RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 ZP3P21754 424 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 CXCR2P25025 360 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 CYB561P49447 251 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 GSK3BP49841 420 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 HLCSP50747 726 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 HMGA2P52926 109 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 PGGT1BP53609 377 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 ERVK11-1P61568 191 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 UBA52P62987 128 aaKnown RBP4.32□□□□□ -1.72
PABPC1-223ENST00000523636 CDKL1Q00532 357 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 DHODHQ02127 395 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 APOFQ13790 326 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 SLC9A3R2Q15599 337 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 ODF4Q2M2E3 257 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 RFX4Q33E94 735 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 KRTAP15-1Q3LI76 137 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 LY6G6FQ5SQ64 297 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 MEDAGQ5VYS4 303 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 ANKRD26P1Q6NSI1 321 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 GOLGA7Q7Z5G4 137 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 IFNEQ86WN2 208 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.32□□□□□ -1.72
PABPC1-223ENST00000523636 METTL4Q8N3J2 472 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 SVOPLQ8N434 492 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 CBR4Q8N4T8 237 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 C2orf73Q8N5S3 287 aaPredicted RBP4.32□□□□□ -1.72
PABPC1-223ENST00000523636 PNLDC1Q8NA58 520 aaKnown RBP4.32□□□□□ -1.72
PABPC1-223ENST00000523636 OR2M7Q8NG81 312 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 OR9I1Q8NGQ6 314 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 GRPEL2Q8TAA5 225 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 HMGCLL1Q8TB92 370 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 HIST1H2ACQ93077 130 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 RNF183Q96D59 192 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 FBXO17Q96EF6 278 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 AURKBQ96GD4 344 aaPredicted RBP4.32□□□□□ -1.72
PABPC1-223ENST00000523636 MBOAT4Q96T53 435 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 RSG1Q9BU20 258 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 PRRG4Q9BZD6 226 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 HOXD1Q9GZZ0 328 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 TUBB1Q9H4B7 451 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 EGLN3Q9H6Z9 239 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 Q9H8V8 135 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 PLEKHA1Q9HB21 404 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 HRASLSQ9HDD0 168 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 OPTCQ9UBM4 332 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 KIF25Q9UIL4 384 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 OARD1Q9Y530 152 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 APOBP04114 4563 aaKnown RBP4.31□□□□□ -1.72
PABPC1-223ENST00000523636 GLYATL1P3A0A0U1RQE8 302 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 A0A1B0GUS0 222 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 EVPLLA8MZ36 301 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 ATP6V1G2-DDX39BF2Z307 99 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 G3V2T6 193 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 G3V3Y1 287 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 C3orf84H3BNL1 204 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 H3BSA7 217 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 M0R3G1 203 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 ARPC2O15144 300 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 SRPX2O60687 465 aaPredicted RBP4.31□□□□□ -1.72
PABPC1-223ENST00000523636 STK16O75716 305 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 POP7O75817 140 aaKnown RBP4.31□□□□□ -1.72
PABPC1-223ENST00000523636 RCBTB2O95199 551 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 FARS2O95363 451 aaKnown RBP4.31□□□□□ -1.72
PABPC1-223ENST00000523636 C8GP07360 202 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 MELTFP08582 738 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 OR56A5P0C7T3 313 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 PIRTP0C851 137 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 CT45A8P0DMV1 189 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 CT45A9P0DMV2 189 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 RNH1P13489 461 aaKnown RBP4.31□□□□□ -1.72
PABPC1-223ENST00000523636 ATP6V1B2P21281 511 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 EPHA2P29317 976 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 S100A3P33764 101 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 CSNK1A1P48729 337 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 EFNB2P52799 333 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 DIO3P55073 304 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 FOXA1P55317 472 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 RAG2P55895 527 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 TMEM33P57088 247 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 EWSR1Q01844 656 aaKnown RBP eCLIP4.31□□□□□ -1.72
PABPC1-223ENST00000523636 IL18R1Q13478 541 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 AQP6Q13520 282 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 SLC10A1Q14973 349 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 ARL6IP1Q15041 203 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 DUSP7Q16829 419 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 SLC36A2Q495M3 483 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 SYTL3Q4VX76 610 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 AKIRIN2Q53H80 203 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 PAN3Q58A45 887 aaKnown RBP4.31□□□□□ -1.72
PABPC1-223ENST00000523636 SYT14P1Q58G82 188 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 CT45A2Q5DJT8 189 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 RBM48Q5RL73 367 aaKnown RBP4.31□□□□□ -1.72
PABPC1-223ENST00000523636 CYHR1Q6ZMK1 362 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 ZNF788Q6ZQV5 615 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 Q6ZSR9 355 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 ZNF621Q6ZSS3 439 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 RPS27LQ71UM5 84 aaKnown RBP4.31□□□□□ -1.72
PABPC1-223ENST00000523636 SLC16A14Q7RTX9 510 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 P4HA3Q7Z4N8 544 aa4.31□□□□□ -1.72
PABPC1-223ENST00000523636 S100A7AQ86SG5 101 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms