RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 PRSS12P56730 875 aa8.1□□□□□ -1.11
YBX3-215ENST00000544504 SNRPD2P62316 118 aaKnown RBP8.1□□□□□ -1.11
YBX3-215ENST00000544504 SNTB1Q13884 538 aaKnown RBP8.1□□□□□ -1.11
YBX3-215ENST00000544504 PCGF3Q3KNV8 242 aa8.1□□□□□ -1.11
YBX3-215ENST00000544504 AGAP6Q5VW22 663 aa8.1□□□□□ -1.11
YBX3-215ENST00000544504 SHEQ5VZ18 495 aa8.1□□□□□ -1.11
YBX3-215ENST00000544504 AWAT2Q6E213 333 aa8.1□□□□□ -1.11
YBX3-215ENST00000544504 FAM166AQ6J272 317 aa8.1□□□□□ -1.11
YBX3-215ENST00000544504 OR2W3Q7Z3T1 314 aa8.1□□□□□ -1.11
YBX3-215ENST00000544504 PXT1Q8NFP0 134 aa8.1□□□□□ -1.11
YBX3-215ENST00000544504 TRMT10AQ8TBZ6 339 aaKnown RBP8.1□□□□□ -1.11
YBX3-215ENST00000544504 TBC1D15Q8TC07 691 aa8.1□□□□□ -1.11
YBX3-215ENST00000544504 NPRL2Q8WTW4 380 aa8.1□□□□□ -1.11
YBX3-215ENST00000544504 FBXW5Q969U6 566 aa8.1□□□□□ -1.11
YBX3-215ENST00000544504 PTX4Q96A99 478 aa8.1□□□□□ -1.11
YBX3-215ENST00000544504 FAM3DQ96BQ1 224 aa8.1□□□□□ -1.11
YBX3-215ENST00000544504 COX4I2Q96KJ9 171 aa8.1□□□□□ -1.11
YBX3-215ENST00000544504 CEP19Q96LK0 163 aa8.1□□□□□ -1.11
YBX3-215ENST00000544504 SYT3Q9BQG1 590 aa8.1□□□□□ -1.11
YBX3-215ENST00000544504 PKIBQ9C010 78 aa8.1□□□□□ -1.11
YBX3-215ENST00000544504 EGLN1Q9GZT9 426 aa8.1□□□□□ -1.11
YBX3-215ENST00000544504 C6orf62Q9GZU0 229 aaPredicted RBP8.1□□□□□ -1.11
YBX3-215ENST00000544504 CST11Q9H112 138 aa8.1□□□□□ -1.11
YBX3-215ENST00000544504 CNTD2Q9H8S5 307 aa8.1□□□□□ -1.11
YBX3-215ENST00000544504 LIN7BQ9HAP6 207 aa8.1□□□□□ -1.11
YBX3-215ENST00000544504 SMURF1Q9HCE7 757 aa8.1□□□□□ -1.11
YBX3-215ENST00000544504 RABL2AQ9UBK7 228 aaPredicted RBP8.1□□□□□ -1.11
YBX3-215ENST00000544504 FBLN5Q9UBX5 448 aa8.1□□□□□ -1.11
YBX3-215ENST00000544504 FZR1Q9UM11 496 aa8.1□□□□□ -1.11
YBX3-215ENST00000544504 SPATA2Q9UM82 520 aa8.1□□□□□ -1.11
YBX3-215ENST00000544504 RABL2BQ9UNT1 228 aa8.1□□□□□ -1.11
YBX3-215ENST00000544504 MRPS28Q9Y2Q9 187 aaKnown RBP8.1□□□□□ -1.11
YBX3-215ENST00000544504 CADP27708 2225 aa8.1□□□□□ -1.11
YBX3-215ENST00000544504 AKAP6Q13023 2319 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 ZNF732B4DXR9 585 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 H3BUI4 141 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 J3QT63 122 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 HS3ST1O14792 307 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 SIAH2O43255 324 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 KDM4BO94953 1096 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 APOA1P02647 267 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 CSTBP04080 98 aaKnown RBP8.09□□□□□ -1.11
YBX3-215ENST00000544504 TMEM225BP0DP42 221 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 TNFRSF1AP19438 455 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 RAB6AP20340 208 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 TALDO1P37837 337 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 CD200P41217 278 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 MMP15P51511 669 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 GPM6AP51674 278 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 CAV3P56539 151 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 PDZK1IP1Q13113 114 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 FAM76BQ5HYJ3 339 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 HES5Q5TA89 166 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 NR2C2APQ86WQ0 139 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 LRRC28Q86X40 367 aaPredicted RBP8.09□□□□□ -1.11
YBX3-215ENST00000544504 ANGPTL5Q86XS5 388 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 LYPD6Q86Y78 171 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 KRTAP1-3Q8IUG1 177 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 Q8IYB0 196 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 MUC15Q8N387 334 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 KCNG3Q8TAE7 436 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 TNFAIP8L1Q8WVP5 186 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 HPSE2Q8WWQ2 592 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 S100ZQ8WXG8 99 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 RAB40AQ8WXH6 277 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 ERGIC1Q969X5 290 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 PHF21AQ96BD5 680 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 MRPS24Q96EL2 167 aaKnown RBP8.09□□□□□ -1.11
YBX3-215ENST00000544504 ELMOD3Q96FG2 381 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 TSC22D3Q99576 134 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 GFI1Q99684 422 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 METTL9Q9H1A3 318 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 DYNLRB1Q9NP97 96 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 IL36GQ9NZH8 169 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 COMMD3Q9UBI1 195 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 IL19Q9UHD0 177 aa8.09□□□□□ -1.11
YBX3-215ENST00000544504 PLCE1Q9P212 2302 aa8.08□□□□□ -1.12
YBX3-215ENST00000544504 A0A0A6YYH2 397 aa8.08□□□□□ -1.12
YBX3-215ENST00000544504 METTL21EPA6NDL7 271 aa8.08□□□□□ -1.12
YBX3-215ENST00000544504 A6NJ64 397 aa8.08□□□□□ -1.12
YBX3-215ENST00000544504 INAFM1C9JVW0 142 aa8.08□□□□□ -1.12
YBX3-215ENST00000544504 TRAPPC2LH3BP13 241 aa8.08□□□□□ -1.12
YBX3-215ENST00000544504 IFNL4K9M1U5 179 aa8.08□□□□□ -1.12
YBX3-215ENST00000544504 LILRA1O75019 489 aa8.08□□□□□ -1.12
YBX3-215ENST00000544504 TPPPO94811 219 aa8.08□□□□□ -1.12
YBX3-215ENST00000544504 PTBP3O95758 552 aaKnown RBP8.08□□□□□ -1.12
YBX3-215ENST00000544504 CD55P08174 381 aa8.08□□□□□ -1.12
YBX3-215ENST00000544504 ACAA1P09110 424 aaPredicted RBP8.08□□□□□ -1.12
YBX3-215ENST00000544504 SLC2A2P11168 524 aaPredicted RBP8.08□□□□□ -1.12
YBX3-215ENST00000544504 NAT2P11245 290 aa8.08□□□□□ -1.12
YBX3-215ENST00000544504 MPZP25189 248 aa8.08□□□□□ -1.12
YBX3-215ENST00000544504 THBS2P35442 1172 aa8.08□□□□□ -1.12
YBX3-215ENST00000544504 HAAOP46952 286 aa8.08□□□□□ -1.12
YBX3-215ENST00000544504 POU3F4P49335 361 aa8.08□□□□□ -1.12
YBX3-215ENST00000544504 IL24Q13007 206 aa8.08□□□□□ -1.12
YBX3-215ENST00000544504 RSU1Q15404 277 aa8.08□□□□□ -1.12
YBX3-215ENST00000544504 ALKBH6Q3KRA9 238 aa8.08□□□□□ -1.12
YBX3-215ENST00000544504 UBE2NLQ5JXB2 153 aa8.08□□□□□ -1.12
YBX3-215ENST00000544504 SPANXN2Q5MJ10 180 aa8.08□□□□□ -1.12
YBX3-215ENST00000544504 RAB12Q6IQ22 244 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms