RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 CCDC58Q4VC31 144 aa16.97■□□□□ 0.31
CCS-208ENST00000533244 OR2G6Q5TZ20 316 aa16.97■□□□□ 0.31
CCS-208ENST00000533244 ZNF788Q6ZQV5 615 aa16.97■□□□□ 0.31
CCS-208ENST00000533244 CALHM1Q8IU99 346 aa16.97■□□□□ 0.31
CCS-208ENST00000533244 FGGYQ96C11 551 aa16.97■□□□□ 0.31
CCS-208ENST00000533244 PKIBQ9C010 78 aa16.97■□□□□ 0.31
CCS-208ENST00000533244 RASL12Q9NYN1 266 aa16.97■□□□□ 0.31
CCS-208ENST00000533244 NLKQ9UBE8 527 aa16.97■□□□□ 0.31
CCS-208ENST00000533244 DNAJB11Q9UBS4 358 aa16.97■□□□□ 0.31
CCS-208ENST00000533244 PSORS1C1Q9UIG5 152 aa16.97■□□□□ 0.31
CCS-208ENST00000533244 POLDIP2Q9Y2S7 368 aa16.97■□□□□ 0.31
CCS-208ENST00000533244 AUP1Q9Y679 476 aa16.97■□□□□ 0.31
CCS-208ENST00000533244 IGKV1-27A0A075B6S5 117 aa16.96■□□□□ 0.31
CCS-208ENST00000533244 IGKV1-9A0A0C4DH69 117 aa16.96■□□□□ 0.31
CCS-208ENST00000533244 DVL1O14640 695 aa16.96■□□□□ 0.31
CCS-208ENST00000533244 XPNPEP2O43895 674 aa16.96■□□□□ 0.31
CCS-208ENST00000533244 SERPINA3P01011 423 aa16.96■□□□□ 0.31
CCS-208ENST00000533244 PPIAL4GP0DN37 164 aa16.96■□□□□ 0.31
CCS-208ENST00000533244 MYL12AP19105 171 aa16.96■□□□□ 0.31
CCS-208ENST00000533244 GTF2A1P52655 376 aaPredicted RBP16.96■□□□□ 0.31
CCS-208ENST00000533244 GMFBP60983 142 aa16.96■□□□□ 0.31
CCS-208ENST00000533244 ST3GAL4Q11206 333 aa16.96■□□□□ 0.31
CCS-208ENST00000533244 IL24Q13007 206 aa16.96■□□□□ 0.31
CCS-208ENST00000533244 CNN3Q15417 329 aaKnown RBP16.96■□□□□ 0.31
CCS-208ENST00000533244 CD276Q5ZPR3 534 aa16.96■□□□□ 0.31
CCS-208ENST00000533244 XAF1Q6GPH4 301 aa16.96■□□□□ 0.31
CCS-208ENST00000533244 BTNL3Q6UXE8 466 aa16.96■□□□□ 0.31
CCS-208ENST00000533244 TMPRSS11AQ6ZMR5 421 aa16.96■□□□□ 0.31
CCS-208ENST00000533244 SLC36A1Q7Z2H8 476 aa16.96■□□□□ 0.31
CCS-208ENST00000533244 FAM216BQ8N7L0 139 aa16.96■□□□□ 0.31
CCS-208ENST00000533244 ZNF485Q8NCK3 441 aa16.96■□□□□ 0.31
CCS-208ENST00000533244 DNAAF1Q8NEP3 725 aa16.96■□□□□ 0.31
CCS-208ENST00000533244 OR5T2Q8NGG2 359 aa16.96■□□□□ 0.31
CCS-208ENST00000533244 OR52N1Q8NH53 320 aa16.96■□□□□ 0.31
CCS-208ENST00000533244 NANPQ8TBE9 248 aa16.96■□□□□ 0.31
CCS-208ENST00000533244 TRMT10AQ8TBZ6 339 aaKnown RBP16.96■□□□□ 0.31
CCS-208ENST00000533244 NRIP2Q9BQI9 281 aa16.96■□□□□ 0.31
CCS-208ENST00000533244 NUDT16L1Q9BRJ7 211 aaKnown RBP16.96■□□□□ 0.31
CCS-208ENST00000533244 MRI1Q9BV20 369 aa16.96■□□□□ 0.31
CCS-208ENST00000533244 RASSF4Q9H2L5 321 aa16.96■□□□□ 0.31
CCS-208ENST00000533244 SNTG1Q9NSN8 517 aa16.96■□□□□ 0.31
CCS-208ENST00000533244 FKBP14Q9NWM8 211 aa16.96■□□□□ 0.31
CCS-208ENST00000533244 CLEC2DQ9UHP7 191 aa16.96■□□□□ 0.31
CCS-208ENST00000533244 ZNF222Q9UK12 451 aa16.96■□□□□ 0.31
CCS-208ENST00000533244 FBN1P35555 2871 aaKnown RBP16.96■□□□□ 0.31
CCS-208ENST00000533244 FAM230AA0A1W2PPH8 454 aa16.96■□□□□ 0.3
CCS-208ENST00000533244 OR2AT4A6NND4 320 aa16.96■□□□□ 0.3
CCS-208ENST00000533244 H0YHG0 523 aa16.96■□□□□ 0.3
CCS-208ENST00000533244 ENSAO43768 121 aaKnown RBP16.96■□□□□ 0.3
CCS-208ENST00000533244 ERVK11-1P61568 191 aa16.96■□□□□ 0.3
CCS-208ENST00000533244 RIPK1Q13546 671 aa16.96■□□□□ 0.3
CCS-208ENST00000533244 CDK5R1Q15078 307 aa16.96■□□□□ 0.3
CCS-208ENST00000533244 RPL22L1Q6P5R6 122 aaKnown RBP16.96■□□□□ 0.3
CCS-208ENST00000533244 ACP7Q6ZNF0 438 aa16.96■□□□□ 0.3
CCS-208ENST00000533244 ANGPTL5Q86XS5 388 aa16.96■□□□□ 0.3
CCS-208ENST00000533244 OR13C3Q8NGS6 347 aa16.96■□□□□ 0.3
CCS-208ENST00000533244 OR5AK2Q8NH90 309 aa16.96■□□□□ 0.3
CCS-208ENST00000533244 NPRL2Q8WTW4 380 aa16.96■□□□□ 0.3
CCS-208ENST00000533244 TMIGD2Q96BF3 282 aa16.96■□□□□ 0.3
CCS-208ENST00000533244 GAFA1Q96PS6 74 aa16.96■□□□□ 0.3
CCS-208ENST00000533244 PDCD1LG2Q9BQ51 273 aa16.96■□□□□ 0.3
CCS-208ENST00000533244 COMMD4Q9H0A8 199 aa16.96■□□□□ 0.3
CCS-208ENST00000533244 HES4Q9HCC6 221 aa16.96■□□□□ 0.3
CCS-208ENST00000533244 METRNQ9UJH8 293 aa16.96■□□□□ 0.3
CCS-208ENST00000533244 IGKV1D-17A0A075B6S4 117 aa16.95■□□□□ 0.3
CCS-208ENST00000533244 TRBV2A0A0J9YWF9 115 aa16.95■□□□□ 0.3
CCS-208ENST00000533244 LALBAP00709 142 aa16.95■□□□□ 0.3
CCS-208ENST00000533244 PSG2P11465 335 aa16.95■□□□□ 0.3
CCS-208ENST00000533244 ZNF20P17024 532 aa16.95■□□□□ 0.3
CCS-208ENST00000533244 ATF1P18846 271 aa16.95■□□□□ 0.3
CCS-208ENST00000533244 KLF17Q5JT82 389 aaPredicted RBP16.95■□□□□ 0.3
CCS-208ENST00000533244 FGFRL1Q8N441 504 aa16.95■□□□□ 0.3
CCS-208ENST00000533244 RGP1Q92546 391 aaPredicted RBP16.95■□□□□ 0.3
CCS-208ENST00000533244 BORCS8Q96FH0 119 aa16.95■□□□□ 0.3
CCS-208ENST00000533244 ZNF488Q96MN9 340 aa16.95■□□□□ 0.3
CCS-208ENST00000533244 BABAM2Q9NXR7 383 aa16.95■□□□□ 0.3
CCS-208ENST00000533244 NKX6-3A6NJ46 265 aa16.94■□□□□ 0.3
CCS-208ENST00000533244 SIGLEC5O15389 551 aa16.94■□□□□ 0.3
CCS-208ENST00000533244 OGG1O15527 345 aa16.94■□□□□ 0.3
CCS-208ENST00000533244 ECDO95905 644 aaPredicted RBP16.94■□□□□ 0.3
CCS-208ENST00000533244 MT-ND2P03891 347 aa16.94■□□□□ 0.3
CCS-208ENST00000533244 EPHA1P21709 976 aa16.94■□□□□ 0.3
CCS-208ENST00000533244 SCGB2A2Q13296 93 aa16.94■□□□□ 0.3
CCS-208ENST00000533244 MED21Q13503 144 aa16.94■□□□□ 0.3
CCS-208ENST00000533244 PARP16Q8N5Y8 322 aa16.94■□□□□ 0.3
CCS-208ENST00000533244 BPIFB6Q8NFQ5 453 aa16.94■□□□□ 0.3
CCS-208ENST00000533244 SPSB1Q96BD6 273 aa16.94■□□□□ 0.3
CCS-208ENST00000533244 UPRTQ96BW1 309 aa16.94■□□□□ 0.3
CCS-208ENST00000533244 VCX3BQ9H321 246 aa16.94■□□□□ 0.3
CCS-208ENST00000533244 SIRT4Q9Y6E7 314 aaPredicted RBP16.94■□□□□ 0.3
CCS-208ENST00000533244 GPR37O15354 613 aa16.93■□□□□ 0.3
CCS-208ENST00000533244 ALX3O95076 343 aa16.93■□□□□ 0.3
CCS-208ENST00000533244 TFF1P04155 84 aa16.93■□□□□ 0.3
CCS-208ENST00000533244 LIPFP07098 398 aa16.93■□□□□ 0.3
CCS-208ENST00000533244 SELLP14151 372 aa16.93■□□□□ 0.3
CCS-208ENST00000533244 PRKACBP22694 351 aa16.93■□□□□ 0.3
CCS-208ENST00000533244 AZGP1P25311 298 aaKnown RBP16.93■□□□□ 0.3
CCS-208ENST00000533244 RBP2P50120 134 aa16.93■□□□□ 0.3
CCS-208ENST00000533244 IL13RA1P78552 427 aa16.93■□□□□ 0.3
CCS-208ENST00000533244 DGUOKQ16854 277 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms