RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 TRBV5-7A0A0A0MS05 114 aa8.65□□□□□ -1.02
TRAF1-203ENST00000546084 C9orf170A2RU37 121 aa8.65□□□□□ -1.02
TRAF1-203ENST00000546084 MS4A18H0YCH9 400 aa8.65□□□□□ -1.02
TRAF1-203ENST00000546084 SULT1C2O00338 296 aa8.65□□□□□ -1.02
TRAF1-203ENST00000546084 TERTO14746 1132 aaKnown RBP8.65□□□□□ -1.02
TRAF1-203ENST00000546084 PHF1O43189 567 aaPredicted RBP8.65□□□□□ -1.02
TRAF1-203ENST00000546084 TTRP02766 147 aa8.65□□□□□ -1.02
TRAF1-203ENST00000546084 DAOP14920 347 aa8.65□□□□□ -1.02
TRAF1-203ENST00000546084 APOBEC1P41238 236 aaKnown RBP8.65□□□□□ -1.02
TRAF1-203ENST00000546084 GLP1RP43220 463 aa8.65□□□□□ -1.02
TRAF1-203ENST00000546084 PEA15Q15121 130 aa8.65□□□□□ -1.02
TRAF1-203ENST00000546084 MS4A18Q3C1V0 323 aa8.65□□□□□ -1.02
TRAF1-203ENST00000546084 CLEC2AQ6UVW9 174 aa8.65□□□□□ -1.02
TRAF1-203ENST00000546084 SGPP2Q8IWX5 399 aa8.65□□□□□ -1.02
TRAF1-203ENST00000546084 SPACA9Q96E40 222 aaPredicted RBP8.65□□□□□ -1.02
TRAF1-203ENST00000546084 FAM234AQ9H0X4 552 aa8.65□□□□□ -1.02
TRAF1-203ENST00000546084 ALX4Q9H161 411 aaPredicted RBP8.65□□□□□ -1.02
TRAF1-203ENST00000546084 WIF1Q9Y5W5 379 aa8.65□□□□□ -1.02
TRAF1-203ENST00000546084 OBSL1O75147 1896 aa8.65□□□□□ -1.02
TRAF1-203ENST00000546084 CREBBPQ92793 2442 aa8.65□□□□□ -1.02
TRAF1-203ENST00000546084 A0A1W2PQM1 296 aa8.65□□□□□ -1.03
TRAF1-203ENST00000546084 RRP8O43159 456 aaKnown RBP8.65□□□□□ -1.03
TRAF1-203ENST00000546084 HLA-HP01893 362 aa8.65□□□□□ -1.03
TRAF1-203ENST00000546084 SPP1P10451 314 aa8.65□□□□□ -1.03
TRAF1-203ENST00000546084 KISS1Q15726 138 aa8.65□□□□□ -1.03
TRAF1-203ENST00000546084 CLEC12BQ2HXU8 276 aa8.65□□□□□ -1.03
TRAF1-203ENST00000546084 CEACAM16Q2WEN9 425 aa8.65□□□□□ -1.03
TRAF1-203ENST00000546084 PABPC1L2AQ5JQF8 200 aa8.65□□□□□ -1.03
TRAF1-203ENST00000546084 AVPI1Q5T686 147 aa8.65□□□□□ -1.03
TRAF1-203ENST00000546084 SLC25A26Q70HW3 274 aa8.65□□□□□ -1.03
TRAF1-203ENST00000546084 C1QL2Q7Z5L3 287 aa8.65□□□□□ -1.03
TRAF1-203ENST00000546084 CXorf67Q86X51 503 aaPredicted RBP8.65□□□□□ -1.03
TRAF1-203ENST00000546084 FBXL14Q8N1E6 418 aa8.65□□□□□ -1.03
TRAF1-203ENST00000546084 EIF4E3Q8N5X7 224 aaKnown RBP8.65□□□□□ -1.03
TRAF1-203ENST00000546084 CNEP1R1Q8N9A8 125 aa8.65□□□□□ -1.03
TRAF1-203ENST00000546084 OR13C8Q8NGS7 320 aa8.65□□□□□ -1.03
TRAF1-203ENST00000546084 OR6S1Q8NH40 331 aa8.65□□□□□ -1.03
TRAF1-203ENST00000546084 SPTSSAQ969W0 71 aa8.65□□□□□ -1.03
TRAF1-203ENST00000546084 ZNF501Q96CX3 271 aaPredicted RBP8.65□□□□□ -1.03
TRAF1-203ENST00000546084 SLCO5A1Q9H2Y9 848 aa8.65□□□□□ -1.03
TRAF1-203ENST00000546084 RNF222A6NCQ9 220 aa8.64□□□□□ -1.03
TRAF1-203ENST00000546084 CAMLGP49069 296 aa8.64□□□□□ -1.03
TRAF1-203ENST00000546084 HOXA1P49639 335 aaPredicted RBP8.64□□□□□ -1.03
TRAF1-203ENST00000546084 SRSF3P84103 164 aaKnown RBP8.64□□□□□ -1.03
TRAF1-203ENST00000546084 RAB32Q13637 225 aa8.64□□□□□ -1.03
TRAF1-203ENST00000546084 PUS1Q9Y606 427 aaKnown RBP eCLIP8.64□□□□□ -1.03
TRAF1-203ENST00000546084 DOPEY2Q9Y3R5 2298 aa8.64□□□□□ -1.03
TRAF1-203ENST00000546084 NPIPB9F8W1W9 429 aa8.64□□□□□ -1.03
TRAF1-203ENST00000546084 MRPL33O75394 65 aaKnown RBP8.64□□□□□ -1.03
TRAF1-203ENST00000546084 CRYBA1P05813 215 aa8.64□□□□□ -1.03
TRAF1-203ENST00000546084 OR13C7P0DN81 318 aa8.64□□□□□ -1.03
TRAF1-203ENST00000546084 TUBG1P23258 451 aa8.64□□□□□ -1.03
TRAF1-203ENST00000546084 NPBWR1P48145 328 aa8.64□□□□□ -1.03
TRAF1-203ENST00000546084 MECP2P51608 486 aaKnown RBP8.64□□□□□ -1.03
TRAF1-203ENST00000546084 EFNA3P52797 238 aa8.64□□□□□ -1.03
TRAF1-203ENST00000546084 EMC4Q5J8M3 183 aa8.64□□□□□ -1.03
TRAF1-203ENST00000546084 ABHD17BQ5VST6 288 aa8.64□□□□□ -1.03
TRAF1-203ENST00000546084 GCNT2Q8N0V5 402 aa8.64□□□□□ -1.03
TRAF1-203ENST00000546084 ABHD3Q8WU67 409 aa8.64□□□□□ -1.03
TRAF1-203ENST00000546084 THOC3Q96J01 351 aaKnown RBP8.64□□□□□ -1.03
TRAF1-203ENST00000546084 FBXO7Q9Y3I1 522 aa8.64□□□□□ -1.03
TRAF1-203ENST00000546084 PLCE1Q9P212 2302 aa8.64□□□□□ -1.03
TRAF1-203ENST00000546084 A0A1W2PPC1 479 aa8.64□□□□□ -1.03
TRAF1-203ENST00000546084 C1orf196B1AJZ1 125 aa8.64□□□□□ -1.03
TRAF1-203ENST00000546084 HSD17B6O14756 317 aa8.64□□□□□ -1.03
TRAF1-203ENST00000546084 ACTL6AO96019 429 aa8.64□□□□□ -1.03
TRAF1-203ENST00000546084 PTAFRP25105 342 aa8.64□□□□□ -1.03
TRAF1-203ENST00000546084 ISXQ2M1V0 245 aa8.64□□□□□ -1.03
TRAF1-203ENST00000546084 VHLLQ6RSH7 139 aa8.64□□□□□ -1.03
TRAF1-203ENST00000546084 MEGF10Q96KG7 1140 aa8.64□□□□□ -1.03
TRAF1-203ENST00000546084 PPP1R14DQ9NXH3 145 aa8.64□□□□□ -1.03
TRAF1-203ENST00000546084 B3GALT5Q9Y2C3 310 aa8.64□□□□□ -1.03
TRAF1-203ENST00000546084 MEMO1Q9Y316 297 aa8.64□□□□□ -1.03
TRAF1-203ENST00000546084 K7EPK0 472 aa8.63□□□□□ -1.03
TRAF1-203ENST00000546084 LRP3O75074 770 aa8.63□□□□□ -1.03
TRAF1-203ENST00000546084 TSPAN15O95858 294 aa8.63□□□□□ -1.03
TRAF1-203ENST00000546084 RCC1P18754 421 aaPredicted RBP8.63□□□□□ -1.03
TRAF1-203ENST00000546084 NOVA1P51513 510 aaKnown RBP8.63□□□□□ -1.03
TRAF1-203ENST00000546084 SNRPEP62304 92 aaKnown RBP8.63□□□□□ -1.03
TRAF1-203ENST00000546084 MICBQ29980 383 aa8.63□□□□□ -1.03
TRAF1-203ENST00000546084 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.63□□□□□ -1.03
TRAF1-203ENST00000546084 SLC22A25Q6T423 547 aa8.63□□□□□ -1.03
TRAF1-203ENST00000546084 OPN5Q6U736 354 aa8.63□□□□□ -1.03
TRAF1-203ENST00000546084 TMPRSS7Q7RTY8 843 aa8.63□□□□□ -1.03
TRAF1-203ENST00000546084 MRPL21Q7Z2W9 205 aaKnown RBP8.63□□□□□ -1.03
TRAF1-203ENST00000546084 FAM71E2Q8N5Q1 922 aa8.63□□□□□ -1.03
TRAF1-203ENST00000546084 OR5AP2Q8NGF4 316 aa8.63□□□□□ -1.03
TRAF1-203ENST00000546084 OR56B1Q8NGI3 324 aa8.63□□□□□ -1.03
TRAF1-203ENST00000546084 LIPHQ8WWY8 451 aa8.63□□□□□ -1.03
TRAF1-203ENST00000546084 FBXO17Q96EF6 278 aa8.63□□□□□ -1.03
TRAF1-203ENST00000546084 NAA11Q9BSU3 229 aaPredicted RBP8.63□□□□□ -1.03
TRAF1-203ENST00000546084 P4HTMQ9NXG6 502 aa8.63□□□□□ -1.03
TRAF1-203ENST00000546084 PADI1Q9ULC6 663 aa8.63□□□□□ -1.03
TRAF1-203ENST00000546084 LHX6Q9UPM6 363 aa8.63□□□□□ -1.03
TRAF1-203ENST00000546084 USF3Q68DE3 2245 aa8.63□□□□□ -1.03
TRAF1-203ENST00000546084 PCNX2A6NKB5 2137 aa8.63□□□□□ -1.03
TRAF1-203ENST00000546084 IGLV1-36A0A0B4J1U3 117 aa8.63□□□□□ -1.03
TRAF1-203ENST00000546084 C5orf49A4QMS7 147 aa8.63□□□□□ -1.03
TRAF1-203ENST00000546084 HOXC4P09017 264 aaPredicted RBP8.63□□□□□ -1.03
TRAF1-203ENST00000546084 CLDN15P56746 228 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms