RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 CSF3P09919 207 aa10.56□□□□□ -0.72
COPB1-208ENST00000532088 ZNF93P35789 620 aaPredicted RBP10.56□□□□□ -0.72
COPB1-208ENST00000532088 PTH2RP49190 550 aa10.56□□□□□ -0.72
COPB1-208ENST00000532088 MTCP1P56278 107 aa10.56□□□□□ -0.72
COPB1-208ENST00000532088 RIN1Q13671 783 aa10.56□□□□□ -0.72
COPB1-208ENST00000532088 KISS1Q15726 138 aa10.56□□□□□ -0.72
COPB1-208ENST00000532088 DEFB113Q30KQ7 82 aa10.56□□□□□ -0.72
COPB1-208ENST00000532088 DDI2Q5TDH0 399 aa10.56□□□□□ -0.72
COPB1-208ENST00000532088 GPR107Q5VW38 600 aa10.56□□□□□ -0.72
COPB1-208ENST00000532088 C1orf87Q8N0U7 546 aa10.56□□□□□ -0.72
COPB1-208ENST00000532088 PNLDC1Q8NA58 520 aaKnown RBP10.56□□□□□ -0.72
COPB1-208ENST00000532088 PXT1Q8NFP0 134 aa10.56□□□□□ -0.72
COPB1-208ENST00000532088 OR52N4Q8NGI2 321 aa10.56□□□□□ -0.72
COPB1-208ENST00000532088 OR11L1Q8NGX0 322 aa10.56□□□□□ -0.72
COPB1-208ENST00000532088 CENPOQ9BU64 300 aa10.56□□□□□ -0.72
COPB1-208ENST00000532088 GCM1Q9NP62 436 aa10.56□□□□□ -0.72
COPB1-208ENST00000532088 PLEKHA6Q9Y2H5 1048 aa10.56□□□□□ -0.72
COPB1-208ENST00000532088 HRNRQ86YZ3 2850 aaPredicted RBP10.55□□□□□ -0.72
COPB1-208ENST00000532088 IGKV1-27A0A075B6S5 117 aa10.55□□□□□ -0.72
COPB1-208ENST00000532088 LRRC30A6NM36 301 aa10.55□□□□□ -0.72
COPB1-208ENST00000532088 NOL3O60936 208 aaKnown RBP10.55□□□□□ -0.72
COPB1-208ENST00000532088 NOS1APO75052 506 aaPredicted RBP10.55□□□□□ -0.72
COPB1-208ENST00000532088 RP2O75695 350 aa10.55□□□□□ -0.72
COPB1-208ENST00000532088 IL1AP01583 271 aa10.55□□□□□ -0.72
COPB1-208ENST00000532088 ADRA2CP18825 462 aa10.55□□□□□ -0.72
COPB1-208ENST00000532088 RAB3BP20337 219 aa10.55□□□□□ -0.72
COPB1-208ENST00000532088 HAAOP46952 286 aa10.55□□□□□ -0.72
COPB1-208ENST00000532088 ZP1P60852 638 aa10.55□□□□□ -0.72
COPB1-208ENST00000532088 PDZK1IP1Q13113 114 aa10.55□□□□□ -0.72
COPB1-208ENST00000532088 CTF1Q16619 201 aa10.55□□□□□ -0.72
COPB1-208ENST00000532088 HFEQ30201 348 aa10.55□□□□□ -0.72
COPB1-208ENST00000532088 C1orf100Q5SVJ3 147 aa10.55□□□□□ -0.72
COPB1-208ENST00000532088 CRIP3Q6Q6R5 217 aa10.55□□□□□ -0.72
COPB1-208ENST00000532088 ASCL4Q6XD76 172 aa10.55□□□□□ -0.72
COPB1-208ENST00000532088 CLVS1Q8IUQ0 354 aaPredicted RBP10.55□□□□□ -0.72
COPB1-208ENST00000532088 C11orf53Q8IXP5 236 aa10.55□□□□□ -0.72
COPB1-208ENST00000532088 MKXQ8IYA7 352 aa10.55□□□□□ -0.72
COPB1-208ENST00000532088 SCCPDHQ8NBX0 429 aa10.55□□□□□ -0.72
COPB1-208ENST00000532088 ZNF671Q8TAW3 534 aa10.55□□□□□ -0.72
COPB1-208ENST00000532088 TRMT10AQ8TBZ6 339 aaKnown RBP10.55□□□□□ -0.72
COPB1-208ENST00000532088 AQP3Q92482 292 aa10.55□□□□□ -0.72
COPB1-208ENST00000532088 NRGNQ92686 78 aa10.55□□□□□ -0.72
COPB1-208ENST00000532088 RPL3LQ92901 407 aaKnown RBP10.55□□□□□ -0.72
COPB1-208ENST00000532088 ORAI1Q96D31 301 aa10.55□□□□□ -0.72
COPB1-208ENST00000532088 GHRLQ9UBU3 117 aa10.55□□□□□ -0.72
COPB1-208ENST00000532088 PPP1R3CQ9UQK1 317 aa10.55□□□□□ -0.72
COPB1-208ENST00000532088 SHISA3A0PJX4 238 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 A6NLC8 198 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 NDUFS8O00217 210 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 SLC22A1O15245 554 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 CYB5AP00167 134 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 IGHV4-39P01824 125 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 MAS1P04201 325 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 GRPP07492 148 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 IRF2P14316 349 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 DAOP14920 347 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 BMXP51813 675 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 CAPZA1P52907 286 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 ATP5J2P56134 94 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 TMEM33P57088 247 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 DSCR9P59020 149 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 MPPED2Q15777 294 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 SPRNQ5BIV9 151 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 PRAMEF6Q5VXH4 476 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 HAGHLQ6PII5 290 aaPredicted RBP10.54□□□□□ -0.72
COPB1-208ENST00000532088 PRSS57Q6UWY2 283 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 WDR82Q6UXN9 313 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 CDH24Q86UP0 819 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 MOGAT3Q86VF5 341 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 CALHM1Q8IU99 346 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 CROCCP3Q8IVE0 287 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 Q8IYB0 196 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 NPRL2Q8WTW4 380 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 RBM38Q9H0Z9 239 aaKnown RBP10.54□□□□□ -0.72
COPB1-208ENST00000532088 C7orf69Q9H7B7 122 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 CHODLQ9H9P2 273 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 PCDHB16Q9NRJ7 776 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 TMEM106BQ9NUM4 274 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 RASL12Q9NYN1 266 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 IL36GQ9NZH8 169 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 RNF7Q9UBF6 113 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 NPTNQ9Y639 398 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 CEPT1Q9Y6K0 416 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 V9GY05 133 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 TANC2Q9HCD6 1990 aa10.54□□□□□ -0.72
COPB1-208ENST00000532088 UTP20O75691 2785 aaKnown RBP10.53□□□□□ -0.72
COPB1-208ENST00000532088 NOTOA8MTQ0 251 aa10.53□□□□□ -0.72
COPB1-208ENST00000532088 SRRM5B3KS81 715 aa10.53□□□□□ -0.72
COPB1-208ENST00000532088 SLC17A2O00624 439 aa10.53□□□□□ -0.72
COPB1-208ENST00000532088 CDIPTO14735 213 aa10.53□□□□□ -0.72
COPB1-208ENST00000532088 ZNF780AO75290 641 aaPredicted RBP10.53□□□□□ -0.72
COPB1-208ENST00000532088 LHBP01229 141 aa10.53□□□□□ -0.72
COPB1-208ENST00000532088 UBBP0CG47 229 aa10.53□□□□□ -0.72
COPB1-208ENST00000532088 PGA5P0DJD9 388 aa10.53□□□□□ -0.72
COPB1-208ENST00000532088 SDC2P34741 201 aa10.53□□□□□ -0.72
COPB1-208ENST00000532088 PMELP40967 661 aa10.53□□□□□ -0.72
COPB1-208ENST00000532088 PTGFRP43088 359 aa10.53□□□□□ -0.72
COPB1-208ENST00000532088 GPR176Q14439 515 aa10.53□□□□□ -0.72
COPB1-208ENST00000532088 FAM166AQ6J272 317 aa10.53□□□□□ -0.72
COPB1-208ENST00000532088 USP43Q70EL4 1123 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms