RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 ZSCAN4Q8NAM6 433 aaPredicted RBP21.66■■□□□ 1.06
RAB40C-204ENST00000538492 EMG1Q92979 244 aaKnown RBP21.66■■□□□ 1.06
RAB40C-204ENST00000538492 TAAR9Q96RI9 348 aa21.66■■□□□ 1.06
RAB40C-204ENST00000538492 RNF126Q9BV68 326 aa21.66■■□□□ 1.06
RAB40C-204ENST00000538492 METTL8Q9H825 291 aaKnown RBP21.66■■□□□ 1.06
RAB40C-204ENST00000538492 ARID1AO14497 2285 aa21.65■■□□□ 1.06
RAB40C-204ENST00000538492 FREM1Q5H8C1 2179 aa21.65■■□□□ 1.06
RAB40C-204ENST00000538492 C9orf172C9J069 976 aa21.65■■□□□ 1.06
RAB40C-204ENST00000538492 RPUSD3Q6P087 351 aaKnown RBP21.65■■□□□ 1.06
RAB40C-204ENST00000538492 HSD17B13Q7Z5P4 300 aaPredicted RBP21.65■■□□□ 1.06
RAB40C-204ENST00000538492 STPG2Q8N412 459 aa21.65■■□□□ 1.06
RAB40C-204ENST00000538492 BORCS8Q96FH0 119 aa21.65■■□□□ 1.06
RAB40C-204ENST00000538492 FOXJ2Q9P0K8 574 aa21.65■■□□□ 1.06
RAB40C-204ENST00000538492 H0YIZ8 118 aa21.65■■□□□ 1.06
RAB40C-204ENST00000538492 MSTNO14793 375 aa21.65■■□□□ 1.06
RAB40C-204ENST00000538492 CNN3Q15417 329 aaKnown RBP21.65■■□□□ 1.06
RAB40C-204ENST00000538492 ELP2Q6IA86 826 aa21.65■■□□□ 1.06
RAB40C-204ENST00000538492 GLRX5Q86SX6 157 aa21.65■■□□□ 1.06
RAB40C-204ENST00000538492 RRNAD1Q96FB5 475 aaKnown RBP21.65■■□□□ 1.06
RAB40C-204ENST00000538492 ARPC5LQ9BPX5 153 aa21.65■■□□□ 1.06
RAB40C-204ENST00000538492 RAB18Q9NP72 206 aa21.65■■□□□ 1.06
RAB40C-204ENST00000538492 CNR1P21554 472 aa21.64■■□□□ 1.06
RAB40C-204ENST00000538492 RBP2P50120 134 aa21.64■■□□□ 1.06
RAB40C-204ENST00000538492 RRADP55042 308 aa21.64■■□□□ 1.06
RAB40C-204ENST00000538492 CYCSP99999 105 aaKnown RBP21.64■■□□□ 1.06
RAB40C-204ENST00000538492 ZNF92Q03936 586 aa21.64■■□□□ 1.06
RAB40C-204ENST00000538492 ARL6IP1Q15041 203 aa21.64■■□□□ 1.06
RAB40C-204ENST00000538492 BRICD5Q6PL45 260 aa21.64■■□□□ 1.06
RAB40C-204ENST00000538492 CPNE4Q96A23 557 aaPredicted RBP21.64■■□□□ 1.06
RAB40C-204ENST00000538492 OR10C1Q96KK4 312 aa21.64■■□□□ 1.06
RAB40C-204ENST00000538492 HES7Q9BYE0 225 aa21.64■■□□□ 1.06
RAB40C-204ENST00000538492 KRBOX1C9JBD0 128 aa21.64■■□□□ 1.05
RAB40C-204ENST00000538492 NRASP01111 189 aa21.64■■□□□ 1.05
RAB40C-204ENST00000538492 CELA3AP09093 270 aa21.64■■□□□ 1.05
RAB40C-204ENST00000538492 SIGLEC12Q96PQ1 595 aa21.64■■□□□ 1.05
RAB40C-204ENST00000538492 ZNF2Q9BSG1 426 aaPredicted RBP21.64■■□□□ 1.05
RAB40C-204ENST00000538492 MS4A7Q9GZW8 240 aaPredicted RBP21.64■■□□□ 1.05
RAB40C-204ENST00000538492 CYTIPO60759 359 aa21.63■■□□□ 1.05
RAB40C-204ENST00000538492 RPS2P15880 293 aaKnown RBP21.63■■□□□ 1.05
RAB40C-204ENST00000538492 DBX2Q6ZNG2 339 aa21.63■■□□□ 1.05
RAB40C-204ENST00000538492 MOB3CQ70IA8 216 aa21.63■■□□□ 1.05
RAB40C-204ENST00000538492 DYRK2Q92630 601 aa21.63■■□□□ 1.05
RAB40C-204ENST00000538492 LNP1A1A4G5 178 aa21.63■■□□□ 1.05
RAB40C-204ENST00000538492 ZNHIT1O43257 154 aa21.63■■□□□ 1.05
RAB40C-204ENST00000538492 PRKACBP22694 351 aa21.63■■□□□ 1.05
RAB40C-204ENST00000538492 OPRM1P35372 400 aa21.63■■□□□ 1.05
RAB40C-204ENST00000538492 SNTB1Q13884 538 aaKnown RBP21.63■■□□□ 1.05
RAB40C-204ENST00000538492 C9orf135Q5VTT2 229 aa21.63■■□□□ 1.05
RAB40C-204ENST00000538492 ZPBPQ9BS86 351 aa21.63■■□□□ 1.05
RAB40C-204ENST00000538492 ACKR4Q9NPB9 350 aa21.63■■□□□ 1.05
RAB40C-204ENST00000538492 AK3Q9UIJ7 227 aa21.63■■□□□ 1.05
RAB40C-204ENST00000538492 HOXB5P09067 269 aa21.62■■□□□ 1.05
RAB40C-204ENST00000538492 FAM3AP98173 230 aa21.62■■□□□ 1.05
RAB40C-204ENST00000538492 KRTAP27-1Q3LI81 207 aa21.62■■□□□ 1.05
RAB40C-204ENST00000538492 ZNF528Q3MIS6 628 aa21.62■■□□□ 1.05
RAB40C-204ENST00000538492 RIPPLY2Q5TAB7 128 aa21.62■■□□□ 1.05
RAB40C-204ENST00000538492 TSPO2Q5TGU0 170 aa21.62■■□□□ 1.05
RAB40C-204ENST00000538492 BARX1Q9HBU1 254 aaPredicted RBP21.62■■□□□ 1.05
RAB40C-204ENST00000538492 BOKQ9UMX3 212 aaPredicted RBP21.62■■□□□ 1.05
RAB40C-204ENST00000538492 KNTC1P50748 2209 aa21.62■■□□□ 1.05
RAB40C-204ENST00000538492 ZNF205O95201 554 aa21.62■■□□□ 1.05
RAB40C-204ENST00000538492 HOXD4P09016 255 aaPredicted RBP21.62■■□□□ 1.05
RAB40C-204ENST00000538492 PIGYQ3MUY2 71 aa21.62■■□□□ 1.05
RAB40C-204ENST00000538492 RTL6Q6ICC9 239 aa21.62■■□□□ 1.05
RAB40C-204ENST00000538492 BOLLQ8N9W6 283 aaKnown RBP21.62■■□□□ 1.05
RAB40C-204ENST00000538492 OR5AC2Q9NZP5 309 aa21.62■■□□□ 1.05
RAB40C-204ENST00000538492 C14orf166Q9Y224 244 aaKnown RBP21.62■■□□□ 1.05
RAB40C-204ENST00000538492 IGKV1-12A0A0C4DH73 117 aa21.61■■□□□ 1.05
RAB40C-204ENST00000538492 A0A1W2PNU3 283 aaPredicted RBP21.61■■□□□ 1.05
RAB40C-204ENST00000538492 NEURL1O76050 574 aa21.61■■□□□ 1.05
RAB40C-204ENST00000538492 IGKV1D-12P01611 117 aa21.61■■□□□ 1.05
RAB40C-204ENST00000538492 PAN3Q58A45 887 aaKnown RBP21.61■■□□□ 1.05
RAB40C-204ENST00000538492 GSKIPQ9P0R6 139 aa21.61■■□□□ 1.05
RAB40C-204ENST00000538492 NOSIPQ9Y314 301 aaKnown RBP21.61■■□□□ 1.05
RAB40C-204ENST00000538492 MRPS18CQ9Y3D5 142 aaKnown RBP21.61■■□□□ 1.05
RAB40C-204ENST00000538492 GEMIN2O14893 280 aaKnown RBP21.61■■□□□ 1.05
RAB40C-204ENST00000538492 CA11O75493 328 aa21.61■■□□□ 1.05
RAB40C-204ENST00000538492 PTGER4P35408 488 aa21.61■■□□□ 1.05
RAB40C-204ENST00000538492 PCBD1P61457 104 aa21.61■■□□□ 1.05
RAB40C-204ENST00000538492 PPA1Q15181 289 aa21.61■■□□□ 1.05
RAB40C-204ENST00000538492 PABPC1L2AQ5JQF8 200 aa21.61■■□□□ 1.05
RAB40C-204ENST00000538492 LHFPL2Q6ZUX7 228 aa21.61■■□□□ 1.05
RAB40C-204ENST00000538492 PIGCQ92535 297 aa21.61■■□□□ 1.05
RAB40C-204ENST00000538492 MRPS24Q96EL2 167 aaKnown RBP21.61■■□□□ 1.05
RAB40C-204ENST00000538492 PHYHIPLQ96FC7 376 aa21.61■■□□□ 1.05
RAB40C-204ENST00000538492 SPRY4Q9C004 299 aa21.61■■□□□ 1.05
RAB40C-204ENST00000538492 ANXA10Q9UJ72 324 aa21.61■■□□□ 1.05
RAB40C-204ENST00000538492 TRBV6-7A0A0A0MS04 114 aa21.6■■□□□ 1.05
RAB40C-204ENST00000538492 A0A0B4J2A0 478 aa21.6■■□□□ 1.05
RAB40C-204ENST00000538492 hCG_38984A0A1B0GV85 526 aa21.6■■□□□ 1.05
RAB40C-204ENST00000538492 CPEB3Q8NE35 698 aaKnown RBP21.6■■□□□ 1.05
RAB40C-204ENST00000538492 OR2M7Q8NG81 312 aa21.6■■□□□ 1.05
RAB40C-204ENST00000538492 PIK3IP1Q96FE7 263 aa21.6■■□□□ 1.05
RAB40C-204ENST00000538492 SULT4A1Q9BR01 284 aa21.6■■□□□ 1.05
RAB40C-204ENST00000538492 TAS2R3Q9NYW6 316 aa21.6■■□□□ 1.05
RAB40C-204ENST00000538492 SHPKQ9UHJ6 478 aa21.6■■□□□ 1.05
RAB40C-204ENST00000538492 FAM221AA4D161 298 aa21.6■■□□□ 1.05
RAB40C-204ENST00000538492 MSGN1A6NI15 193 aa21.6■■□□□ 1.05
RAB40C-204ENST00000538492 ZNF587BE7ETH6 402 aa21.6■■□□□ 1.05
RAB40C-204ENST00000538492 MRPL33O75394 65 aaKnown RBP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms