RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 ZNF691Q5VV52 312 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 NCR3LG1Q68D85 454 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 KDM4DQ6B0I6 523 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 OR4F3Q6IEY1 312 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 EIF5AL1Q6IS14 154 aaKnown RBP3.74□□□□□ -1.81
ATXN3-225ENST00000554214 REEP3Q6NUK4 255 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 SLC39A4Q6P5W5 647 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 TCF24Q7RTU0 167 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 LRRC28Q86X40 367 aaPredicted RBP3.74□□□□□ -1.81
ATXN3-225ENST00000554214 BAP18Q8IXM2 172 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 PDZD9Q8IXQ8 264 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 HS3ST5Q8IZT8 346 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 LRRC52Q8N7C0 313 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 CLDN22Q8N7P3 220 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 LRTM2Q8N967 370 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 CYB561A3Q8NBI2 242 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 CCNYQ8ND76 341 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 OR4A15Q8NGL6 344 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 OR10A6Q8NH74 314 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 RNASE8Q8TDE3 154 aaKnown RBP3.74□□□□□ -1.81
ATXN3-225ENST00000554214 ORAOV1Q8WV07 137 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 SELENOMQ8WWX9 145 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 ASB13Q8WXK3 278 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 RGP1Q92546 391 aaPredicted RBP3.74□□□□□ -1.81
ATXN3-225ENST00000554214 TM4SF18Q96CE8 201 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 RCN3Q96D15 328 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 SLC41A3Q96GZ6 507 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 RNF157Q96PX1 679 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 PANX1Q96RD7 426 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 TSNAXQ99598 290 aaKnown RBP3.74□□□□□ -1.81
ATXN3-225ENST00000554214 PKMYT1Q99640 499 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 CMSS1Q9BQ75 279 aaKnown RBP3.74□□□□□ -1.81
ATXN3-225ENST00000554214 CHCHD5Q9BSY4 110 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 PTGES2Q9H7Z7 377 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 HRASLSQ9HDD0 168 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 FBXL12Q9NXK8 326 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 RASL12Q9NYN1 266 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 MTCH1Q9NZJ7 389 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 DEC1Q9P2X7 70 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 SEC14L3Q9UDX4 400 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 TBC1D24Q9ULP9 559 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 TP53TG3Q9ULZ0 132 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 FLVCR2Q9UPI3 526 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 POMPQ9Y244 141 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 ATG4BQ9Y4P1 393 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 RBM7Q9Y580 266 aaKnown RBP3.74□□□□□ -1.81
ATXN3-225ENST00000554214 MRPS18BQ9Y676 258 aaKnown RBP3.74□□□□□ -1.81
ATXN3-225ENST00000554214 TEX264Q9Y6I9 313 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 URGCP-MRPS24S4R325 110 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 USP9YO00507 2555 aaPredicted RBP3.73□□□□□ -1.81
ATXN3-225ENST00000554214 COL6A6A6NMZ7 2263 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 NF1P21359 2839 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 KCNE1BA0A087WTH5 132 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 TMEM213A2RRL7 107 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 ZNF840PA6NDX5 716 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 FAM74A7A6NL05 159 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 OR11H12B2RN74 326 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 DISC1C4P0D8 188 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 K7EQD1 137 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 SGK494L7N484 410 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 SLC1A7O00341 560 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 BCL2L11O43521 198 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 TCF21O43680 179 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 SSNA1O43805 119 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 HPGDSO60760 199 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 C6orf47O95873 294 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 IGF2P01344 180 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 IFNA5P01569 189 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 IGHV2-5P01817 119 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 SERPIND1P05546 499 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 CISD3P0C7P0 127 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 SMIM10L1P0DMW3 83 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 ANXA3P12429 323 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 ZNF14P17017 642 aaPredicted RBP3.73□□□□□ -1.81
ATXN3-225ENST00000554214 AZU1P20160 251 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 KDELR1P24390 212 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 RPL4P36578 427 aaKnown RBP3.73□□□□□ -1.81
ATXN3-225ENST00000554214 CDX1P47902 265 aaPredicted RBP3.73□□□□□ -1.81
ATXN3-225ENST00000554214 ARRB1P49407 418 aaPredicted RBP3.73□□□□□ -1.81
ATXN3-225ENST00000554214 EVX1P49640 407 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 RAB9AP51151 201 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 EFNA3P52797 238 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 CLDN18P56856 261 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 DCDP81605 110 aaKnown RBP3.73□□□□□ -1.81
ATXN3-225ENST00000554214 SRSF9Q13242 221 aaKnown RBP eCLIP3.73□□□□□ -1.81
ATXN3-225ENST00000554214 PEA15Q15121 130 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 RSU1Q15404 277 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 IL17AQ16552 155 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 ZNF699Q32M78 642 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 FAM74A3Q4VXF1 159 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 SPIN3Q5JUX0 258 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 COL5A1-AS1Q5SY13 56 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 SYT6Q5T7P8 510 aaPredicted RBP3.73□□□□□ -1.81
ATXN3-225ENST00000554214 MARC1Q5VT66 337 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 RAET1LQ5VY80 246 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 CST9LP1Q5W188 147 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 LAMTOR1Q6IAA8 161 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 OR4C11Q6IEV9 310 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 FAM71E1Q6IPT2 247 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 FAM45BPQ6NSW5 357 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms