RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 RNF133Q8WVZ7 376 aa14.21□□□□□ -0.13
VARS2-212ENST00000542001 AKR1E2Q96JD6 320 aa14.21□□□□□ -0.13
VARS2-212ENST00000542001 LYPD3O95274 346 aa14.21□□□□□ -0.13
VARS2-212ENST00000542001 CLDN1O95832 211 aa14.21□□□□□ -0.13
VARS2-212ENST00000542001 ALKBH6Q3KRA9 238 aa14.21□□□□□ -0.13
VARS2-212ENST00000542001 OR5M9Q8NGP3 310 aa14.21□□□□□ -0.13
VARS2-212ENST00000542001 OR1F12Q8NHA8 337 aa14.21□□□□□ -0.13
VARS2-212ENST00000542001 C2orf50Q96LR7 162 aa14.21□□□□□ -0.13
VARS2-212ENST00000542001 WDR13Q9H1Z4 485 aa14.21□□□□□ -0.13
VARS2-212ENST00000542001 WNT16Q9UBV4 365 aa14.21□□□□□ -0.13
VARS2-212ENST00000542001 GLS2Q9UI32 602 aa14.21□□□□□ -0.13
VARS2-212ENST00000542001 FZR1Q9UM11 496 aa14.21□□□□□ -0.13
VARS2-212ENST00000542001 CCDC187A0A096LP49 1063 aa14.21□□□□□ -0.13
VARS2-212ENST00000542001 NPIPB9F8W1W9 429 aa14.21□□□□□ -0.13
VARS2-212ENST00000542001 DAOP14920 347 aa14.21□□□□□ -0.13
VARS2-212ENST00000542001 BTCP35070 178 aa14.21□□□□□ -0.13
VARS2-212ENST00000542001 SSX9Q7RTT3 188 aa14.21□□□□□ -0.13
VARS2-212ENST00000542001 CBLN2Q8IUK8 224 aa14.21□□□□□ -0.13
VARS2-212ENST00000542001 PLPP5Q8NEB5 264 aa14.21□□□□□ -0.13
VARS2-212ENST00000542001 OR6K3Q8NGY3 331 aa14.21□□□□□ -0.13
VARS2-212ENST00000542001 MOB1AQ9H8S9 216 aa14.21□□□□□ -0.13
VARS2-212ENST00000542001 DOPEY2Q9Y3R5 2298 aa14.21□□□□□ -0.14
VARS2-212ENST00000542001 A0A1W2PQM1 296 aa14.2□□□□□ -0.14
VARS2-212ENST00000542001 GEMIN2O14893 280 aaKnown RBP14.2□□□□□ -0.14
VARS2-212ENST00000542001 HMGB3O15347 200 aaKnown RBP14.2□□□□□ -0.14
VARS2-212ENST00000542001 TGFBR3Q03167 851 aa14.2□□□□□ -0.14
VARS2-212ENST00000542001 PIGYQ3MUY2 71 aa14.2□□□□□ -0.14
VARS2-212ENST00000542001 OR2T2Q6IF00 324 aa14.2□□□□□ -0.14
VARS2-212ENST00000542001 DEFB108BQ8NET1 73 aa14.2□□□□□ -0.14
VARS2-212ENST00000542001 HAS2Q92819 552 aa14.2□□□□□ -0.14
VARS2-212ENST00000542001 CD46P15529 392 aa14.2□□□□□ -0.14
VARS2-212ENST00000542001 MST1P26927 711 aa14.2□□□□□ -0.14
VARS2-212ENST00000542001 COL19A1Q14993 1142 aa14.2□□□□□ -0.14
VARS2-212ENST00000542001 ISXQ2M1V0 245 aa14.2□□□□□ -0.14
VARS2-212ENST00000542001 OSR2Q8N2R0 312 aa14.2□□□□□ -0.14
VARS2-212ENST00000542001 CMTM3Q96MX0 182 aa14.2□□□□□ -0.14
VARS2-212ENST00000542001 CEBPZOSA8MTT3 80 aa14.2□□□□□ -0.14
VARS2-212ENST00000542001 DSCR4P56555 118 aaPredicted RBP14.2□□□□□ -0.14
VARS2-212ENST00000542001 RAB1AP62820 205 aa14.2□□□□□ -0.14
VARS2-212ENST00000542001 GPR137Q96N19 417 aa14.2□□□□□ -0.14
VARS2-212ENST00000542001 WASF3Q9UPY6 502 aa14.2□□□□□ -0.14
VARS2-212ENST00000542001 NOTCH3Q9UM47 2321 aa14.2□□□□□ -0.14
VARS2-212ENST00000542001 DHRS3O75911 302 aa14.2□□□□□ -0.14
VARS2-212ENST00000542001 IFNA17P01571 189 aa14.2□□□□□ -0.14
VARS2-212ENST00000542001 PTAFRP25105 342 aa14.2□□□□□ -0.14
VARS2-212ENST00000542001 DPPA2Q7Z7J5 298 aa14.2□□□□□ -0.14
VARS2-212ENST00000542001 A0A0J9YW62 118 aa14.19□□□□□ -0.14
VARS2-212ENST00000542001 TRBV5-5A0A0J9YX44 114 aa14.19□□□□□ -0.14
VARS2-212ENST00000542001 HSPB2A8KAH6 182 aa14.19□□□□□ -0.14
VARS2-212ENST00000542001 IGKV3-11P04433 115 aa14.19□□□□□ -0.14
VARS2-212ENST00000542001 GCH1P30793 250 aa14.19□□□□□ -0.14
VARS2-212ENST00000542001 SUMO3P55854 103 aaPredicted RBP14.19□□□□□ -0.14
VARS2-212ENST00000542001 EDDM3BP56851 147 aa14.19□□□□□ -0.14
VARS2-212ENST00000542001 UBE2KP61086 200 aa14.19□□□□□ -0.14
VARS2-212ENST00000542001 USF2Q15853 346 aaPredicted RBP14.19□□□□□ -0.14
VARS2-212ENST00000542001 HSPB2Q16082 182 aa14.19□□□□□ -0.14
VARS2-212ENST00000542001 DEGS2Q6QHC5 323 aa14.19□□□□□ -0.14
VARS2-212ENST00000542001 OR2V1Q8NHB1 315 aa14.19□□□□□ -0.14
VARS2-212ENST00000542001 FANCFQ9NPI8 374 aa14.19□□□□□ -0.14
VARS2-212ENST00000542001 GNG12Q9UBI6 72 aa14.19□□□□□ -0.14
VARS2-212ENST00000542001 NMBP08949 121 aa14.19□□□□□ -0.14
VARS2-212ENST00000542001 OR5AC1P0C628 307 aa14.19□□□□□ -0.14
VARS2-212ENST00000542001 ALDH3B1P43353 468 aa14.19□□□□□ -0.14
VARS2-212ENST00000542001 MMP16P51512 607 aa14.19□□□□□ -0.14
VARS2-212ENST00000542001 TSC22D1Q15714 1073 aa14.19□□□□□ -0.14
VARS2-212ENST00000542001 SPANXN5Q5MJ07 72 aa14.19□□□□□ -0.14
VARS2-212ENST00000542001 ZNF468Q5VIY5 522 aaPredicted RBP14.19□□□□□ -0.14
VARS2-212ENST00000542001 RFESDQ8TAC1 157 aa14.19□□□□□ -0.14
VARS2-212ENST00000542001 KIF25Q9UIL4 384 aa14.19□□□□□ -0.14
VARS2-212ENST00000542001 TIMM8BQ9Y5J9 83 aaPredicted RBP14.19□□□□□ -0.14
VARS2-212ENST00000542001 CREBBPQ92793 2442 aa14.19□□□□□ -0.14
VARS2-212ENST00000542001 DEGS1O15121 323 aa14.19□□□□□ -0.14
VARS2-212ENST00000542001 TO15178 435 aa14.19□□□□□ -0.14
VARS2-212ENST00000542001 TNFSF15O95150 251 aa14.19□□□□□ -0.14
VARS2-212ENST00000542001 ZNF133P52736 654 aaPredicted RBP14.19□□□□□ -0.14
VARS2-212ENST00000542001 RPL23AP62750 156 aaKnown RBP14.19□□□□□ -0.14
VARS2-212ENST00000542001 UNQ9370/PRO34162Q6UXP9 181 aa14.19□□□□□ -0.14
VARS2-212ENST00000542001 NANOS1Q8WY41 292 aaKnown RBP14.19□□□□□ -0.14
VARS2-212ENST00000542001 PLK3Q9H4B4 646 aa14.19□□□□□ -0.14
VARS2-212ENST00000542001 PLPPR5Q32ZL2 321 aa14.18□□□□□ -0.14
VARS2-212ENST00000542001 DTWD2Q8NBA8 298 aa14.18□□□□□ -0.14
VARS2-212ENST00000542001 ZNF426Q9BUY5 554 aa14.18□□□□□ -0.14
VARS2-212ENST00000542001 RHOFQ9HBH0 211 aa14.18□□□□□ -0.14
VARS2-212ENST00000542001 WISP1O95388 367 aa14.18□□□□□ -0.14
VARS2-212ENST00000542001 CPN1P15169 458 aa14.18□□□□□ -0.14
VARS2-212ENST00000542001 RCC1P18754 421 aaPredicted RBP14.18□□□□□ -0.14
VARS2-212ENST00000542001 PPIAP62937 165 aaKnown RBP14.18□□□□□ -0.14
VARS2-212ENST00000542001 ARRDC1Q8N5I2 433 aa14.18□□□□□ -0.14
VARS2-212ENST00000542001 OR2M3Q8NG83 312 aa14.18□□□□□ -0.14
VARS2-212ENST00000542001 OR8U1Q8NH10 309 aa14.18□□□□□ -0.14
VARS2-212ENST00000542001 EXTL1Q92935 676 aa14.18□□□□□ -0.14
VARS2-212ENST00000542001 FN3KRPQ9HA64 309 aa14.18□□□□□ -0.14
VARS2-212ENST00000542001 A0A1W2PQD3 144 aa14.18□□□□□ -0.14
VARS2-212ENST00000542001 TIMM8AO60220 97 aaPredicted RBP14.18□□□□□ -0.14
VARS2-212ENST00000542001 A0A1W2PR77 199 aa14.17□□□□□ -0.14
VARS2-212ENST00000542001 EIF3GO75821 320 aaKnown RBP eCLIP14.17□□□□□ -0.14
VARS2-212ENST00000542001 WDR5BQ86VZ2 330 aa14.17□□□□□ -0.14
VARS2-212ENST00000542001 GPX7Q96SL4 187 aaPredicted RBP14.17□□□□□ -0.14
VARS2-212ENST00000542001 UQCC2Q9BRT2 126 aa14.17□□□□□ -0.14
VARS2-212ENST00000542001 INTS1Q8N201 2190 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms