RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 OR3A4PP47883 348 aa8.3□□□□□ -1.08
CLN8-202ENST00000517514 NPBWR2P48146 333 aa8.3□□□□□ -1.08
CLN8-202ENST00000517514 RBP2P50120 134 aa8.3□□□□□ -1.08
CLN8-202ENST00000517514 ATP1B3P54709 279 aa8.3□□□□□ -1.08
CLN8-202ENST00000517514 MTCP1P56278 107 aa8.3□□□□□ -1.08
CLN8-202ENST00000517514 OR10A3P58181 314 aa8.3□□□□□ -1.08
CLN8-202ENST00000517514 PDZK1IP1Q13113 114 aa8.3□□□□□ -1.08
CLN8-202ENST00000517514 BLMHQ13867 455 aa8.3□□□□□ -1.08
CLN8-202ENST00000517514 C1orf100Q5SVJ3 147 aa8.3□□□□□ -1.08
CLN8-202ENST00000517514 DDI2Q5TDH0 399 aa8.3□□□□□ -1.08
CLN8-202ENST00000517514 GPR107Q5VW38 600 aa8.3□□□□□ -1.08
CLN8-202ENST00000517514 ASCL4Q6XD76 172 aa8.3□□□□□ -1.08
CLN8-202ENST00000517514 LHFPL2Q6ZUX7 228 aa8.3□□□□□ -1.08
CLN8-202ENST00000517514 BATF2Q8N1L9 274 aa8.3□□□□□ -1.08
CLN8-202ENST00000517514 C19orf18Q8NEA5 215 aa8.3□□□□□ -1.08
CLN8-202ENST00000517514 OR4D6Q8NGJ1 314 aa8.3□□□□□ -1.08
CLN8-202ENST00000517514 OR5D18Q8NGL1 313 aa8.3□□□□□ -1.08
CLN8-202ENST00000517514 OR10Z1Q8NGY1 313 aa8.3□□□□□ -1.08
CLN8-202ENST00000517514 C10orf105Q8TEF2 133 aa8.3□□□□□ -1.08
CLN8-202ENST00000517514 CCL17Q92583 94 aa8.3□□□□□ -1.08
CLN8-202ENST00000517514 THRSPQ92748 146 aa8.3□□□□□ -1.08
CLN8-202ENST00000517514 ERGIC1Q969X5 290 aa8.3□□□□□ -1.08
CLN8-202ENST00000517514 SLC25A28Q96A46 364 aa8.3□□□□□ -1.08
CLN8-202ENST00000517514 BORCS8Q96FH0 119 aa8.3□□□□□ -1.08
CLN8-202ENST00000517514 RBM38Q9H0Z9 239 aaKnown RBP8.3□□□□□ -1.08
CLN8-202ENST00000517514 CNTD2Q9H8S5 307 aa8.3□□□□□ -1.08
CLN8-202ENST00000517514 EXOSC4Q9NPD3 245 aaKnown RBP8.3□□□□□ -1.08
CLN8-202ENST00000517514 SNTG1Q9NSN8 517 aa8.3□□□□□ -1.08
CLN8-202ENST00000517514 SSR3Q9UNL2 185 aa8.3□□□□□ -1.08
CLN8-202ENST00000517514 AK6Q9Y3D8 172 aaKnown RBP8.3□□□□□ -1.08
CLN8-202ENST00000517514 CEPT1Q9Y6K0 416 aa8.3□□□□□ -1.08
CLN8-202ENST00000517514 NOTCH2Q04721 2471 aa8.3□□□□□ -1.08
CLN8-202ENST00000517514 ANK3Q12955 4377 aaKnown RBP8.29□□□□□ -1.08
CLN8-202ENST00000517514 LOC100506127A0A0U1RQW1 187 aa8.29□□□□□ -1.08
CLN8-202ENST00000517514 SMIM30A4D0T7 59 aa8.29□□□□□ -1.08
CLN8-202ENST00000517514 A6NLC8 198 aa8.29□□□□□ -1.08
CLN8-202ENST00000517514 SRRM5B3KS81 715 aa8.29□□□□□ -1.08
CLN8-202ENST00000517514 AKR7A2O43488 359 aa8.29□□□□□ -1.08
CLN8-202ENST00000517514 ARL6IP5O75915 188 aa8.29□□□□□ -1.08
CLN8-202ENST00000517514 ZNF205O95201 554 aa8.29□□□□□ -1.08
CLN8-202ENST00000517514 PLATP00750 562 aa8.29□□□□□ -1.08
CLN8-202ENST00000517514 IGHV2-70P01814 119 aa8.29□□□□□ -1.08
CLN8-202ENST00000517514 TFF1P04155 84 aa8.29□□□□□ -1.08
CLN8-202ENST00000517514 ACAA1P09110 424 aaPredicted RBP8.29□□□□□ -1.08
CLN8-202ENST00000517514 PGA5P0DJD9 388 aa8.29□□□□□ -1.08
CLN8-202ENST00000517514 CD80P33681 288 aa8.29□□□□□ -1.08
CLN8-202ENST00000517514 CAV3P56539 151 aa8.29□□□□□ -1.08
CLN8-202ENST00000517514 NCS1P62166 190 aa8.29□□□□□ -1.08
CLN8-202ENST00000517514 LSM3P62310 102 aaKnown RBP8.29□□□□□ -1.08
CLN8-202ENST00000517514 PPP3R1P63098 170 aa8.29□□□□□ -1.08
CLN8-202ENST00000517514 MZT1Q08AG7 82 aa8.29□□□□□ -1.08
CLN8-202ENST00000517514 IL24Q13007 206 aa8.29□□□□□ -1.08
CLN8-202ENST00000517514 ZMYND11Q15326 602 aa8.29□□□□□ -1.08
CLN8-202ENST00000517514 Q5PR19 223 aa8.29□□□□□ -1.08
CLN8-202ENST00000517514 GDPGP1Q6ZNW5 385 aa8.29□□□□□ -1.08
CLN8-202ENST00000517514 SLC25A26Q70HW3 274 aa8.29□□□□□ -1.08
CLN8-202ENST00000517514 GPR141Q7Z602 305 aa8.29□□□□□ -1.08
CLN8-202ENST00000517514 ZNF573Q86YE8 665 aa8.29□□□□□ -1.08
CLN8-202ENST00000517514 CDH26Q8IXH8 852 aa8.29□□□□□ -1.08
CLN8-202ENST00000517514 POC1AQ8NBT0 407 aa8.29□□□□□ -1.08
CLN8-202ENST00000517514 LRRC29Q8WV35 223 aa8.29□□□□□ -1.08
CLN8-202ENST00000517514 NRIP2Q9BQI9 281 aa8.29□□□□□ -1.08
CLN8-202ENST00000517514 CHODLQ9H9P2 273 aa8.29□□□□□ -1.08
CLN8-202ENST00000517514 FN3KRPQ9HA64 309 aa8.29□□□□□ -1.08
CLN8-202ENST00000517514 BARX1Q9HBU1 254 aaPredicted RBP8.29□□□□□ -1.08
CLN8-202ENST00000517514 HES4Q9HCC6 221 aa8.29□□□□□ -1.08
CLN8-202ENST00000517514 DLL4Q9NR61 685 aa8.29□□□□□ -1.08
CLN8-202ENST00000517514 RNF7Q9UBF6 113 aa8.29□□□□□ -1.08
CLN8-202ENST00000517514 IL36RNQ9UBH0 155 aa8.29□□□□□ -1.08
CLN8-202ENST00000517514 IGHV3OR15-7A0A075B7D8 119 aa8.28□□□□□ -1.08
CLN8-202ENST00000517514 KDM4BO94953 1096 aa8.28□□□□□ -1.08
CLN8-202ENST00000517514 CDRT1O95170 752 aa8.28□□□□□ -1.08
CLN8-202ENST00000517514 SFTPBP07988 381 aa8.28□□□□□ -1.08
CLN8-202ENST00000517514 ERCC1P07992 297 aaPredicted RBP8.28□□□□□ -1.08
CLN8-202ENST00000517514 BCL3P20749 454 aa8.28□□□□□ -1.08
CLN8-202ENST00000517514 SDC2P34741 201 aa8.28□□□□□ -1.08
CLN8-202ENST00000517514 ZNF93P35789 620 aaPredicted RBP8.28□□□□□ -1.08
CLN8-202ENST00000517514 PTGFRP43088 359 aa8.28□□□□□ -1.08
CLN8-202ENST00000517514 MTNR1BP49286 362 aa8.28□□□□□ -1.08
CLN8-202ENST00000517514 POU3F4P49335 361 aa8.28□□□□□ -1.08
CLN8-202ENST00000517514 PDLIM4P50479 330 aa8.28□□□□□ -1.08
CLN8-202ENST00000517514 ART1P52961 327 aa8.28□□□□□ -1.08
CLN8-202ENST00000517514 VBP1P61758 197 aa8.28□□□□□ -1.08
CLN8-202ENST00000517514 CLEC12BQ2HXU8 276 aa8.28□□□□□ -1.08
CLN8-202ENST00000517514 HFEQ30201 348 aa8.28□□□□□ -1.08
CLN8-202ENST00000517514 AVPI1Q5T686 147 aa8.28□□□□□ -1.08
CLN8-202ENST00000517514 PRSS57Q6UWY2 283 aa8.28□□□□□ -1.08
CLN8-202ENST00000517514 FAM90A1Q86YD7 464 aa8.28□□□□□ -1.08
CLN8-202ENST00000517514 WFDC11Q8NEX6 87 aa8.28□□□□□ -1.08
CLN8-202ENST00000517514 Q8NFD4 153 aa8.28□□□□□ -1.08
CLN8-202ENST00000517514 PXT1Q8NFP0 134 aa8.28□□□□□ -1.08
CLN8-202ENST00000517514 SLAMF9Q96A28 289 aa8.28□□□□□ -1.08
CLN8-202ENST00000517514 CYYR1Q96J86 154 aa8.28□□□□□ -1.08
CLN8-202ENST00000517514 BPESC1Q9GZL8 116 aa8.28□□□□□ -1.08
CLN8-202ENST00000517514 KCNK15Q9H427 330 aa8.28□□□□□ -1.08
CLN8-202ENST00000517514 TMEM165Q9HC07 324 aa8.28□□□□□ -1.08
CLN8-202ENST00000517514 TCF7L1Q9HCS4 588 aa8.28□□□□□ -1.08
CLN8-202ENST00000517514 MYOZ1Q9NP98 299 aaPredicted RBP8.28□□□□□ -1.08
CLN8-202ENST00000517514 RBFOX1Q9NWB1 397 aaKnown RBP8.28□□□□□ -1.08
CLN8-202ENST00000517514 CKLFQ9UBR5 152 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms