RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 MXD1Q05195 221 aa9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 TAF9Q16594 264 aa9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 MSMPQ1L6U9 139 aa9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 TBC1D28Q2M2D7 210 aa9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 GFOD2Q3B7J2 385 aa9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 PCGF3Q3KNV8 242 aa9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 HSD17B12Q53GQ0 312 aa9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 ASPHD2Q6ICH7 369 aa9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 COMMD2Q86X83 199 aa9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 PAQR4Q8N4S7 273 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 PLPP7Q8NBV4 271 aa9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 OR13C3Q8NGS6 347 aa9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 RAB1CQ92928 201 aa9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 FGGYQ96C11 551 aa9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 ORAI1Q96D31 301 aa9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 MS4A7Q9GZW8 240 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 CDH20Q9HBT6 801 aa9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 PTTG2Q9NZH5 202 aa9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 GPR160Q9UJ42 338 aa9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 STARD10Q9Y365 291 aa9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 WIPI2Q9Y4P8 454 aa9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 AUP1Q9Y679 476 aa9.5□□□□□ -0.89
TRAPPC4-213ENST00000533149 CLDN25C9JDP6 229 aa9.49□□□□□ -0.89
TRAPPC4-213ENST00000533149 C3orf80F5H4A9 247 aa9.49□□□□□ -0.89
TRAPPC4-213ENST00000533149 FOXH1O75593 365 aa9.49□□□□□ -0.89
TRAPPC4-213ENST00000533149 NGFP01138 241 aa9.49□□□□□ -0.89
TRAPPC4-213ENST00000533149 IL1AP01583 271 aa9.49□□□□□ -0.89
TRAPPC4-213ENST00000533149 SRMP19623 302 aa9.49□□□□□ -0.89
TRAPPC4-213ENST00000533149 CCL1P22362 96 aa9.49□□□□□ -0.89
TRAPPC4-213ENST00000533149 MYL9P24844 172 aa9.49□□□□□ -0.89
TRAPPC4-213ENST00000533149 RBMXP38159 391 aaKnown RBP9.49□□□□□ -0.89
TRAPPC4-213ENST00000533149 RAG2P55895 527 aa9.49□□□□□ -0.89
TRAPPC4-213ENST00000533149 HLXQ14774 488 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC4-213ENST00000533149 DGUOKQ16854 277 aa9.49□□□□□ -0.89
TRAPPC4-213ENST00000533149 VAX1Q5SQQ9 334 aa9.49□□□□□ -0.89
TRAPPC4-213ENST00000533149 GLYATL3Q5SZD4 288 aa9.49□□□□□ -0.89
TRAPPC4-213ENST00000533149 TPRA1Q86W33 373 aa9.49□□□□□ -0.89
TRAPPC4-213ENST00000533149 CCDC54Q8NEL0 328 aa9.49□□□□□ -0.89
TRAPPC4-213ENST00000533149 DEFB108BQ8NET1 73 aa9.49□□□□□ -0.89
TRAPPC4-213ENST00000533149 OR14K1Q8NGZ2 314 aa9.49□□□□□ -0.89
TRAPPC4-213ENST00000533149 THRSPQ92748 146 aa9.49□□□□□ -0.89
TRAPPC4-213ENST00000533149 TMEM106AQ96A25 262 aa9.49□□□□□ -0.89
TRAPPC4-213ENST00000533149 APOBEC3DQ96AK3 386 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC4-213ENST00000533149 GAL3ST1Q99999 423 aa9.49□□□□□ -0.89
TRAPPC4-213ENST00000533149 EIF3KQ9UBQ5 218 aaKnown RBP9.49□□□□□ -0.89
TRAPPC4-213ENST00000533149 DUSP13Q9UII6 198 aa9.49□□□□□ -0.89
TRAPPC4-213ENST00000533149 WNK2Q9Y3S1 2297 aa9.48□□□□□ -0.89
TRAPPC4-213ENST00000533149 IGHV1-69-2A0A0G2JMI3 117 aa9.48□□□□□ -0.89
TRAPPC4-213ENST00000533149 CLPSL1A2RUU4 121 aa9.48□□□□□ -0.89
TRAPPC4-213ENST00000533149 SMIM30A4D0T7 59 aa9.48□□□□□ -0.89
TRAPPC4-213ENST00000533149 CD2P06729 351 aa9.48□□□□□ -0.89
TRAPPC4-213ENST00000533149 ZNF35P13682 527 aa9.48□□□□□ -0.89
TRAPPC4-213ENST00000533149 ZNF12P17014 697 aa9.48□□□□□ -0.89
TRAPPC4-213ENST00000533149 WNT5AP41221 380 aa9.48□□□□□ -0.89
TRAPPC4-213ENST00000533149 RORCP51449 518 aa9.48□□□□□ -0.89
TRAPPC4-213ENST00000533149 CAV3P56539 151 aa9.48□□□□□ -0.89
TRAPPC4-213ENST00000533149 SELENOVP59797 346 aa9.48□□□□□ -0.89
TRAPPC4-213ENST00000533149 NKPD1Q17RQ9 610 aa9.48□□□□□ -0.89
TRAPPC4-213ENST00000533149 HFEQ30201 348 aa9.48□□□□□ -0.89
TRAPPC4-213ENST00000533149 BEAN1Q3B7T3 259 aa9.48□□□□□ -0.89
TRAPPC4-213ENST00000533149 KLF17Q5JT82 389 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC4-213ENST00000533149 Q6ZSR3 168 aa9.48□□□□□ -0.89
TRAPPC4-213ENST00000533149 LRP11Q86VZ4 500 aa9.48□□□□□ -0.89
TRAPPC4-213ENST00000533149 OR2AE1Q8NHA4 323 aa9.48□□□□□ -0.89
TRAPPC4-213ENST00000533149 ADAT3Q96EY9 351 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC4-213ENST00000533149 REEP6Q96HR9 211 aa9.48□□□□□ -0.89
TRAPPC4-213ENST00000533149 RGCCQ9H4X1 137 aa9.48□□□□□ -0.89
TRAPPC4-213ENST00000533149 TCF7L1Q9HCS4 588 aa9.48□□□□□ -0.89
TRAPPC4-213ENST00000533149 TBCCD1Q9NVR7 557 aa9.48□□□□□ -0.89
TRAPPC4-213ENST00000533149 NKIRAS2Q9NYR9 191 aa9.48□□□□□ -0.89
TRAPPC4-213ENST00000533149 PTTG3PQ9NZH4 202 aa9.48□□□□□ -0.89
TRAPPC4-213ENST00000533149 MYEF2Q9P2K5 600 aaKnown RBP9.48□□□□□ -0.89
TRAPPC4-213ENST00000533149 PURGQ9UJV8 347 aaKnown RBP9.48□□□□□ -0.89
TRAPPC4-213ENST00000533149 V9GYS6 101 aa9.48□□□□□ -0.89
TRAPPC4-213ENST00000533149 TRAV8-7A0A075B6U6 113 aa9.47□□□□□ -0.89
TRAPPC4-213ENST00000533149 FAM181BA6NEQ2 426 aa9.47□□□□□ -0.89
TRAPPC4-213ENST00000533149 A6NIN4 97 aa9.47□□□□□ -0.89
TRAPPC4-213ENST00000533149 C17orf100A8MU93 164 aa9.47□□□□□ -0.89
TRAPPC4-213ENST00000533149 XRCC2O43543 280 aa9.47□□□□□ -0.89
TRAPPC4-213ENST00000533149 MTRF1O75570 445 aaKnown RBP9.47□□□□□ -0.89
TRAPPC4-213ENST00000533149 NDUFA7O95182 113 aa9.47□□□□□ -0.89
TRAPPC4-213ENST00000533149 VSIG8P0DPA2 414 aa9.47□□□□□ -0.89
TRAPPC4-213ENST00000533149 SELEP16581 610 aa9.47□□□□□ -0.89
TRAPPC4-213ENST00000533149 ZNF20P17024 532 aa9.47□□□□□ -0.89
TRAPPC4-213ENST00000533149 CCL8P80075 99 aa9.47□□□□□ -0.89
TRAPPC4-213ENST00000533149 ZNF92Q03936 586 aa9.47□□□□□ -0.89
TRAPPC4-213ENST00000533149 MALLQ13021 153 aa9.47□□□□□ -0.89
TRAPPC4-213ENST00000533149 ZNF154Q13106 437 aa9.47□□□□□ -0.89
TRAPPC4-213ENST00000533149 PDCD1Q15116 288 aa9.47□□□□□ -0.89
TRAPPC4-213ENST00000533149 CEP78Q5JTW2 689 aa9.47□□□□□ -0.89
TRAPPC4-213ENST00000533149 C9orf139Q6ZV77 190 aa9.47□□□□□ -0.89
TRAPPC4-213ENST00000533149 LRRTM1Q86UE6 522 aa9.47□□□□□ -0.89
TRAPPC4-213ENST00000533149 PARP16Q8N5Y8 322 aa9.47□□□□□ -0.89
TRAPPC4-213ENST00000533149 OR5L1Q8NGL2 311 aa9.47□□□□□ -0.89
TRAPPC4-213ENST00000533149 SPSB4Q96A44 273 aa9.47□□□□□ -0.89
TRAPPC4-213ENST00000533149 SLC25A46Q96AG3 418 aa9.47□□□□□ -0.89
TRAPPC4-213ENST00000533149 SLC30A2Q9BRI3 323 aa9.47□□□□□ -0.89
TRAPPC4-213ENST00000533149 MRI1Q9BV20 369 aa9.47□□□□□ -0.89
TRAPPC4-213ENST00000533149 BARHL1Q9BZE3 327 aa9.47□□□□□ -0.89
TRAPPC4-213ENST00000533149 OR51B6Q9H340 312 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms