 SPSB1Q96BD6 273 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 UPRTQ96BW1 309 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 FGGYQ96C11 551 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 ZNF649Q9BS31 505 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 FGF23Q9GZV9 251 aaPredicted RBP7.04□□□□□ -1.28
TPM1-213ENST00000558400 WDR13Q9H1Z4 485 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 PLCXD1Q9NUJ7 323 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 BABAM2Q9NXR7 383 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 CNOT2Q9NZN8 540 aaKnown RBP7.04□□□□□ -1.28
TPM1-213ENST00000558400 CTSZQ9UBR2 303 aa7.04□□□□□ -1.28
TPM1-213ENST00000558400 RRP15Q9Y3B9 282 aaKnown RBP7.04□□□□□ -1.28
TPM1-213ENST00000558400 A6NIN4 97 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 SLC1A7O00341 560 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 SIGLEC5O15389 551 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 NXPH2O95156 264 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 ZFPL1O95159 310 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 FSHBP01225 129 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 MT-ND2P03891 347 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 CD2P06729 351 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 LIMS3P0CW19 117 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 LIMS4P0CW20 117 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 PSG2P11465 335 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 PIPP12273 146 aaPredicted RBP7.03□□□□□ -1.28
TPM1-213ENST00000558400 ATF1P18846 271 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 PRDX2P32119 198 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 GABRA2P47869 451 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 MTCP1P56278 107 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 GMFBP60983 142 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 ST3GAL4Q11206 333 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 PDCD1Q15116 288 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 SMN1Q16637 294 aaKnown RBP7.03□□□□□ -1.28
TPM1-213ENST00000558400 DMRTC1Q5HYR2 192 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms