RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, human

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-222	ENST00000520400	MTFP1	Q9UDX5	166 aa		2.57	□□□□□ -2
CTNNA1-222	ENST00000520400	ZNF835	Q9Y2P0	537 aa		2.57	□□□□□ -2
CTNNA1-222	ENST00000520400	COQ4	Q9Y3A0	265 aa		2.57	□□□□□ -2
CTNNA1-222	ENST00000520400	TMED5	Q9Y3A6	229 aa		2.57	□□□□□ -2
CTNNA1-222	ENST00000520400	USP9Y	O00507	2555 aa	Predicted RBP	2.57	□□□□□ -2
CTNNA1-222	ENST00000520400	CLUH	O75153	1309 aa		2.57	□□□□□ -2
CTNNA1-222	ENST00000520400	HIVEP3	Q5T1R4	2406 aa		2.57	□□□□□ -2
CTNNA1-222	ENST00000520400	FLNA	P21333	2647 aa	Known RBP	2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	GOLGA4	Q13439	2230 aa	Known RBP	2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	KNL1	Q8NG31	2342 aa		2.56	□□□□□ -2
CTNNA1-222	ENST00000520400		A0A0U1RQV1	116 aa		2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	SERTM2	A0A1B0GWG4	89 aa		2.56	□□□□□ -2
CTNNA1-222	ENST00000520400		F8VZ95	297 aa		2.56	□□□□□ -2
CTNNA1-222	ENST00000520400		H7C1H1	209 aa		2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	SLC9A3R1	O14745	358 aa	Predicted RBP	2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	AQP8	O94778	261 aa		2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	TPM3	P06753	285 aa		2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	CD3G	P09693	182 aa		2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	RAB3B	P20337	219 aa		2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	OTX1	P32242	354 aa	Predicted RBP	2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	TUFM	P49411	452 aa	Known RBP	2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	STXBP1	P61764	594 aa	Known RBP	2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	RPL10A	P62906	217 aa	Known RBP	2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	IRF8	Q02556	426 aa		2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	INCA1	Q0VD86	236 aa		2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	ADIG	Q0VDE8	80 aa		2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	CDH17	Q12864	832 aa		2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	ITIH4	Q14624	930 aa		2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	RCN1	Q15293	331 aa		2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	C12orf54	Q6X4T0	127 aa		2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	TMEM150A	Q86TG1	271 aa		2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	UNC93A	Q86WB7	457 aa		2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	PQLC3	Q8N755	202 aa		2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	ZNF709	Q8N972	641 aa		2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	OR8U1	Q8NH10	309 aa		2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	FGF13	Q92913	245 aa		2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	FOPNL	Q96NB1	174 aa		2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	NDFIP1	Q9BT67	221 aa		2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	ULBP1	Q9BZM6	244 aa		2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	HAUS4	Q9H6D7	363 aa		2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	EDA2R	Q9HAV5	297 aa		2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	CYTL1	Q9NRR1	136 aa		2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	PLXNA2	O75051	1894 aa		2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	ANKHD1	Q8IWZ3	2542 aa	Known RBP	2.56	□□□□□ -2
CTNNA1-222	ENST00000520400	OTOG	Q6ZRI0	2925 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	BOD1L1	Q8NFC6	3051 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400		A0A075B6Q4	140 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	TRAV19	A0A0A6YYK7	116 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	GOLGA6L7	A0A1B0GV03	622 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	NDUFAB1	O14561	156 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	TRDMT1	O14717	391 aa	Known RBP	2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	WBP4	O75554	376 aa	Known RBP	2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	CTAG2	O75638	210 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	AGT	P01019	485 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	KRT14	P02533	472 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	GYPC	P04921	128 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	ARG1	P05089	322 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	PAEP	P09466	180 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	TPM1	P09493	284 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	HMGA1	P17096	107 aa	Known RBP	2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	HOXB8	P17481	243 aa	Predicted RBP	2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	CTRB1	P17538	263 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	CSNK2A2	P19784	350 aa	Predicted RBP	2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	TCN2	P20062	427 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	GTF2E2	P29084	291 aa	Known RBP	2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	RRM2	P31350	389 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	BMI1	P35226	326 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	CX3CR1	P49238	355 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	LRBA	P50851	2863 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	C21orf59	P57076	290 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	UBE2M	P61081	183 aa	Known RBP	2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	FAM78A	Q5JUQ0	283 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	FAM71E1	Q6IPT2	247 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	TPGS1	Q6ZTW0	290 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	FAM183BP	Q6ZVS7	135 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	KRTAP5-5	Q701N2	237 aa	Predicted RBP	2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	KRTAP5-2	Q701N4	177 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	FAM71A	Q8IYT1	594 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	DEFB106A	Q8N104	65 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	OR56A4	Q8NGH8	313 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	OR6N1	Q8NGY5	312 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	OR52E5	Q8NH55	327 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	JOSD2	Q8TAC2	188 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	CIRBP-AS1	Q8TBR5	109 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	PIFO	Q8TCI5	191 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	C2orf15	Q8WU43	125 aa	Known RBP	2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	LRRC29	Q8WV35	223 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	SEH1L	Q96EE3	360 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	GALNT14	Q96FL9	552 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	ACTR3C	Q9C0K3	210 aa	Predicted RBP	2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	SLC7A5P2	Q9GIP4	190 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	CCDC59	Q9P031	241 aa	Known RBP	2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	TFR2	Q9UP52	801 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	CCL26	Q9Y258	94 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	SNX10	Q9Y5X0	201 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	COMMD3-BMI1	R4GMX3	469 aa		2.55	□□□□□ -2
CTNNA1-222	ENST00000520400	SCN8A	Q9UQD0	1980 aa		2.54	□□□□□ -2
CTNNA1-222	ENST00000520400	TNRC6B	Q9UPQ9	1833 aa	Known RBP	2.54	□□□□□ -2
CTNNA1-222	ENST00000520400	IGKV2-28	A0A075B6P5	120 aa		2.54	□□□□□ -2
CTNNA1-222	ENST00000520400		A0A087X0T9	212 aa		2.54	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms