RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 MRPL48Q96GC5 212 aaKnown RBP3.9□□□□□ -1.79
ATXN3-231ENST00000554994 OR8B4Q96RC9 309 aa3.9□□□□□ -1.79
ATXN3-231ENST00000554994 SIGLEC11Q96RL6 698 aa3.9□□□□□ -1.79
ATXN3-231ENST00000554994 MNTQ99583 582 aa3.9□□□□□ -1.79
ATXN3-231ENST00000554994 MICU1Q9BPX6 476 aa3.9□□□□□ -1.79
ATXN3-231ENST00000554994 SLC30A2Q9BRI3 323 aa3.9□□□□□ -1.79
ATXN3-231ENST00000554994 SOX7Q9BT81 388 aa3.9□□□□□ -1.79
ATXN3-231ENST00000554994 ADAT1Q9BUB4 502 aaKnown RBP3.9□□□□□ -1.79
ATXN3-231ENST00000554994 SLC22A4Q9H015 551 aa3.9□□□□□ -1.79
ATXN3-231ENST00000554994 METTL17Q9H7H0 456 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-231ENST00000554994 PPP1R3EQ9H7J1 279 aa3.9□□□□□ -1.79
ATXN3-231ENST00000554994 FN3KRPQ9HA64 309 aa3.9□□□□□ -1.79
ATXN3-231ENST00000554994 GPR84Q9NQS5 396 aa3.9□□□□□ -1.79
ATXN3-231ENST00000554994 GPR173Q9NS66 373 aa3.9□□□□□ -1.79
ATXN3-231ENST00000554994 DDX28Q9NUL7 540 aaKnown RBP3.9□□□□□ -1.79
ATXN3-231ENST00000554994 TMEM106BQ9NUM4 274 aa3.9□□□□□ -1.79
ATXN3-231ENST00000554994 CHCHD3Q9NX63 227 aaKnown RBP3.9□□□□□ -1.79
ATXN3-231ENST00000554994 DCAF16Q9NXF7 216 aa3.9□□□□□ -1.79
ATXN3-231ENST00000554994 GAR1Q9NY12 217 aaKnown RBP3.9□□□□□ -1.79
ATXN3-231ENST00000554994 ZNF319Q9P2F9 582 aa3.9□□□□□ -1.79
ATXN3-231ENST00000554994 RNF7Q9UBF6 113 aa3.9□□□□□ -1.79
ATXN3-231ENST00000554994 NKX1-2Q9UD57 310 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-231ENST00000554994 OR52A1Q9UKL2 312 aa3.9□□□□□ -1.79
ATXN3-231ENST00000554994 SLC22A13Q9Y226 551 aa3.9□□□□□ -1.79
ATXN3-231ENST00000554994 NOP16Q9Y3C1 178 aaKnown RBP3.9□□□□□ -1.79
ATXN3-231ENST00000554994 RHBDD3Q9Y3P4 386 aa3.9□□□□□ -1.79
ATXN3-231ENST00000554994 RPL36Q9Y3U8 105 aaKnown RBP3.9□□□□□ -1.79
ATXN3-231ENST00000554994 WIPI2Q9Y4P8 454 aa3.9□□□□□ -1.79
ATXN3-231ENST00000554994 PPIAL4AQ9Y536 164 aa3.9□□□□□ -1.79
ATXN3-231ENST00000554994 SNX5Q9Y5X3 404 aa3.9□□□□□ -1.79
ATXN3-231ENST00000554994 NPTNQ9Y639 398 aa3.9□□□□□ -1.79
ATXN3-231ENST00000554994 HERC2O95714 4834 aa3.9□□□□□ -1.79
ATXN3-231ENST00000554994 TENM2Q9NT68 2774 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 ACOD1A6NK06 481 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 PRR32B1ATL7 298 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 B4DSR2 109 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 ZNF732B4DXR9 585 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 PTGES3LE9PB15 166 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 TMEM178BH3BS89 294 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 SYT7O43581 403 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 PLPP2O43688 288 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 FADS2O95864 444 aaKnown RBP3.89□□□□□ -1.79
ATXN3-231ENST00000554994 PNPP00491 289 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 SERPINA3P01011 423 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 NRASP01111 189 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 GYPAP02724 150 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 CD55P08174 381 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 DBTP11182 482 aaKnown RBP3.89□□□□□ -1.79
ATXN3-231ENST00000554994 RPS2P15880 293 aaKnown RBP3.89□□□□□ -1.79
ATXN3-231ENST00000554994 CD80P33681 288 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 PMELP40967 661 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 GABRA2P47869 451 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 GPM6AP51674 278 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 GBX2P52951 348 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-231ENST00000554994 OR12D2P58182 307 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 ACTC1P68032 377 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 ACTA1P68133 377 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 ZNF85Q03923 595 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 MFGE8Q08431 387 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-231ENST00000554994 MAB21L1Q13394 359 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 TMED1Q13445 227 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 MED21Q13503 144 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 KRTAP27-1Q3LI81 207 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 ZNF684Q5T5D7 378 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 PLCXD3Q63HM9 321 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 DEGS2Q6QHC5 323 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 LYPD2Q6UXB3 125 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 RHOUQ7L0Q8 258 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 SATL1Q86VE3 508 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 ZDHHC23Q8IYP9 409 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 ENTHD1Q8IYW4 607 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 RDH10Q8IZV5 341 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 C8orf59Q8N0T1 100 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-231ENST00000554994 BATF2Q8N1L9 274 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 STX19Q8N4C7 294 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 ACBD7Q8N6N7 88 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 ZNF676Q8N7Q3 588 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 SPERTQ8NA61 448 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 CLRN3Q8NCR9 226 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 SETD9Q8NE22 299 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 BPIFB6Q8NFQ5 453 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 OR52I1Q8NGK6 324 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 RHOXF1Q8NHV9 184 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 FAM216AQ8WUB2 273 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 LRRC29Q8WV35 223 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 RPL3LQ92901 407 aaKnown RBP3.89□□□□□ -1.79
ATXN3-231ENST00000554994 RAB39BQ96DA2 213 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 LGALS12Q96DT0 336 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 LYZL4Q96KX0 146 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 C4orf36Q96KX1 117 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 ALG8Q9BVK2 526 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 RTL8AQ9BWD3 113 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 ZNF665Q9H7R5 613 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 PLEKHA1Q9HB21 404 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 SNTG1Q9NSN8 517 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 HAO2Q9NYQ3 351 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 MRPL15Q9P015 296 aaKnown RBP3.89□□□□□ -1.79
ATXN3-231ENST00000554994 DNAJB11Q9UBS4 358 aa3.89□□□□□ -1.79
ATXN3-231ENST00000554994 MRM2Q9UI43 246 aaKnown RBP3.89□□□□□ -1.79
ATXN3-231ENST00000554994 SLC7A11Q9UPY5 501 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms