RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 IGHV2-5P01817 119 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 HPGDP15428 266 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 AREGP15514 252 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 STMN1P16949 149 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 FUT3P21217 361 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 PCMT1P22061 227 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 PTBP1P26599 531 aaKnown RBP eCLIP2.98□□□□□ -1.934e-18■■■■■ 40.6
ATXN3-217ENST00000553287 ASMTP46597 345 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 CCNG1P51959 295 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 OR2B6P58173 313 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 PRPS1P60891 318 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 ATP6V0D1P61421 351 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 ERVS71-1P61550 626 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 CCL8P80075 99 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 GLO1Q04760 184 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 C2orf80Q0P641 193 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 MERTKQ12866 999 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 IFT88Q13099 833 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 SCGB2A2Q13296 93 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 SNTB2Q13425 540 aaKnown RBP2.98□□□□□ -1.93
ATXN3-217ENST00000553287 QPRTQ15274 297 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 TAF9Q16594 264 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 DEFB112Q30KQ8 113 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 SPRNQ5BIV9 151 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 STEAP4Q687X5 459 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 Q6P435 159 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 C16orf87Q6PH81 154 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 BRD3OSQ6XYD6 125 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 PAGE2Q7Z2X7 111 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 CENPLQ8N0S6 344 aaPredicted RBP2.98□□□□□ -1.93
ATXN3-217ENST00000553287 RNF10Q8N5U6 811 aaKnown RBP2.98□□□□□ -1.93
ATXN3-217ENST00000553287 DEFB108BQ8NET1 73 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 STAG3L4Q8TBR4 150 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 ST7LQ8TDW4 575 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 SELENOMQ8WWX9 145 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 RDH5Q92781 318 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 CDS1Q92903 461 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 RAB8BQ92930 207 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 CHMP6Q96FZ7 201 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 KCNA7Q96RP8 456 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 FAIM2Q9BWQ8 316 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 CHIAQ9BZP6 476 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 RHOJQ9H4E5 214 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 ELOVL6Q9H5J4 265 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 CRLF2Q9HC73 371 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 LZTFL1Q9NQ48 299 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 MEPEQ9NQ76 525 aaPredicted RBP2.98□□□□□ -1.93
ATXN3-217ENST00000553287 CTPS2Q9NRF8 586 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 MIOXQ9UGB7 285 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 ZNF225Q9UK10 706 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 ZNF221Q9UK13 617 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 NUP50Q9UKX7 468 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 PSME2Q9UL46 239 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 WNK2Q9Y3S1 2297 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 A0A1W2PRV1 198 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 CLPSL1A2RUU4 121 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 PLXNB1O43157 2135 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 ERCC1P07992 297 aaPredicted RBP2.97□□□□□ -1.93
ATXN3-217ENST00000553287 BCKDHAP12694 445 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 CCL2P13500 99 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 IVDP26440 423 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 MPIP34949 423 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 P2RX1P51575 399 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 CNN1P51911 297 aaKnown RBP2.97□□□□□ -1.93
ATXN3-217ENST00000553287 ARFIP1P53367 373 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 AQP5P55064 265 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 KRTAP10-1P60331 282 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 UBE2NP61088 152 aaKnown RBP2.97□□□□□ -1.93
ATXN3-217ENST00000553287 RPL32P62910 135 aaKnown RBP2.97□□□□□ -1.93
ATXN3-217ENST00000553287 GALK2Q01415 458 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 PDIA2Q13087 525 aaKnown RBP2.97□□□□□ -1.93
ATXN3-217ENST00000553287 HERPUD1Q15011 391 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 PPP1R7Q15435 360 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 ZNHIT3Q15649 155 aaPredicted RBP2.97□□□□□ -1.93
ATXN3-217ENST00000553287 CDKL4Q5MAI5 379 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 ZNF57Q68EA5 555 aaPredicted RBP2.97□□□□□ -1.93
ATXN3-217ENST00000553287 TMPPEQ6ZT21 453 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 MDP1Q86V88 176 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 CTAGE3PQ8IX95 158 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 CLEC4FQ8N1N0 589 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 OR2L13Q8N349 312 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 KDM8Q8N371 416 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 ZIC4Q8N9L1 334 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 OR10H4Q8NGA5 316 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 CLHC1Q8NHS4 586 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 ADAMTS16Q8TE57 1224 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 TMEM45BQ96B21 275 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 AMDHD1Q96NU7 426 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 GPR22Q99680 433 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 RBBP8Q99708 897 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 BEX1Q9HBH7 125 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 POPDC3Q9HBV1 291 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 AHSPQ9NZD4 102 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 NDUFA13Q9P0J0 144 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 MBD2Q9UBB5 411 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 PCTPQ9UKL6 214 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 ACOT9Q9Y305 439 aa2.97□□□□□ -1.93
ATXN3-217ENST00000553287 POLR3HQ9Y535 204 aaPredicted RBP2.97□□□□□ -1.93
ATXN3-217ENST00000553287 TIMM22Q9Y584 194 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms