RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	TFR2	Q9UP52	801 aa		3.1	□□□□□ -1.91
PRKDC-208	ENST00000536710	MYO10	Q9HD67	2058 aa		3.09	□□□□□ -1.91
PRKDC-208	ENST00000536710		K7EM74	188 aa		3.09	□□□□□ -1.91
PRKDC-208	ENST00000536710	ZNF593	O00488	134 aa	Predicted RBP	3.09	□□□□□ -1.91
PRKDC-208	ENST00000536710	TCAP	O15273	167 aa		3.09	□□□□□ -1.91
PRKDC-208	ENST00000536710	DHRS3	O75911	302 aa		3.09	□□□□□ -1.91
PRKDC-208	ENST00000536710	OR12D2	P58182	307 aa		3.09	□□□□□ -1.91
PRKDC-208	ENST00000536710	RPL10A	P62906	217 aa	Known RBP	3.09	□□□□□ -1.91
PRKDC-208	ENST00000536710	SHH	Q15465	462 aa		3.09	□□□□□ -1.91
PRKDC-208	ENST00000536710	APOBEC3H	Q6NTF7	200 aa	Known RBP	3.09	□□□□□ -1.91
PRKDC-208	ENST00000536710	FAHD1	Q6P587	224 aa		3.09	□□□□□ -1.91
PRKDC-208	ENST00000536710	PRSS54	Q6PEW0	395 aa		3.09	□□□□□ -1.91
PRKDC-208	ENST00000536710	BBS7	Q8IWZ6	715 aa		3.09	□□□□□ -1.91
PRKDC-208	ENST00000536710	NELFCD	Q8IXH7	590 aa		3.09	□□□□□ -1.91
PRKDC-208	ENST00000536710	CCNYL1	Q8N7R7	359 aa		3.09	□□□□□ -1.91
PRKDC-208	ENST00000536710	SPANXA2-OT1	Q8N9U9	137 aa		3.09	□□□□□ -1.91
PRKDC-208	ENST00000536710	ZNF420	Q8TAQ5	688 aa	Predicted RBP	3.09	□□□□□ -1.91
PRKDC-208	ENST00000536710	LGALS14	Q8TCE9	139 aa		3.09	□□□□□ -1.91
PRKDC-208	ENST00000536710	SMIM8	Q96KF7	97 aa		3.09	□□□□□ -1.91
PRKDC-208	ENST00000536710	ZFP3	Q96NJ6	502 aa		3.09	□□□□□ -1.91
PRKDC-208	ENST00000536710	IP6K3	Q96PC2	410 aa		3.09	□□□□□ -1.91
PRKDC-208	ENST00000536710	METTL26	Q96S19	204 aa		3.09	□□□□□ -1.91
PRKDC-208	ENST00000536710	VAT1	Q99536	393 aa		3.09	□□□□□ -1.91
PRKDC-208	ENST00000536710	CTRC	Q99895	268 aa		3.09	□□□□□ -1.91
PRKDC-208	ENST00000536710	PDCD1LG2	Q9BQ51	273 aa		3.09	□□□□□ -1.91
PRKDC-208	ENST00000536710	ING2	Q9H160	280 aa		3.09	□□□□□ -1.91
PRKDC-208	ENST00000536710	WDR55	Q9H6Y2	383 aa	Predicted RBP	3.09	□□□□□ -1.91
PRKDC-208	ENST00000536710	ACOT13	Q9NPJ3	140 aa		3.09	□□□□□ -1.91
PRKDC-208	ENST00000536710	ZNF302	Q9NR11	478 aa		3.09	□□□□□ -1.91
PRKDC-208	ENST00000536710		A0A1B0GW15	77 aa		3.08	□□□□□ -1.92
PRKDC-208	ENST00000536710	SLC5A10	A0PJK1	596 aa		3.08	□□□□□ -1.92
PRKDC-208	ENST00000536710	TMEM72	A0PK05	275 aa		3.08	□□□□□ -1.92
PRKDC-208	ENST00000536710	DNASE1L1	P49184	302 aa		3.08	□□□□□ -1.92
PRKDC-208	ENST00000536710	DSTN	P60981	165 aa		3.08	□□□□□ -1.92
PRKDC-208	ENST00000536710	ELF3	P78545	371 aa	Predicted RBP	3.08	□□□□□ -1.92
PRKDC-208	ENST00000536710	TMED1	Q13445	227 aa		3.08	□□□□□ -1.92
PRKDC-208	ENST00000536710	GPR176	Q14439	515 aa		3.08	□□□□□ -1.92
PRKDC-208	ENST00000536710	TNXA	Q16473	311 aa		3.08	□□□□□ -1.92
PRKDC-208	ENST00000536710	DNLZ	Q5SXM8	178 aa		3.08	□□□□□ -1.92
PRKDC-208	ENST00000536710	IDNK	Q5T6J7	187 aa		3.08	□□□□□ -1.92
PRKDC-208	ENST00000536710	LIN9	Q5TKA1	542 aa		3.08	□□□□□ -1.92
PRKDC-208	ENST00000536710	RESP18	Q5W5W9	173 aa		3.08	□□□□□ -1.92
PRKDC-208	ENST00000536710	MED27	Q6P2C8	311 aa		3.08	□□□□□ -1.92
PRKDC-208	ENST00000536710	CLEC19A	Q6UXS0	136 aa		3.08	□□□□□ -1.92
PRKDC-208	ENST00000536710	SLC35G3	Q8N808	338 aa		3.08	□□□□□ -1.92
PRKDC-208	ENST00000536710	OR2M7	Q8NG81	312 aa		3.08	□□□□□ -1.92
PRKDC-208	ENST00000536710	OR8K3	Q8NH51	312 aa		3.08	□□□□□ -1.92
PRKDC-208	ENST00000536710	C22orf15	Q8WYQ4	148 aa		3.08	□□□□□ -1.92
PRKDC-208	ENST00000536710	YIPF6	Q96EC8	236 aa		3.08	□□□□□ -1.92
PRKDC-208	ENST00000536710	C19orf60	Q96EN9	201 aa		3.08	□□□□□ -1.92
PRKDC-208	ENST00000536710	RHOXF2	Q9BQY4	288 aa		3.08	□□□□□ -1.92
PRKDC-208	ENST00000536710	CA10	Q9NS85	328 aa		3.08	□□□□□ -1.92
PRKDC-208	ENST00000536710	PRO0628	Q9UI54	55 aa		3.08	□□□□□ -1.92
PRKDC-208	ENST00000536710	RWDD2A	Q9UIY3	292 aa		3.08	□□□□□ -1.92
PRKDC-208	ENST00000536710	ANXA10	Q9UJ72	324 aa		3.08	□□□□□ -1.92
PRKDC-208	ENST00000536710	ZNF879	B4DU55	563 aa		3.07	□□□□□ -1.92
PRKDC-208	ENST00000536710	PRAMEF26	H0Y7S4	382 aa		3.07	□□□□□ -1.92
PRKDC-208	ENST00000536710	GIMD1	P0DJR0	217 aa		3.07	□□□□□ -1.92
PRKDC-208	ENST00000536710	CCL2	P13500	99 aa		3.07	□□□□□ -1.92
PRKDC-208	ENST00000536710	ZNF14	P17017	642 aa	Predicted RBP	3.07	□□□□□ -1.92
PRKDC-208	ENST00000536710	NELFE	P18615	380 aa	Known RBP	3.07	□□□□□ -1.92
PRKDC-208	ENST00000536710	NTF3	P20783	257 aa		3.07	□□□□□ -1.92
PRKDC-208	ENST00000536710	P2RY2	P41231	377 aa		3.07	□□□□□ -1.92
PRKDC-208	ENST00000536710	C2orf80	Q0P641	193 aa		3.07	□□□□□ -1.92
PRKDC-208	ENST00000536710	TOMM34	Q15785	309 aa	Predicted RBP	3.07	□□□□□ -1.92
PRKDC-208	ENST00000536710	C18orf21	Q32NC0	220 aa	Predicted RBP	3.07	□□□□□ -1.92
PRKDC-208	ENST00000536710	FBXL19-AS1	Q494R0	122 aa		3.07	□□□□□ -1.92
PRKDC-208	ENST00000536710	ITPRIP	Q8IWB1	547 aa		3.07	□□□□□ -1.92
PRKDC-208	ENST00000536710	SPERT	Q8NA61	448 aa		3.07	□□□□□ -1.92
PRKDC-208	ENST00000536710	ST20-AS1	Q8NBB2	130 aa		3.07	□□□□□ -1.92
PRKDC-208	ENST00000536710	ORAOV1	Q8WV07	137 aa		3.07	□□□□□ -1.92
PRKDC-208	ENST00000536710	DEDD2	Q8WXF8	326 aa		3.07	□□□□□ -1.92
PRKDC-208	ENST00000536710	C12orf4	Q9NQ89	552 aa		3.07	□□□□□ -1.92
PRKDC-208	ENST00000536710	ACOT9	Q9Y305	439 aa		3.07	□□□□□ -1.92
PRKDC-208	ENST00000536710	ERICH4	A6NGS2	130 aa		3.06	□□□□□ -1.92
PRKDC-208	ENST00000536710	ZNF98	A6NK75	572 aa		3.06	□□□□□ -1.92
PRKDC-208	ENST00000536710		A8MUU9	505 aa		3.06	□□□□□ -1.92
PRKDC-208	ENST00000536710	OR7C2	O60412	319 aa		3.06	□□□□□ -1.92
PRKDC-208	ENST00000536710	IGKV1-39	P01597	117 aa		3.06	□□□□□ -1.92
PRKDC-208	ENST00000536710	IGKV1D-16	P01601	117 aa		3.06	□□□□□ -1.92
PRKDC-208	ENST00000536710	IGKV1D-39	P04432	117 aa		3.06	□□□□□ -1.92
PRKDC-208	ENST00000536710	OR4Q2	P0C623	313 aa		3.06	□□□□□ -1.92
PRKDC-208	ENST00000536710	LCN1	P31025	176 aa		3.06	□□□□□ -1.92
PRKDC-208	ENST00000536710	HADHB	P55084	474 aa	Known RBP	3.06	□□□□□ -1.92
PRKDC-208	ENST00000536710	UBE2K	P61086	200 aa		3.06	□□□□□ -1.92
PRKDC-208	ENST00000536710	TRDN	Q13061	729 aa		3.06	□□□□□ -1.92
PRKDC-208	ENST00000536710	ACTL10	Q5JWF8	245 aa		3.06	□□□□□ -1.92
PRKDC-208	ENST00000536710	IGFL1	Q6UW32	110 aa		3.06	□□□□□ -1.92
PRKDC-208	ENST00000536710	UGT2A3	Q6UWM9	527 aa		3.06	□□□□□ -1.92
PRKDC-208	ENST00000536710	SSX6	Q7RTT6	188 aa		3.06	□□□□□ -1.92
PRKDC-208	ENST00000536710	TCAIM	Q8N3R3	496 aa		3.06	□□□□□ -1.92
PRKDC-208	ENST00000536710	RNF10	Q8N5U6	811 aa	Known RBP	3.06	□□□□□ -1.92
PRKDC-208	ENST00000536710	MIR7-3HG	Q8N6C7	128 aa		3.06	□□□□□ -1.92
PRKDC-208	ENST00000536710	APCDD1L	Q8NCL9	501 aa		3.06	□□□□□ -1.92
PRKDC-208	ENST00000536710	OR4K2	Q8NGD2	314 aa		3.06	□□□□□ -1.92
PRKDC-208	ENST00000536710	C1orf50	Q9BV19	199 aa		3.06	□□□□□ -1.92
PRKDC-208	ENST00000536710	PRORY	Q9H606	182 aa		3.06	□□□□□ -1.92
PRKDC-208	ENST00000536710	RMND1	Q9NWS8	449 aa		3.06	□□□□□ -1.92
PRKDC-208	ENST00000536710	CLEC2D	Q9UHP7	191 aa		3.06	□□□□□ -1.92
PRKDC-208	ENST00000536710	CABIN1	Q9Y6J0	2220 aa		3.06	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms