RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 DYRK2Q92630 601 aa11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 GPR84Q9NQS5 396 aa11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 SDHAF3Q9NRP4 125 aa11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 ZNF107Q9UII5 783 aaPredicted RBP11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 GPR132Q9UNW8 380 aa11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 FAM186AA6NE01 2351 aa11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 SHANK1Q9Y566 2161 aa11.01□□□□□ -0.65
SFSWAP-208ENST00000539506 IGKV1-9A0A0C4DH69 117 aa11.01□□□□□ -0.65
SFSWAP-208ENST00000539506 DBX1A6NMT0 343 aa11.01□□□□□ -0.65
SFSWAP-208ENST00000539506 SFT2D2O95562 160 aa11.01□□□□□ -0.65
SFSWAP-208ENST00000539506 TSPAN15O95858 294 aa11.01□□□□□ -0.65
SFSWAP-208ENST00000539506 IGHG1P01857 330 aa11.01□□□□□ -0.65
SFSWAP-208ENST00000539506 CSTBP04080 98 aaKnown RBP11.01□□□□□ -0.65
SFSWAP-208ENST00000539506 SRSF4Q08170 494 aaKnown RBP11.01□□□□□ -0.65
SFSWAP-208ENST00000539506 CHAF1BQ13112 559 aa11.01□□□□□ -0.65
SFSWAP-208ENST00000539506 PRSS54Q6PEW0 395 aa11.01□□□□□ -0.65
SFSWAP-208ENST00000539506 SAP25Q8TEE9 199 aa11.01□□□□□ -0.65
SFSWAP-208ENST00000539506 CDC6Q99741 560 aa11.01□□□□□ -0.65
SFSWAP-208ENST00000539506 WNT16Q9UBV4 365 aa11.01□□□□□ -0.65
SFSWAP-208ENST00000539506 CACFD1Q9UGQ2 172 aa11.01□□□□□ -0.65
SFSWAP-208ENST00000539506 C5orf52A6NGY3 159 aa11.01□□□□□ -0.65
SFSWAP-208ENST00000539506 ZNHIT1O43257 154 aa11.01□□□□□ -0.65
SFSWAP-208ENST00000539506 HKR1P10072 659 aa11.01□□□□□ -0.65
SFSWAP-208ENST00000539506 GABRR1P24046 479 aa11.01□□□□□ -0.65
SFSWAP-208ENST00000539506 ACKR3P25106 362 aa11.01□□□□□ -0.65
SFSWAP-208ENST00000539506 RPL12P30050 165 aaKnown RBP11.01□□□□□ -0.65
SFSWAP-208ENST00000539506 CXCL12P48061 93 aa11.01□□□□□ -0.65
SFSWAP-208ENST00000539506 FXYD4P59646 89 aa11.01□□□□□ -0.65
SFSWAP-208ENST00000539506 GABREP78334 506 aa11.01□□□□□ -0.65
SFSWAP-208ENST00000539506 HGFACQ04756 655 aa11.01□□□□□ -0.65
SFSWAP-208ENST00000539506 ECH1Q13011 328 aa11.01□□□□□ -0.65
SFSWAP-208ENST00000539506 C10orf91Q5T1B1 145 aa11.01□□□□□ -0.65
SFSWAP-208ENST00000539506 MRPL14Q6P1L8 145 aaKnown RBP11.01□□□□□ -0.65
SFSWAP-208ENST00000539506 CLDN23Q96B33 292 aa11.01□□□□□ -0.65
SFSWAP-208ENST00000539506 SGK3Q96BR1 496 aa11.01□□□□□ -0.65
SFSWAP-208ENST00000539506 SPACA9Q96E40 222 aaPredicted RBP11.01□□□□□ -0.65
SFSWAP-208ENST00000539506 SLC26A1Q9H2B4 701 aa11.01□□□□□ -0.65
SFSWAP-208ENST00000539506 NCOA6Q14686 2063 aaPredicted RBP11.01□□□□□ -0.65
SFSWAP-208ENST00000539506 K7EPK0 472 aa11□□□□□ -0.65
SFSWAP-208ENST00000539506 FCGR3AP08637 254 aa11□□□□□ -0.65
SFSWAP-208ENST00000539506 MSX1P28360 303 aa11□□□□□ -0.65
SFSWAP-208ENST00000539506 OPRM1P35372 400 aa11□□□□□ -0.65
SFSWAP-208ENST00000539506 FAM57BQ71RH2 274 aa11□□□□□ -0.65
SFSWAP-208ENST00000539506 C5orf24Q7Z6I8 188 aa11□□□□□ -0.65
SFSWAP-208ENST00000539506 FAM71E2Q8N5Q1 922 aa11□□□□□ -0.65
SFSWAP-208ENST00000539506 FADS6Q8N9I5 356 aa11□□□□□ -0.65
SFSWAP-208ENST00000539506 OR6X1Q8NH79 312 aa11□□□□□ -0.65
SFSWAP-208ENST00000539506 SLAMF9Q96A28 289 aa11□□□□□ -0.65
SFSWAP-208ENST00000539506 MRPL24Q96A35 216 aaKnown RBP11□□□□□ -0.65
SFSWAP-208ENST00000539506 ZNF775Q96BV0 537 aaPredicted RBP11□□□□□ -0.65
SFSWAP-208ENST00000539506 NMES1Q9C002 83 aa11□□□□□ -0.65
SFSWAP-208ENST00000539506 PISDQ9UG56 409 aa11□□□□□ -0.65
SFSWAP-208ENST00000539506 TRIOBPQ9H2D6 2365 aa11□□□□□ -0.65
SFSWAP-208ENST00000539506 PMS2P1A4D2B8 440 aa11□□□□□ -0.65
SFSWAP-208ENST00000539506 GPR37O15354 613 aa11□□□□□ -0.65
SFSWAP-208ENST00000539506 ONECUT2O95948 504 aa11□□□□□ -0.65
SFSWAP-208ENST00000539506 FBP1P09467 338 aa11□□□□□ -0.65
SFSWAP-208ENST00000539506 MPZP25189 248 aa11□□□□□ -0.65
SFSWAP-208ENST00000539506 LURAP1LQ8IV03 231 aa11□□□□□ -0.65
SFSWAP-208ENST00000539506 LYZL4Q96KX0 146 aa11□□□□□ -0.65
SFSWAP-208ENST00000539506 RHOVQ96L33 236 aa11□□□□□ -0.65
SFSWAP-208ENST00000539506 GPHA2Q96T91 129 aa11□□□□□ -0.65
SFSWAP-208ENST00000539506 RARRES2Q99969 163 aa11□□□□□ -0.65
SFSWAP-208ENST00000539506 TMEM59Q9BXS4 323 aa11□□□□□ -0.65
SFSWAP-208ENST00000539506 IGHV3-15A0A0B4J1V0 119 aa11□□□□□ -0.65
SFSWAP-208ENST00000539506 ZNF708P17019 499 aa11□□□□□ -0.65
SFSWAP-208ENST00000539506 HLA-GP17693 338 aa11□□□□□ -0.65
SFSWAP-208ENST00000539506 BLVRBP30043 206 aaPredicted RBP11□□□□□ -0.65
SFSWAP-208ENST00000539506 CX3CR1P49238 355 aa11□□□□□ -0.65
SFSWAP-208ENST00000539506 C6orf201Q7Z4U5 140 aa11□□□□□ -0.65
SFSWAP-208ENST00000539506 OR2AJ1Q8NGZ0 328 aa11□□□□□ -0.65
SFSWAP-208ENST00000539506 SLC22A8Q8TCC7 542 aa11□□□□□ -0.65
SFSWAP-208ENST00000539506 G3V3Y1 287 aa10.99□□□□□ -0.65
SFSWAP-208ENST00000539506 EIF1BO60739 113 aaKnown RBP10.99□□□□□ -0.65
SFSWAP-208ENST00000539506 IFNA4P05014 189 aa10.99□□□□□ -0.65
SFSWAP-208ENST00000539506 OR8U8P0C7N1 319 aa10.99□□□□□ -0.65
SFSWAP-208ENST00000539506 PNLIPP16233 465 aa10.99□□□□□ -0.65
SFSWAP-208ENST00000539506 OMGP23515 440 aa10.99□□□□□ -0.65
SFSWAP-208ENST00000539506 PTGER4P35408 488 aa10.99□□□□□ -0.65
SFSWAP-208ENST00000539506 EIF1P41567 113 aaKnown RBP10.99□□□□□ -0.65
SFSWAP-208ENST00000539506 GSK3AP49840 483 aa10.99□□□□□ -0.65
SFSWAP-208ENST00000539506 PCOLCEQ15113 449 aa10.99□□□□□ -0.65
SFSWAP-208ENST00000539506 RSPO1Q2MKA7 263 aaPredicted RBP10.99□□□□□ -0.65
SFSWAP-208ENST00000539506 AADACL3Q5VUY0 350 aa10.99□□□□□ -0.65
SFSWAP-208ENST00000539506 IL34Q6ZMJ4 242 aa10.99□□□□□ -0.65
SFSWAP-208ENST00000539506 ADPRHL1Q8NDY3 354 aa10.99□□□□□ -0.65
SFSWAP-208ENST00000539506 SSC4DQ8WTU2 575 aa10.99□□□□□ -0.65
SFSWAP-208ENST00000539506 PIGTQ969N2 578 aa10.99□□□□□ -0.65
SFSWAP-208ENST00000539506 OXGR1Q96P68 337 aa10.99□□□□□ -0.65
SFSWAP-208ENST00000539506 ABHD14AQ9BUJ0 271 aa10.99□□□□□ -0.65
SFSWAP-208ENST00000539506 DEFB126Q9BYW3 111 aa10.99□□□□□ -0.65
SFSWAP-208ENST00000539506 PROK2Q9HC23 129 aa10.99□□□□□ -0.65
SFSWAP-208ENST00000539506 TINAGQ9UJW2 476 aa10.99□□□□□ -0.65
SFSWAP-208ENST00000539506 NBEAQ8NFP9 2946 aa10.99□□□□□ -0.65
SFSWAP-208ENST00000539506 AQP7P3A6NL99 342 aa10.99□□□□□ -0.65
SFSWAP-208ENST00000539506 CDC14BO60729 498 aa10.99□□□□□ -0.65
SFSWAP-208ENST00000539506 ZNF43P17038 809 aa10.99□□□□□ -0.65
SFSWAP-208ENST00000539506 RPS10P46783 165 aaKnown RBP10.99□□□□□ -0.65
SFSWAP-208ENST00000539506 ZNF343Q6P1L6 599 aa10.99□□□□□ -0.65
SFSWAP-208ENST00000539506 SMIM8Q96KF7 97 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms