RNA–Protein interactions for RNA: ENST00000554570.1

KTN1-216, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-216ENST00000554570 TSGA10Q9BZW7 698 aa2.07□□□□□ -2.08
KTN1-216ENST00000554570 KIR3DX1Q9H7L2 352 aa2.07□□□□□ -2.08
KTN1-216ENST00000554570 LRRC40Q9H9A6 602 aa2.07□□□□□ -2.08
KTN1-216ENST00000554570 UCK1Q9HA47 277 aa2.07□□□□□ -2.08
KTN1-216ENST00000554570 RAB18Q9NP72 206 aa2.07□□□□□ -2.08
KTN1-216ENST00000554570 NLE1Q9NVX2 485 aaPredicted RBP2.07□□□□□ -2.08
KTN1-216ENST00000554570 BFARQ9NZS9 450 aa2.07□□□□□ -2.08
KTN1-216ENST00000554570 DHCR7Q9UBM7 475 aaKnown RBP2.07□□□□□ -2.08
KTN1-216ENST00000554570 KCNIP3Q9Y2W7 256 aa2.07□□□□□ -2.08
KTN1-216ENST00000554570 AHCTF1Q8WYP5 2266 aa2.07□□□□□ -2.08
KTN1-216ENST00000554570 CCDC88CQ9P219 2028 aa2.07□□□□□ -2.08
KTN1-216ENST00000554570 CSMD1Q96PZ7 3565 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 MAST4O15021 2626 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 A0A0J9YY10 115 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 HEATR9A2RTY3 570 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 BTNL10A8MVZ5 291 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 C21orf140B9A014 251 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 LIN7AO14910 233 aaPredicted RBP2.06□□□□□ -2.08
KTN1-216ENST00000554570 PFDN6O15212 129 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 TOX3O15405 576 aaPredicted RBP2.06□□□□□ -2.08
KTN1-216ENST00000554570 RBFOX2O43251 390 aaKnown RBP eCLIP2.06□□□□□ -2.08
KTN1-216ENST00000554570 VAPBO95292 243 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 RPN2P04844 631 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 SERPIND1P05546 499 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 IGKV4-1P06312 121 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 PRPS2P11908 318 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 CCR7P32248 378 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 FOXN2P32314 431 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 RPA3P35244 121 aaPredicted RBP2.06□□□□□ -2.08
KTN1-216ENST00000554570 RPL22P35268 128 aaKnown RBP2.06□□□□□ -2.08
KTN1-216ENST00000554570 TTPAP49638 278 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 SUB1P53999 127 aaKnown RBP eCLIP2.06□□□□□ -2.08
KTN1-216ENST00000554570 VSX2P58304 361 aaPredicted RBP2.06□□□□□ -2.08
KTN1-216ENST00000554570 RAP1AP62834 184 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 DCDP81605 110 aaKnown RBP2.06□□□□□ -2.08
KTN1-216ENST00000554570 XIAPP98170 497 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 NCF4Q15080 339 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 PPP1R7Q15435 360 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 KLHL38Q2WGJ6 581 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 CCSMST1Q4G0I0 132 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 HSP90AA5PQ58FG0 334 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 ZNF684Q5T5D7 378 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 HES5Q5TA89 166 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 SPESP1Q6UW49 350 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 CALHM3Q86XJ0 350 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 RAB43Q86YS6 212 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 SLC13A5Q86YT5 568 aaPredicted RBP2.06□□□□□ -2.08
KTN1-216ENST00000554570 TBC1D21Q8IYX1 336 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 TTC29Q8NA56 475 aaPredicted RBP2.06□□□□□ -2.08
KTN1-216ENST00000554570 FDCSPQ8NFU4 85 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 OR5K2Q8NHB8 316 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 LKAAEAR1Q8TD35 194 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 MAGEE2Q8TD90 523 aaPredicted RBP2.06□□□□□ -2.08
KTN1-216ENST00000554570 EMG1Q92979 244 aaKnown RBP2.06□□□□□ -2.08
KTN1-216ENST00000554570 CAPZA3Q96KX2 299 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 SELENOSQ9BQE4 189 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 NUDT9Q9BW91 350 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 PARD6BQ9BYG5 372 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 ILKAPQ9H0C8 392 aaPredicted RBP2.06□□□□□ -2.08
KTN1-216ENST00000554570 OR52A5Q9H2C5 316 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 FAM60AQ9NP50 221 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 FBXO6Q9NRD1 293 aaPredicted RBP2.06□□□□□ -2.08
KTN1-216ENST00000554570 CHRAC1Q9NRG0 131 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 SH3BGRL2Q9UJC5 107 aa2.06□□□□□ -2.08
KTN1-216ENST00000554570 SNRNP200O75643 2136 aaKnown RBP2.05□□□□□ -2.08
KTN1-216ENST00000554570 SPTBP11277 2137 aa2.05□□□□□ -2.08
KTN1-216ENST00000554570 SPTA1P02549 2419 aa2.05□□□□□ -2.08
KTN1-216ENST00000554570 LRRK2Q5S007 2527 aa2.05□□□□□ -2.08
KTN1-216ENST00000554570 SLC5A10A0PJK1 596 aa2.05□□□□□ -2.08
KTN1-216ENST00000554570 METTL21EPA6NDL7 271 aa2.05□□□□□ -2.08
KTN1-216ENST00000554570 PRMT5O14744 637 aaPredicted RBP2.05□□□□□ -2.08
KTN1-216ENST00000554570 ARPC3O15145 178 aa2.05□□□□□ -2.08
KTN1-216ENST00000554570 MGRN1O60291 552 aa2.05□□□□□ -2.08
KTN1-216ENST00000554570 DPM1O60762 260 aa2.05□□□□□ -2.08
KTN1-216ENST00000554570 NIPSNAP2O75323 286 aa2.05□□□□□ -2.08
KTN1-216ENST00000554570 BANF1O75531 89 aa2.05□□□□□ -2.08
KTN1-216ENST00000554570 ZNF189O75820 626 aaPredicted RBP2.05□□□□□ -2.08
KTN1-216ENST00000554570 SCGNO76038 276 aa2.05□□□□□ -2.08
KTN1-216ENST00000554570 KRT14P02533 472 aa2.05□□□□□ -2.08
KTN1-216ENST00000554570 CATP04040 527 aaKnown RBP2.05□□□□□ -2.08
KTN1-216ENST00000554570 HEXBP07686 556 aa2.05□□□□□ -2.08
KTN1-216ENST00000554570 ANXA5P08758 320 aa2.05□□□□□ -2.08
KTN1-216ENST00000554570 CD9P21926 228 aa2.05□□□□□ -2.08
KTN1-216ENST00000554570 CMPK1P30085 196 aa2.05□□□□□ -2.08
KTN1-216ENST00000554570 PEBP1P30086 187 aaKnown RBP2.05□□□□□ -2.08
KTN1-216ENST00000554570 CD151P48509 253 aa2.05□□□□□ -2.08
KTN1-216ENST00000554570 ARG2P78540 354 aa2.05□□□□□ -2.08
KTN1-216ENST00000554570 SARNPP82979 210 aaKnown RBP2.05□□□□□ -2.08
KTN1-216ENST00000554570 ERCC8Q13216 396 aa2.05□□□□□ -2.08
KTN1-216ENST00000554570 ITIH4Q14624 930 aa2.05□□□□□ -2.08
KTN1-216ENST00000554570 NKAIN1Q4KMZ8 207 aa2.05□□□□□ -2.08
KTN1-216ENST00000554570 ACSBG2Q5FVE4 666 aa2.05□□□□□ -2.08
KTN1-216ENST00000554570 ANKRD22Q5VYY1 191 aa2.05□□□□□ -2.08
KTN1-216ENST00000554570 ZNF470Q6ECI4 717 aa2.05□□□□□ -2.08
KTN1-216ENST00000554570 CPNE9Q8IYJ1 553 aa2.05□□□□□ -2.08
KTN1-216ENST00000554570 OSR2Q8N2R0 312 aa2.05□□□□□ -2.08
KTN1-216ENST00000554570 SLC35F6Q8N357 371 aa2.05□□□□□ -2.08
KTN1-216ENST00000554570 RNF10Q8N5U6 811 aaKnown RBP2.05□□□□□ -2.08
KTN1-216ENST00000554570 GPATCH11Q8N954 259 aa2.05□□□□□ -2.08
KTN1-216ENST00000554570 ASZ1Q8WWH4 475 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms